BAC Information

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BAC

Clone NameB6Ng01-213B14
Chromosome1 (Build37)
Map Location 148,459,709 - 148,460,825
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213B14.bB6Ng01-213B14.g
ACCGA030725GA030726
length1,1131,200
definitionB6Ng01-213B14.b B6Ng01-213B14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaatttctatctataatatagttacatcagatgaactatggca
taatccaagtttaggattcactcactgccttcttcagaagatgataatac
aacatattttatctttcgtttttttcttttttttaattagttattttctt
catttacatttccaatgctatcccaaaagtcctccacccacccactcccc
tacccacccactcccacttcttggccctagcattcccctgtactgaggca
tataaagtttgcaattcccattgaaggagttacagagacaaagtttggag
ctgagacaaaaggatggaccatcaagagactgccacacccggggatccat
cccataatcagcctccaaaatctaacaccattgcatacactagcaagatt
ttgctgataggaccctgatatagctgtctcttgtgaggctatgccggggc
ctagcaaacacagaagtggatgctcacagtcacctattggatggatcaca
ggacccccaatggaggagccagagaaagtaccaaaggagctaaaggggtc
tgcaaccctatagatggaacaacaatatattttatctttctgaagcatat
cttacttagtttttccaacaatgtgctgagacaaacttagaagttatgac
actttcatctcattatatcatatgttgttacccactcaaataactactat
atttttaagaataaaacatatttacaagccagttgacaggtaagcaaaag
ggcaatcactgaatcaattctagcaagataggaatgatctgtaggtaaca
actaatcccaggcaatcaccatcatactggagaaagtttgtccaaattcc
tttatttaagaactcaaggttcaaactttttctgatatatctaggtctag
tggcaacactggtggttgttattagaaaggatacatttatctttgctgcc
caagaacagcagaaatgattctcttcacttattacatattccaattaaaa
atatatatgtagactcacaaagagaagacttttattaaaataatattcca
cattttactactgccacacttttcatatgagtacaatggcttatagctag
aaaataagtctag

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacatctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaacttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttttgaaag
gacccagatgtagctgtctcttgtgagactatgccggggccctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggcctccc
aatggaggagctagaagaaagagccaagagctaagggatctgcaccctaa
taggtggaacaacatatgagctaaccagtaccccggagcctcttgactct
agctgcaatatatatcaaaagatggcctagtcgcatcactgaaagagagg
cccattgaactgccaaactttatatgccccagttacaggatcagcctaaa
tgggggaatggtgccaagcaagttgtgcgttcggtcatccttactcgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148459709_148460825
seq2: B6Ng01-213B14.b_49_1161 (reverse)

seq1  CTAGACTTA-TTTCTAGCCTATTAAGCCA-TGTACCTCATTATGAAAAGT  48
      ||||||||| ||||||| ||| ||||||| |||| |||| ||||||||||
seq2  CTAGACTTATTTTCTAG-CTA-TAAGCCATTGTA-CTCA-TATGAAAAGT  46

seq1  GTGGCAGTAAGTAAAATGTGGAATATATTTTTAATAAAAGTCTTCTCTTT  98
      |||||||| |||||||||||||||||  ||||||||||||||||||| ||
seq2  GTGGCAGT-AGTAAAATGTGGAATATTATTTTAATAAAAGTCTTCTC-TT  94

seq1  TGTGAGTCTACATATATTATTTTAATTGGAATATGTAATAAGTGAAGAGA  148
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  TGTGAGTCTACATATATATTTTTAATTGGAATATGTAATAAGTGAAGAGA  144

seq1  ATCATTTCTGCTGTTCTTGGGCAGCAAAGAT-AATGTATCCTTTCTAATA  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCATTTCTGCTGTTCTTGGGCAGCAAAGATAAATGTATCCTTTCTAATA  194

seq1  ACAACCACCAGTGTTGGCCACTAGACCTAGATATATCAGAAAAAGTTTGA  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAACCACCAGTGTT-GCCACTAGACCTAGATATATCAGAAAAAGTTTGA  243

seq1  ACCTTGAGTTCTTAAATAAAGGAATTTGGACAAACTTTCTCCAGTATGAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGTTCTTAAATAAAGGAATTTGGACAAACTTTCTCCAGTATGAT  293

seq1  GGTGATTGCCTGGGATTAGTTGTTACCTACAGATCATTCCTATCTTGCTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTGCCTGGGATTAGTTGTTACCTACAGATCATTCCTATCTTGCTA  343

seq1  GAATTGATTCAGTGATTGCCCTTTTGCTTACCTGTCAACTGGCTTGTAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGATTCAGTGATTGCCCTTTTGCTTACCTGTCAACTGGCTTGTAAA  393

seq1  TATGTTTTATTCTTAAAAATATAGTAGTTATTTGAGTGGGTAACAACATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTATTCTTAAAAATATAGTAGTTATTTGAGTGGGTAACAACATA  443

seq1  TGATATAATGAGATGAAAGTGTCATAACTTCTAAGTTTGTCTCAGCACAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAATGAGATGAAAGTGTCATAACTTCTAAGTTTGTCTCAGCACAT  493

seq1  TGTTGGAAAAACTAAGTAAGATATGCTTCAGAAAGATAAAATATATTGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAAAAACTAAGTAAGATATGCTTCAGAAAGATAAAATATATTGTT  543

seq1  GTTCCATCTATAGGGTTGCAGACCCCTTTAGCTCCTTTGGTACTTTCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCTATAGGGTTGCAGACCCCTTTAGCTCCTTTGGTACTTTCTCT  593

seq1  GGCTCCTCCATTGGGGGTCCTGTGATCCATCCAATAGGTGACTGTGAGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTCCATTGGGGGTCCTGTGATCCATCCAATAGGTGACTGTGAGCA  643

seq1  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGCTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGCTA  693

seq1  TATCAGGGTCCTATCAGCAAAATCTTGCTAGTGTATGCAATGGTGTTAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGGTCCTATCAGCAAAATCTTGCTAGTGTATGCAATGGTGTTAGA  743

seq1  TTTTGGAGGCTGATTATGGGATGGATCCCCGGGTGTGGCAGTCTCTTGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAGGCTGATTATGGGATGGATCCCCGGGTGTGGCAGTCTCTTGAT  793

seq1  GGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCAA  843

seq1  TGGGAATTGCAAACTTTATATGCCTCAGTACAGGGGAATGCTAGGGCCAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTGCAAACTTTATATGCCTCAGTACAGGGGAATGCTAGGGCCAA  893

seq1  GAAGTGGGAGTGGGTGGGTAGGGGAGTGGGTGGGTGGAGGACTTTTGGGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGAGTGGGTGGGTAGGGGAGTGGGTGGGTGGAGGACTTTTGGGA  943

seq1  TAGCATTGGAAATGTAAATGAAGAAAATAACTAATTAAAAAAAAGAAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTGGAAATGTAAATGAAGAAAATAACTAATTAAAAAAAAGAAAAA  993

seq1  AACGAAAGATAAAATATGTTGTATTATCATCTTCTGAAGAAGGCAGTGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAAGATAAAATATGTTGTATTATCATCTTCTGAAGAAGGCAGTGAG  1043

seq1  TGAATCCTAAACTTGGATTATGCCATAGTTCATCTGATGTAACTATATTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTAAACTTGGATTATGCCATAGTTCATCTGATGTAACTATATTA  1093

seq1  TAGATAGAAATTGAGAATTC  1117
      ||||||||||||||||||||
seq2  TAGATAGAAATTGAGAATTC  1113


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