BAC Information

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BAC

Clone NameB6Ng01-212F14
Chromosome1 (Build37)
Map Location 85,279,234 - 85,329,808
singlet/doubletdoublet
Overlap geneLOC100040135, LOC639868
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12, Fbxo36, Slc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212F14.bB6Ng01-212F14.g
ACCGA030168GA030169
length1,136936
definitionB6Ng01-212F14.b B6Ng01-212F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,328,643 - 85,329,808)(85,279,234 - 85,280,169)
sequence
gaattcagatgtgtgtgtcataatattcacgaaagtcaaagtagagggca
accatgtgtgtgtttttccatctcagcttctttgagacaaggcaactgtc
gaccagagtggagtgcatgtagctttccacaggcttgaggggatctgaac
tcaagtcctctcacttgtgtggcaaacactgacccactgaggcaactccc
cagcccgagattgcttcttactccccgtagtcaagattctcagaaatacc
aaactctaaggtcctttacatgtgaatgaaccatgcacctaatggagtcc
ctcagagaatagaagtaccaagagggaggatgtgtttctgtcactgataa
tgagtaccatcattcttgtctacattatggttttttttttttttttagga
ccctaagtttggcgaaatgggacttagactggagtccaaatttgagaagg
gtttcaaggaagtgtttgctattcaggaaacaaatgaaaagagttgactg
aaatcagagaaatggctggtgtcacctggccatgtctggctcacctgcag
cagcaatgagtgttctttatagactctatcattcccggatgattactctt
ggtcatatggaaacaggtgcagctaggagttacacctcttggcctggggg
tccatccccttttctccccatgaaatcaagagtatggtgcattgctgctc
tctggtcttcaagggtctaggctggagcctgtctccagctggctttgctc
caccaccactgcaacccctccccccacatatatgttgcttttcttgtctc
ttactctcctgagagcaatccacaataaaccataagcttccaagacttca
aaccatgtggtggctcattcctgtagcttcagtccttgagaaggctgaag
gcaggaggatagctgcaaattgcaatgcgagcctgggctacaatagtgac
tctcagctaccttggctataaaaggtttctggaaaaaacaaaccactcat
caaatagacagaaaaaggctcctcaactcaggcctgtgtcaggaggactc
actataagataatgtccctaaaggcaagctcggtgggtcctaagggtaat
gtcactgtcctaccagtctcaggtaaccagcactgg
gaattctttataaaaagactgacagctctatgtgactataaaagactttg
ttttgttttcttcttagcaagaagaaaaaaacgtccgaactggtcaaatt
ccaaaagaggacggcagaaaaaaaagccccatcaagatgagatgatgggt
aaggggatgctggagaagactccagcaaggggtacaggaggaggcttcag
caaaggctgtagatctgatggagttcgttctgaactcactggataggcag
gcacacaggagttctggtcagcacagcgaactggctttaaatttcagcag
acctgttttgccactgagtaaatggtgaactggaacatgttggaatcctg
ttctgaggttacacagcccaaggtgaagggtgtagagtgtcaggtttcct
ctttatttatacacactaggatggcaaccatccttcctaactaaagggag
agtaaataaactttgctactttgagataaggtgcagaagagcctgggtcc
tagccctgagaggcagttcagaggaaaagcccccagaaaagcttcagaaa
ggtgttctcatgccagtggatgcagctgtccttggggaggcagcttccaa
agtcccgagaggaaaaagtgctgtgtcctcccctcctcagtgaaggccac
tcatccatccaccagtcctgtccactgcagagcctctgggcctctgccac
ccctcgcccagaagctgtcttcacgacaggcatagggctgtccctgcgat
ggtttagaggtgcccagtggccttcgggtgttgcctgtctgaacatgggt
gctacatggaaagtccctttcttcactgcctgaagaatcccaggtctgtg
cctcatggtttacgagtcttaaaacaggaatcagaatctgccctgatccc
gaatccctccatattttattttattttggttaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_85328643_85329808
seq2: B6Ng01-212F14.b_47_1182 (reverse)

seq1  CCAGTGCTGGTTTAACACCTGAGAACCTTTGGTTAGACAGTGACA-TACC  49
      ||||||||||||    ||||||||     ||||  |||||||||| ||||
seq2  CCAGTGCTGGTT----ACCTGAGA----CTGGTAGGACAGTGACATTACC  42

seq1  TTGAGAACCCCACCCGAAGGCTTTGCCTCT-GGGACATTATCTTATAGTG  98
       | || ||||   ||||  || |||||| | |||||||||||||||||||
seq2  CTTAGGACCC--ACCGA--GC-TTGCCTTTAGGGACATTATCTTATAGTG  87

seq1  AGTCTTCCTAGACACAGGCCCTGAGTTGA-GAGCCTTTTTCTGTCTTATT  147
      |||| |||| |||||||| |||||||||| ||||||||||||||| ||||
seq2  AGTCCTCCT-GACACAGG-CCTGAGTTGAGGAGCCTTTTTCTGTC-TATT  134

seq1  TGATGAGTGGTTTGTTTTTTCCAGAAACCTTTATAAGCCAGGGTAGCTGA  197
      ||||||||||||||||||||||||||||||||   ||||| |||||||||
seq2  TGATGAGTGGTTTGTTTTTTCCAGAAACCTTTTATAGCCAAGGTAGCTGA  184

seq1  GAGTCACTA-TGTAGCCCAGGCTCGCATTGC-ATTTGCAGCTATCCTCCT  245
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  GAGTCACTATTGTAGCCCAGGCTCGCATTGCAATTTGCAGCTATCCTCCT  234

seq1  GCC-TCAGCC-TCTCAAGGACTGAAGCTACAGGAATGAGCCACCACATGG  293
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAGCCTTCTCAAGGACTGAAGCTACAGGAATGAGCCACCACATGG  284

seq1  TTTGAAGTCTTGGAAGCTTATGGTTTATTGTGGATTGCTCTCAGGAGAGT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTCTTGGAAGCTTATGGTTTATTGTGGATTGCTCTCAGGAGAGT  334

seq1  AAGAGACAAGAAAAGCAACATATATGTGGGGGGAGGGGTTGGAGTGGTGG  393
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGAGACAAGAAAAGCAACATATATGTGGGGGGAGGGGTTGCAGTGGTGG  384

seq1  TGGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAAAGCCAGCTGGAGACAGGCTCCAGCCTAGACCCTTGAAGACCA  434

seq1  GAGAGCAGCAATGCACCATACTCTTGATTTCATGGGGAGAAAAGGGGATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGCAATGCACCATACTCTTGATTTCATGGGGAGAAAAGGGGATG  484

seq1  GACCCCCAGGCCAAGAGGTGTAACTCCTAGCTGCACCTGTTTCCATATGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCAGGCCAAGAGGTGTAACTCCTAGCTGCACCTGTTTCCATATGA  534

seq1  CCAAGAGTAATCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTAATCATCCGGGAATGATAGAGTCTATAAAGAACACTCATTGC  584

seq1  TGCTGCAGGTGAGCCAGACATGGCCAGGTGACACCAGCCATGTCTCTGAT  643
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCTGCAGGTGAGCCAGACATGGCCAGGTGACACCAGCCATTTCTCTGAT  634

seq1  TTCAGTCAACTCTTTTCATTTGTTTCCTGAATAGCAAACACTTCCTTGAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAACTCTTTTCATTTGTTTCCTGAATAGCAAACACTTCCTTGAA  684

seq1  ACCCTTCTCAAATTTGGACTCCAGTCTAAGTCCCATTTCGCCAAACTTAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTCAAATTTGGACTCCAGTCTAAGTCCCATTTCGCCAAACTTAG  734

seq1  GGTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATAAT  793
      ||||||                     |||||||||||||||| ||||||
seq2  GGTCCT---------------------AAAAAAAAAAAAAAAACCATAAT  763

seq1  GTAGACAAGAATGATGGTACTCATTATCAGTGACAGAAACACATCCTCCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAAGAATGATGGTACTCATTATCAGTGACAGAAACACATCCTCCC  813

seq1  TCTTGGTACTTCTATTCTCTGAGGGACTCCATTAGGTGCATGGTTCATTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTACTTCTATTCTCTGAGGGACTCCATTAGGTGCATGGTTCATTC  863

seq1  ACATGTAAAGGACCTTAGAGTTTGGTATTTCTGAGAATCTTGACTACGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAAGGACCTTAGAGTTTGGTATTTCTGAGAATCTTGACTACGGG  913

seq1  GAGTAAGAAGCAATCTCGGGCTGGGGAGTTGCCTCAGTGGGTCAGTGTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGAAGCAATCTCGGGCTGGGGAGTTGCCTCAGTGGGTCAGTGTTT  963

seq1  GCCACACAAGTGAGAGGACTTGAGTTCAGATCCCCTCAAGCCTGTGGAAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACAAGTGAGAGGACTTGAGTTCAGATCCCCTCAAGCCTGTGGAAA  1013

seq1  GCTACATGCACTCCACTCTGGTCGACAGTTGCCTTGTCTCAAAGAAGCTG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATGCACTCCACTCTGGTCGACAGTTGCCTTGTCTCAAAGAAGCTG  1063

seq1  AGATGGAAAAAAACACACATGGTTGCCCTCTACTTTGACTTTCGTGAATA  1143
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAAAAACACACACATGGTTGCCCTCTACTTTGACTTTCGTGAATA  1113

seq1  TTATGACACACACATCTGAATTC  1166
      |||||||||||||||||||||||
seq2  TTATGACACACACATCTGAATTC  1136

seq1: chr1_85279234_85280169
seq2: B6Ng01-212F14.g_67_1002

seq1  GAATTCTTTAAATAAAAAAGACTGACAGCTCTATGTGACTATAAAAGACT  50
      ||||||||||    ||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTA---TAAAAAGACTGACAGCTCTATGTGACTATAAAAGACT  47

seq1  TTGTTTTCTTTTCTTCTTAGCAAGAAGAAAAAAACATCCGAACTGGTCAA  100
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGTTTTGTTTTCTTCTTAGCAAGAAGAAAAAAACGTCCGAACTGGTCAA  97

seq1  ATTCCAAAAGAAGACAGCAGAAAAAAAAGCCCCGTCAAGATGAGATGATG  150
      ||||||||||| ||| ||||||||||||||||| ||||||||||||||||
seq2  ATTCCAAAAGAGGACGGCAGAAAAAAAAGCCCCATCAAGATGAGATGATG  147

seq1  GGTAAGGGGATGCTGGAGGAGACTCCAGCAAGGGGGTACAGGAGGAGGAT  200
      |||||||||||||||||| |||||||||||| |||||||||||||||| |
seq2  GGTAAGGGGATGCTGGAGAAGACTCCAGCAA-GGGGTACAGGAGGAGGCT  196

seq1  TCAGCAAAGGCTGTAGATCTGATGGAGTTCGTTCTGAACTCACTATATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TCAGCAAAGGCTGTAGATCTGATGGAGTTCGTTCTGAACTCACTGGATAG  246

seq1  GCAGGCACACAAGATTTCTTGTCAGCACAGCGAACTGGCTTTAAATTTCA  300
      ||||||||||| || |||| ||||||||||||||||||||||||||||||
seq2  GCAGGCACACAGGAGTTCTGGTCAGCACAGCGAACTGGCTTTAAATTTCA  296

seq1  CCAGACCTGTTTTGCCACTGAGTAAATGGTGAACTGGAACATGTTGGAAT  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACCTGTTTTGCCACTGAGTAAATGGTGAACTGGAACATGTTGGAAT  346

seq1  CCTGTTCTGAGGTTACACAGCCCAAGGTGAAGGGTGCAGAGTGTCAGGTT  400
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCTGTTCTGAGGTTACACAGCCCAAGGTGAAGGGTGTAGAGTGTCAGGTT  396

seq1  TCCTCTTTATTTATACACACTAGGATGGCATCCATCCTTCCTAACTAAAA  450
      |||||||||||||||||||||||||||||| |||||||||||||||||| 
seq2  TCCTCTTTATTTATACACACTAGGATGGCAACCATCCTTCCTAACTAAAG  446

seq1  GGAGAGTAAATAAACTTTGCTACTTTGAGATAAGGTGCAGAAGAGCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTAAATAAACTTTGCTACTTTGAGATAAGGTGCAGAAGAGCCTGG  496

seq1  GTCCTAGCCCTGAGAGGCAGTTCAGAGGAAAAGCCCCCAGAAAAGCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGCCCTGAGAGGCAGTTCAGAGGAAAAGCCCCCAGAAAAGCTTCA  546

seq1  GAAAGGTGTTCTCATGCCTGTGGATGCAGCTGTCCTTGGGGAGGCAGCTT  600
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAAAGGTGTTCTCATGCCAGTGGATGCAGCTGTCCTTGGGGAGGCAGCTT  596

seq1  CCAAAGTCCCGAGAGGAAAAAGTGCTGTGTCCTCCCCTCCTCAGTGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTCCCGAGAGGAAAAAGTGCTGTGTCCTCCCCTCCTCAGTGAAGG  646

seq1  CCACTCATCCATCCACCAGTCCTGTCCACTGCAGAGCCTCTGGGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATCCATCCACCAGTCCTGTCCACTGCAGAGCCTCTGGGCCTCTG  696

seq1  CCACCCCTCGCCCAGAAGCTGTCTTCACGACAGGCATAGGGCTGTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTCGCCCAGAAGCTGTCTTCACGACAGGCATAGGGCTGTCCCTG  746

seq1  CGATGCTTTAGAGGTGCCCAGTGGCCTTCGGGTGTTGCCTGTCTGAACAT  800
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGTTTAGAGGTGCCCAGTGGCCTTCGGGTGTTGCCTGTCTGAACAT  796

seq1  GGGTGCTACATGG-AAGTCCC-TTCCTCACTGCCTGAAAAATCCCAGGCC  848
      ||||||||||||| ||||||| ||| |||||||||||| ||||||||| |
seq2  GGGTGCTACATGGAAAGTCCCTTTCTTCACTGCCTGAAGAATCCCAGGTC  846

seq1  TGTGCCTCATGGTTTACGAGTCTTAGGAACAGGAATCAGAATCTGCCCTG  898
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  TGTGCCTCATGGTTTACGAGTCTTA-AAACAGGAATCAGAATCTGCCCTG  895

seq1  ATCCCGAATCCCTCCATA-TTTATTT--ATTTGGTTAAATC  936
      |||||||||||||||||| |||||||   ||||||||||||
seq2  ATCCCGAATCCCTCCATATTTTATTTTATTTTGGTTAAATC  936