BAC Information

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BAC

Clone NameB6Ng01-214B10
Chromosome1 (Build37)
Map Location 14,699,287 - 14,700,428
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039843, EG433273, LOC100039859, LOC100039869, Eya1, LOC665391
Downstream geneMsc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214B10.bB6Ng01-214B10.g
ACCGA031434GA031435
length1,0291,135
definitionB6Ng01-214B10.b B6Ng01-214B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtggcccatttttaatagggttatttggttc
tctggagtctaacttcatccgttctttttatatattggatattagtcctc
tgttggatgtaggattaataacgatttttttccccaatctgttggttgca
tttttgtcttactgacagtgtcctttgccttacagaagctttgtaacttt
atgaagtcccatttgttgattcttgatattacagcacaagccattggtgt
tctgttcagaaaattttcccctgtacacatatgttcgaggttcttcccca
ctttctcctgtaaaagtttcagtgtatgttattttgtgtagaggcttttg
atccacttggacttcaactttgtacagggaattcttctacatgctaaccg
ccagttgatccagcatcaatggttgaaaatgcagtcttttttcccttaga
tcgttttaactcctttgtcaaagatcattgcttcaagtttctttccattt
agtttgatgttggctactggtttgctatatattgctcttactttgtctag
gtatgggccttgaattgctgatctttccaagtcttttatcatgaaggggt
attggattttgtcaaatgctttctcagcatccaatgatatgatcaggatt
ttttttttctttcagcttgtttatatagtggattacattgatggatttct
gtatattgaaccatacctgcatccctgggatgaagcctacttgaatatga
tggatgatcattttgatgtgttattggattcagtttgtgagaattttatt
gagtattttacatagatattcataagagaaattggtctgaacttcccttt
ctttgttaggtctttgtgtggttaaggtatcagagtaattgtggcttcca
tagaattaacttggtagagtaccttctgtttctattttgtggaatagttt
gaggaatattggtattaggcctctttttgaaggtctgatagactctgcac
ttaaaccatctgggtcctaggccttttgt
gaattcttttgcaatctgctcttttttgttttatttggctcgtgggagct
ttcatggtactgaggctccctgcacaccagtgaagggacagccagacgtg
cggctctcttacagcctctttaaacctggagatcttcaagtaggtttcac
atgagggtgcctgtgctttctttaagagcacttctgaattctagggttgt
tcagatttatttttaagctttcctcttccctggaagaaattccccccaga
gaaattctgttctaaactttctctctgactcataagagaacaaatcttac
aaacaggtgaatttttttgaatgccatcctagaaaaaggaaagggtgaga
gcaaaacctgtccaggtgagggggattttatttacagcagtagataaacg
actttaaaagagaaaacagtctcttcccattgaatactaactcaagatag
agaaaaatgtcatccttgctaaactgcttttgttgtggttttggtttggt
ttttttgaggatcttcctaccctttcttccaggagggatgggattaagtt
tctgggatttactattccaagtttgaaaaggagaagaaaatgtttagaac
aacctagtcacaaattcaaaggctttaaagtggcagacattgcaatataa
catactcctttcagttttaagtatcacttaggaaaatgaccacataggat
ttattaactctgaaatgactatctgctccacaggacattccttccacaga
caggctatttaactaaactaactctacagattaacttataaggggataat
ataacaatattgactcaaaaagccattcagaaaagtttgtgaattaatga
actgtaaatatcatagtgtagaggctgacttgcacttgctcaactgctgg
ggctgtgtcagctccataaagcaactcttcagagacagcactcaagtggg
ctctggtgaagtcacaaacttaaataacttggcagttgagacatcccaaa
ccttagagtgttgctgctgcaggttgatatatttctctcaaatgaagccc
atgtctacaaggtaatgacttggataaggaaagaggcactaatgaatcct
ctagagtgggtccttactctctcaggaactgcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14699287_14700428
seq2: B6Ng01-214B10.g_64_1198 (reverse)

seq1  GGGGCAGTTCCTG-GAGAGT-AGGACCCAACTCTTAGAG--ATCATTAGT  46
      ||||||||||||| |||||| ||||||| |||| |||||   ||||||||
seq2  GGGGCAGTTCCTGAGAGAGTAAGGACCC-ACTC-TAGAGGATTCATTAGT  48

seq1  GCCTCTTTCTTTATCCAAGTCATTACTTTGTGGACATGAGCTTTCATTTG  96
      ||||||||| |||||||||||||||| |||| |||||| || ||||||||
seq2  GCCTCTTTCCTTATCCAAGTCATTACCTTGTAGACATGGGC-TTCATTTG  97

seq1  AGAGAAATAATATCAAAACTGCAGCAAGCAAACACTCTAAGGTTTGGGAT  146
      |||||||| ||||| || ||||||| ||| ||||||||||||||||||| 
seq2  AGAGAAAT-ATATC-AACCTGCAGC-AGC-AACACTCTAAGGTTTGGGA-  142

seq1  TGTCTCAACTGCCAAGTTAATTTAAGTTTGTGACTTCACCAGAGCCCACC  196
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  TGTCTCAACTGCCAAGTT-ATTTAAGTTTGTGACTTCACCAGAGCCCAC-  190

seq1  TTTGAGTGCTGTCTCTGAAGAGTTGCTTTATGGAGCTGACACAGCCCCAG  246
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTGAGTGCTGTCTCTGAAGAGTTGCTTTATGGAGCTGACACAGCCCCAG  239

seq1  CAGTTGAGCAAGTGCAAGTCAGCCTCTACACTATGATATTTACAGTTCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGAGCAAGTGCAAGTCAGCCTCTACACTATGATATTTACAGTTCAT  289

seq1  TAATTCACAAACTTTTCTGAATGGCTTTTTGAGTCAATATTGTTATATTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACAAACTTTTCTGAATGGCTTTTTGAGTCAATATTGTTATATTA  339

seq1  TCCCCTTATAAGTTAATCTGTAGAGTTAGTTTAGTTAAATAGCCTGTCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTATAAGTTAATCTGTAGAGTTAGTTTAGTTAAATAGCCTGTCTG  389

seq1  TGGAAGGAATGTCCTGTGGAGCAGATAGTCATTTCAGAGTTAATAAATCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAATGTCCTGTGGAGCAGATAGTCATTTCAGAGTTAATAAATCC  439

seq1  TATGTGGTCATTTTCCTAAGTGATACTTAAAACTGAAAGGAGTATGTTAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTCATTTTCCTAAGTGATACTTAAAACTGAAAGGAGTATGTTAT  489

seq1  ATTGCAATGTCTGCCACTTTAAAGCCTTTGAATTTGTGACTAGGTTGTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATGTCTGCCACTTTAAAGCCTTTGAATTTGTGACTAGGTTGTTC  539

seq1  TAAACATTTTCTTCTCCTTTTCAAACTTGGAATAGTAAATCCCAGAAACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTTTCTTCTCCTTTTCAAACTTGGAATAGTAAATCCCAGAAACT  589

seq1  TAATCCCATCCCTCCTGGAAGAAAGGGTAGGAAGATCCTCAAAAAAACCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCATCCCTCCTGGAAGAAAGGGTAGGAAGATCCTCAAAAAAACCA  639

seq1  AACCAAAACCACAACAAAAGCAGTTTAGCAAGGATGACATTTTTCTCTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAACCACAACAAAAGCAGTTTAGCAAGGATGACATTTTTCTCTAT  689

seq1  CTTGAGTTAGTATTCAATGGGAAGAGACTGTTTTCTCTTTTAAAGTCGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTAGTATTCAATGGGAAGAGACTGTTTTCTCTTTTAAAGTCGTT  739

seq1  TATCTACTGCTGTAAATAAAATCCCCCTCACCTGGACAGGTTTTGCTCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACTGCTGTAAATAAAATCCCCCTCACCTGGACAGGTTTTGCTCTC  789

seq1  ACCCTTTCCTTTTTCTAGGATGGCATTCAAAAAAATTCACCTGTTTGTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCCTTTTTCTAGGATGGCATTCAAAAAAATTCACCTGTTTGTAA  839

seq1  GATTTGTTCTCTTATGAGTCAGAGAGAAAGTTTAGAACAGAATTTCTCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTCTCTTATGAGTCAGAGAGAAAGTTTAGAACAGAATTTCTCTG  889

seq1  GGGGGAATTTCTTCCAGGGAAGAGGAAAGCTTAAAAATAAATCTGAACAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAATTTCTTCCAGGGAAGAGGAAAGCTTAAAAATAAATCTGAACAA  939

seq1  CCCTAGAATTCAGAAGTGCTCTTAAAGAAAGCACAGGCACCCTCATGTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAATTCAGAAGTGCTCTTAAAGAAAGCACAGGCACCCTCATGTGA  989

seq1  AACCTACTTGAAGATCTCCAGGTTTAAAGAGGCTGTAAGAGAGCCGCACG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTTGAAGATCTCCAGGTTTAAAGAGGCTGTAAGAGAGCCGCACG  1039

seq1  TCTGGCTGTCCCTTCACTGGTGTGCAGGGAGCCTCAGTACCATGAAAGCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGTCCCTTCACTGGTGTGCAGGGAGCCTCAGTACCATGAAAGCT  1089

seq1  CCCACGAGCCAAATAAAACAAAAAAGAGCAGATTGCAAAAGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGAGCCAAATAAAACAAAAAAGAGCAGATTGCAAAAGAATTC  1135