BAC Information

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BAC

Clone NameB6Ng01-211N03
Chromosome1 (Build37)
Map Location 31,129,247 - 31,130,560
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211N03.bB6Ng01-211N03.g
ACCGA029776GA029777
length1,0571,221
definitionB6Ng01-211N03.b B6Ng01-211N03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagacccatggacgctttcatctttgatgtagtcaaccagctg
agaaattctgacaccctttgcagagacagttagaatccatcttttcttcc
actgaagctggctgggttttgaccaataacgtccttgagtaaagtttagc
accaggggcactcagaacctttcagaggcagacagaagcctcaaagcttc
tagttttcttggaatgtttgcactctgagcttctcctcttgagataacca
tgtggtgacaccaggcagccatatcaacagtgtgcaggtgtgtggttctc
atagcccttcccatgcattgccagccagggttctccagtagcagtccaga
agagtctacagccatgcaaggagctttccaagctgccccaatactcttag
cacttcacacagtaagcagaatagaatggttgtgttaacactaaatacat
ggctttctgttacacctcagatttagtgtggctttgatcagacaactcta
gcaaccctgtcacagcaggctttgcctgatgatgttgtggacctacaagg
actggagaatcccatctggagatttttcagtaaacaagtggtgtaattat
gggtagcgctatgacatcaaggcgaactgctaatgattttgttgcttagt
gaagaatctccttaagcttctgttttatgtcttcatcacatctgacagaa
cagaaattacataatattcctttatctgcaccctgcacttgatctgagtt
atgtcagactgaaagggctggcgtgctacctactcggactttactaccca
cacactgccctttcccccttcctgggaaagtctgctggggattacaacat
tccccagatttcagcagcctctgctcttgctttgttctggagcagtctgt
actgagcatgggcctactggcatcgaaacttgtgtatgtcaaaatcctgt
tatttgttttaaacttagcttctattacttaagtttaatttagcacacaa
aaactcttcattattgaattctggtgctgacattctgttatttggggggg
ggggtgt

gaattccaagcccatgatcttgctcaaggacatttctaggactgttggaa
cactagcggaaggctttagccatgtcagaattcaatttttaaaagcactt
ataataggaaaatactgaaagagagcacatggatccatacactagactaa
cgtgggaatggaaaattaatgtatgggtagggaatgctagactccaggag
gagagcttccttgaaactcttttgcctcatgagtgacttttaagcctttc
agcttgtccagctgactcgaccagagagcgtggcatttctccctttcttt
ttttaattttcagcccaagtttcaggatgtcctgccttgtcatagctaca
gacctcaggagcactctaaagatgagtggaaacacaacgattactagtaa
aacaatgccaaaaataataacaagtaggattatatattgaacccaatcca
gggggttcaatgtgcttaggttgtttttcaaatctctagccaatttaatg
ttttaagtgtctaaatgacttttactaatatttgaaatttctgcctttaa
ctgttccaagtcatgagaaacatcatcatcttttcacactccctgtaagt
gggccttggtcctttcccaatcagtggttgtattataaggtaagggggtg
acacaaatgtactggaaagaagcatgacatttagtagctaacctggtctt
aatattagcaacatcttgccccattgctagcactacttcttctagggcgt
taacctttgcttccaattttttatctataatatgtagctctgacaggcta
cagagatgtttcttatgcatatcatttacaaaatgagcggtatgcagttg
ttagactaaaggctgtgatggacaatgcaaaagaagttaaaattgcaaat
taagggcagtaattcctaaaaatcaagtgctgctttcaaattctcttaag
gtctaaataaatttgtttaagtctttttaaaagtttgtaatcctgaattt
ttggaaccaaaggcacatttccttaactctacaggcagcaaaccataatt
agtccttttttaacaaaatccataacagtgagattttttttttatctcaa
ttaggattttaccacggtaggttcaattgacaagagtaacacattgcaag
tcacagcctggtccagatagtgtaccttgaactcttaaaaatgtatccta
tacgatatgatgccgatgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31129247_31130560
seq2: B6Ng01-211N03.b_45_1101

seq1  GAATTCCAAGACCCATGGACGCTTTCATCTTTGATGTAGTCAACCAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGACCCATGGACGCTTTCATCTTTGATGTAGTCAACCAGCTG  50

seq1  AGAAATTCTGACACCCTTTGCAGAGACAGTTAGAATCCATCTTTTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTCTGACACCCTTTGCAGAGACAGTTAGAATCCATCTTTTCTTCC  100

seq1  ACTGAAGCTGGCTGGGTTTTGACCAATAACGTCCTTGAGTAAAGTTTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCTGGCTGGGTTTTGACCAATAACGTCCTTGAGTAAAGTTTAGC  150

seq1  ACCAGGGGCACTCAGAACCTTTCAGAGGCAGACAGAAGCCTCAAAGCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGGCACTCAGAACCTTTCAGAGGCAGACAGAAGCCTCAAAGCTTC  200

seq1  TAGTTTTCTTGGAATGTTTGCACTCTGAGCTTCTCCTCTTGAGATAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTTGGAATGTTTGCACTCTGAGCTTCTCCTCTTGAGATAACCA  250

seq1  TGTGGTGACACCAGGCAGCCATATCAACAGTGTGCAGGTGTGTGGTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGACACCAGGCAGCCATATCAACAGTGTGCAGGTGTGTGGTTCTC  300

seq1  ATAGCCCTTCCCATGCATTGCCAGCCAGGGTTCTCCAGTAGCAGTCCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTTCCCATGCATTGCCAGCCAGGGTTCTCCAGTAGCAGTCCAGA  350

seq1  AGAGTCTACAGCCATGCAAGGAGCTTTCCAAGCTGCCCCAATACTCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTACAGCCATGCAAGGAGCTTTCCAAGCTGCCCCAATACTCTTAG  400

seq1  CACTTCACACAGTAAGCAGAATAGAATGGTTGTGTTAACACTAAATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACACAGTAAGCAGAATAGAATGGTTGTGTTAACACTAAATACAT  450

seq1  GGCTTTCTGTTACACCTCAGATTTAGTGTGGCTTTGATCAGACAACTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCTGTTACACCTCAGATTTAGTGTGGCTTTGATCAGACAACTCTA  500

seq1  GCAACCCTGTCACAGCAGGCTTTGCCTGATGATGTTGTGGACCTACAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTGTCACAGCAGGCTTTGCCTGATGATGTTGTGGACCTACAAGG  550

seq1  ACTGGAGAATCCCATCTGGAGATTTTTCAGTAAACAAGTGGTGTAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGAATCCCATCTGGAGATTTTTCAGTAAACAAGTGGTGTAATTAT  600

seq1  GGGTAGCGCTATGACATCAAGGCGAACTGCTAATGATTTTGTTGCTTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCGCTATGACATCAAGGCGAACTGCTAATGATTTTGTTGCTTAGT  650

seq1  GAAGAATCTCCTTAAGCTTCTGTTTTATGTCTTCATCACATCTGACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCTCCTTAAGCTTCTGTTTTATGTCTTCATCACATCTGACAGAA  700

seq1  CAGAAATTACATAATATTCCTTTATCTGCACCCTGCACTTGATCTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATTACATAATATTCCTTTATCTGCACCCTGCACTTGATCTGAGTT  750

seq1  ATGTCAGACTGAAAGGGCTGGCGTGCTACCTACTCGGACTTTACTACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGACTGAAAGGGCTGGCGTGCTACCTACTCGGACTTTACTACCCA  800

seq1  CACACTGCCCTTTCCCCCTTCCTGGGAAAGTCTGCT-GGGATTACAACAT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACACTGCCCTTTCCCCCTTCCTGGGAAAGTCTGCTGGGGATTACAACAT  850

seq1  TCCCCAGATTTCAGCAGCCTCTGCTCTTGCTTTGTTCTGGAGCAGTCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGATTTCAGCAGCCTCTGCTCTTGCTTTGTTCTGGAGCAGTCTGT  900

seq1  ACTGAGCAT-GGCCTACTGGCATCGAAACTTGTGTATGTCAAAATCCTGT  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCATGGGCCTACTGGCATCGAAACTTGTGTATGTCAAAATCCTGT  950

seq1  TATTTGTTTTAAACTTAGCTTCTATTACTTAAGTTTAATTTAGCACACAA  998
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATTTGTTTTAAACTTAGCTTCTATTACTTAAGTTTAATTTAGCACAC-A  999

seq1  AAAACTCTTCATTATTGAATTCT-GTGCTGACATTCTGTTATTT--GGGG  1045
      ||||||||||||||||||||||| ||||||||||||||||||||  ||||
seq2  AAAACTCTTCATTATTGAATTCTGGTGCTGACATTCTGTTATTTGGGGGG  1049

seq1  GGGGGTGTATTTAACTACCATTAGTCCAAATGTTAGAAATGTACTTCTGA  1095
      ||||||||                                          
seq2  GGGGGTGT------------------------------------------  1057

seq1  CCTGTCAAATTTCATACAAACATGTAATACACACTCATGCAATAATAGTA  1145
                                                        
seq2  --------------------------------------------------  1057

seq1  AATAAAAATAGACATAGAAGATATACAACTTTTAAGATTTTTTTTTTGTC  1195
                                                        
seq2  --------------------------------------------------  1057

seq1  TTGAGCCAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGGAACTCACTCTG  1245
                                                        
seq2  --------------------------------------------------  1057

seq1  TAGACCAGGATGGCATCGAACTCAAAAATTCACTTGTTTCTGCCTCCCAA  1295
                                                        
seq2  --------------------------------------------------  1057

seq1  GTGCTGGGATTAAAGGTGT  1314
                         
seq2  -------------------  1057


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