BAC Information

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BAC

Clone NameB6Ng01-211J18
Chromosome1 (Build37)
Map Location 64,999,178 - 65,167,393
singlet/doubletdoublet
Overlap gene9430067K14Rik, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik
Upstream geneOTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, LOC667245
Downstream geneIdh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211J18.bB6Ng01-211J18.g
ACCGA029630GA029631
length677555
definitionB6Ng01-211J18.b B6Ng01-211J18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,999,178 - 64,999,854)(65,166,833 - 65,167,393)
sequence
gaattcaggacagactggctgtaaacaagtctactagtccaaagctaacc
tgggctacacaagttccaggcctacctaggctctatcatgagaccatttc
ttagacaaaaattaattaaaattataaaaggaaaggaaaagagaataaga
aaaaaggaataagagtgctcttccaacagaagtctgcactgatcacacta
ctgagaaaccttgtgtgggcaatattctgttttcttttctttttttttta
agatttatttatttattatatgtaagtacactgtagctgtcttcagacac
accagatgagggcgtcagatctcgttacggatggttgtgagccaccatgt
ggttgctgggacttgaacacgacctttggaagagcagtcgggtactctta
cccactgagccatcacaccagcccagtattctgttttctacctcaatgtt
tttagaaagtttctctctgttttgtacctatattagttgtgaatttattg
ttctcattgttagtgcagggttttagattcaaaatgcattcactataatg
tagacaactttgaaacatttattgaacttcatggttataaaaaaaaagta
ctacacattgttcaggttttgaaaataaaggcaaaataaacaattcttat
ttaccctctaacgggggtggggggggg
agtttacaccctgcccatgtgttatcctcctgctaggagggatgtgtctc
ttttcctcagtttccctctgagtaacgccaagtttgtagctaagcctgcc
tctctgtgtgcccacatcacgaagaggcatcaaacagatcattactggac
ttctcaaactttaatgaggtattgttacagcgccatttctattctggagg
tcaaggctggctttgtatttctagtgagcacgaccagtgtgactaaccca
ggcatcaaactccagatgaggtttcaacagaatgaccagggtccaaaacc
cttatttattatttaggctggcatttattctctggagaatgtcattacat
gattgaggaattcttagaaccttaaacgaacccagatctacctttgtttg
cccagatgaggggtggaaagaaaatgttacaaataagtggtaagcatatt
tactaagtaaaaagttacaaacaaccaaggaaaaggtcatcactgtagta
agaatcaacatgcaaattgactctcagttttgtaccaggtgtgacagcaa
tggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64999178_64999854
seq2: B6Ng01-211J18.b_47_723

seq1  GAATTCAGGACAGACTGGCTGTAAACAAGTCTACTAGTCCAAAGCTAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACAGACTGGCTGTAAACAAGTCTACTAGTCCAAAGCTAACC  50

seq1  TGGGCTACACAAGTTCCAGGCCTACCTAGGCTCTATCATGAGACCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTACACAAGTTCCAGGCCTACCTAGGCTCTATCATGAGACCATTTC  100

seq1  TTAGACAAAAATTAATTAAAATTATAAAAGGAAAGGAAAAGAGAATAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAAAAATTAATTAAAATTATAAAAGGAAAGGAAAAGAGAATAAGA  150

seq1  AAAAAGGAATAAGAGTGCTCTTCCAACAGAAGTCTGCACTGATCACACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAATAAGAGTGCTCTTCCAACAGAAGTCTGCACTGATCACACTA  200

seq1  CTGAGAAACCTTGTGTGGGCAATATTCTGTTTTCTTTTCTTTTTTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAACCTTGTGTGGGCAATATTCTGTTTTCTTTTCTTTTTTTTTTA  250

seq1  AGATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAC  300

seq1  ACCAGATGAGGGCGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGATGAGGGCGTCAGATCTCGTTACGGATGGTTGTGAGCCACCATGT  350

seq1  GGTTGCTGGGACTTGAACACGACCTTTGGAAGAGCAGTCGGGTACTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCTGGGACTTGAACACGACCTTTGGAAGAGCAGTCGGGTACTCTTA  400

seq1  CCCACTGAGCCATCACACCAGCCCAGTATTCTGTTTTCTACCTCAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGCCATCACACCAGCCCAGTATTCTGTTTTCTACCTCAATGTT  450

seq1  TTTAGAAAGTTTCTCTCTGTTTTGTACCTATATTAGTTGTGAATTTATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGTTTCTCTCTGTTTTGTACCTATATTAGTTGTGAATTTATTG  500

seq1  TTCTCATTGTTAGTGCAGGGTTTTAGATTCAAAATGCATTCACTATAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATTGTTAGTGCAGGGTTTTAGATTCAAAATGCATTCACTATAATG  550

seq1  TAGACAACTTTGAAACATTTATTGAACTTCATGGTTATAAAAAAAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAACTTTGAAACATTTATTGAACTTCATGGTTATAAAAAAAAAGTA  600

seq1  CTACACATTGTTCAGGTTTTGAAAATAAAGGCAAAATAAACAATTCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATTGTTCAGGTTTTGAAAATAAAGGCAAAATAAACAATTCTTAT  650

seq1  TTACCCTCTAACGGGGGTGGGGGGGGG  677
      |||||||||||||||||||||||||||
seq2  TTACCCTCTAACGGGGGTGGGGGGGGG  677

seq1: chr1_65166833_65167393
seq2: B6Ng01-211J18.g_67_627 (reverse)

seq1  CTCCATTGCTGTCACACCTGGTACAAAACTGAGAGTCAATTTGCATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGCTGTCACACCTGGTACAAAACTGAGAGTCAATTTGCATGTTG  50

seq1  ATTCTTACTACAGTGATGACCTTTTCCTTGGTTGTTTGTAACTTTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTACTACAGTGATGACCTTTTCCTTGGTTGTTTGTAACTTTTTACT  100

seq1  TAGTAAATATGCTTACCACTTATTTGTAACATTTTCTTTCCACCCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATATGCTTACCACTTATTTGTAACATTTTCTTTCCACCCCTCAT  150

seq1  CTGGGCAAACAAAGGTAGATCTGGGTTCGTTTAAGGTTCTAAGAATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAACAAAGGTAGATCTGGGTTCGTTTAAGGTTCTAAGAATTCCT  200

seq1  CAATCATGTAATGACATTCTCCAGAGAATAAATGCCAGCCTAAATAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGTAATGACATTCTCCAGAGAATAAATGCCAGCCTAAATAATAA  250

seq1  ATAAGGGTTTTGGACCCTGGTCATTCTGTTGAAACCTCATCTGGAGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTTTTGGACCCTGGTCATTCTGTTGAAACCTCATCTGGAGTTTG  300

seq1  ATGCCTGGGTTAGTCACACTGGTCGTGCTCACTAGAAATACAAAGCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGGTTAGTCACACTGGTCGTGCTCACTAGAAATACAAAGCCAGC  350

seq1  CTTGACCTCCAGAATAGAAATGGCGCTGTAACAATACCTCATTAAAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCTCCAGAATAGAAATGGCGCTGTAACAATACCTCATTAAAGTTT  400

seq1  GAGAAGTCCAGTAATGATCTGTTTGATGCCTCTTCGTGATGTGGGCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTCCAGTAATGATCTGTTTGATGCCTCTTCGTGATGTGGGCACAC  450

seq1  AGAGAGGCAGGCTTAGCTACAAACTTGGCGTTACTCAGAGGGAAACTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCAGGCTTAGCTACAAACTTGGCGTTACTCAGAGGGAAACTGAG  500

seq1  GAAAAGAGACACATCCCTCCTAGCAGGAGGATAACACATGGGCAGGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGACACATCCCTCCTAGCAGGAGGATAACACATGGGCAGGGTGT  550

seq1  AAACTGAATTC  561
      |||||||||||
seq2  AAACTGAATTC  561