BAC Information

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BAC

Clone NameB6Ng01-214G08
Chromosome1 (Build37)
Map Location 180,456,062 - 180,457,117
singlet/doubletsinglet
Overlap genenone
Upstream geneEG631449, LOC100040770, 1700016C15Rik, Adss, EG631584, EG545391, LOC666262, 5830417C01Rik, LOC666284, 4930527J03Rik, LOC666295, B230369F24Rik, LOC669454, 2310005N03Rik, Hnrpu, Efcab2
Downstream geneD230039L06Rik, Kif26b, Smyd3, LOC666354, LOC433941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214G08.bB6Ng01-214G08.g
ACCGA031655GA031656
length1,0591,215
definitionB6Ng01-214G08.b B6Ng01-214G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattctacatccagttaatcgagtccttaaatggagaggcaaggtaga
taagcaaatctgagagtatttgttgcagcaaggagaggctggagagatgg
gtcctcttgcagaggacctgggttcagttcccagcacccacatgacagct
cacaatctgcagctccagatctggtaaccatcttctggcctctgcaggca
cccgctgtgcacatggcactccccccccccccccgtctctctctcacaca
cacacaccctggcaaaaacacttataaaataaacacaaataaatcagaaa
gaaagaaagaaagaaagaaggaaaggaaggaaggaagacaggcagccagg
caggtaggctaaagggagttctccaggctgaaagaaaagaatttagctgg
aattttggttctccaggaggagaaaaatccagacttgcaacaaacaaaca
aacaaacaaacaatccaaaaccaaccaaccaaccaaccaaacaaccaacc
aaccaaacaaacaaaaaacctgggtaaatacatgaacagaaccatatttt
catagttctatgggaagacagattgtttaacacataatttaaacaatcat
attgaggatttttttaatgtgtagatttaaaccattagctcaaaggacag
aggtaaaatagacttgggactgccaaaagtgtacattttaatgaagtctg
ccatgctacttctgaacagcccaggctaagtcaaagattcatatgagagt
cattagagctaggggctcagtcaaaggaccagagaatatgaaaacattat
tcaattaaaaagaaaggcaagtggggggggggcgtgtaagacagcaaaat
aggaaacagacccatgcaaacagtaacaggaaaccccaaaccatgttaag
ccaaacacaaaagatattcggatttctctagaccaaaaataaataaataa
ataaataaaataaaaatcaagatcagtcaaaagtgactggtggtgatgga
aggccggaacagtaactgctaattgttattgtgggggtgggactgctggg
aaagggggg
gaattcaagagaacctactactgccacctcccgagaccaggataatttct
aactgcattctaaagacttatccttattcccaaagatgagtgcggctttt
ctagttctccagtacgagcagcagtgaacaagagaacattacagaaagtc
acagccagtcaaaatagagagaacacctgaccatggggtgcccagcccca
actgacacatctatagcatgagccctacacccgggactcacggaacatgc
agaatgcaggcagaaagactgagagcgagaggaccaagatggacatcggc
tgcaagacgaggtcttttacgtacaacgtggaagcttcacctagggaatc
tccgcagatgttcgccaaaacaaaacgttagcaaggacacagcaactggc
aaggacacagcaactggcaagccagagtggatgggaggattctcacacgc
ctttattcctagaaggaggaaagtaatgatggctgagagaggaagaacca
ggctgtcctggggatgagcaccctggtggatggtcagcagatgctaagag
gccatatctgaacacatatgaacagcactaaatgacttcagcaggctgca
tgtataaatatatacacatacagataaaacaacattaaagaatgggagcc
atgaaattgaacagagttggaaacacaggagtaattggagggagggcagg
agaacaatacagtactcatatgtaaaaatctcacatatttttgtaattaa
agaaaaaaaattcatcttgaagcaaagatttctagagaagatcaactttg
tcctgaaccaaattagatttcaggggcccaacacccgtgtctcggcttct
ctggccctgttcactggcagagctgcaggggcgcagagtgggaagctaat
ttcctggccagatcgcagctcctcatggctgacaggggttcaagtgtttg
cacagacttctggcctcctcatccctctgtcatgggcccatgtacgacag
ttttgtttacaaccaggaaacacgccatctcttcaaggcaccggtgccct
agaaaagcacattacctcatctgacaaacttatgtcaagataagatctgg
agtgctgccaggaagtatggaccctaattgaatatggttcccacgttcaa
atgatatatccttggtgcgtccagagataagagatgtccttataacatca
tgtgcctctctccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_180456062_180457117
seq2: B6Ng01-214G08.b_50_1107

seq1  GAATTCTACATCCAGTTAATCGAGTCCTTAAATGGAGAGGCAAGGTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCCAGTTAATCGAGTCCTTAAATGGAGAGGCAAGGTAGAT  50

seq1  AAGCAAATCTGAGAGTATTTGTTGCAGCAAGGAGAGGCTGGAGAGATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATCTGAGAGTATTTGTTGCAGCAAGGAGAGGCTGGAGAGATGGG  100

seq1  TCCTCTTGCAGAGGACCTGGGTTCAGTTCCCAGCACCCACATGACAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTGCAGAGGACCTGGGTTCAGTTCCCAGCACCCACATGACAGCTC  150

seq1  ACAATCTGCAGCTCCAGATCTGGTAACCATCTTCTGGCCTCTGCAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGCAGCTCCAGATCTGGTAACCATCTTCTGGCCTCTGCAGGCAC  200

seq1  CCGCTGTGCACATGGCACTCCCCCCCCCCCCCCGTCTCTCTCTCACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGTGCACATGGCACTCCCCCCCCCCCCCCGTCTCTCTCTCACACAC  250

seq1  ACACACCCTGGCAAAAACACTTATAAAATAAACACAAATAAATCAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCTGGCAAAAACACTTATAAAATAAACACAAATAAATCAGAAAG  300

seq1  AAAGAAAGAAAGAAAGAAGGAAAGGAAGGAAGGAAGACAGGCAGCCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAGGAAAGGAAGGAAGGAAGACAGGCAGCCAGGC  350

seq1  AGGTAGGCTAAAGGGAGTTCTCCAGGCTGAAAGAAAAGAATTTAGCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGCTAAAGGGAGTTCTCCAGGCTGAAAGAAAAGAATTTAGCTGGA  400

seq1  ATTTTGGTTCTCCAGGAGGAGAAAAATCCAGACTTGCAACAAACAAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTCTCCAGGAGGAGAAAAATCCAGACTTGCAACAAACAAACAA  450

seq1  ACAAACAAACAATCCAAAACCAACCAACCAACCAACCAAACAACCAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAATCCAAAACCAACCAACCAACCAACCAAACAACCAACCA  500

seq1  ACCAAACAAACAAAAAACCTGGGTAAATACATGAACAGAACCATATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACAAACAAAAAACCTGGGTAAATACATGAACAGAACCATATTTTC  550

seq1  ATAGTTCTATGGGAAGACAGATTGTTTAACACATAATTTAAACAATCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTATGGGAAGACAGATTGTTTAACACATAATTTAAACAATCATA  600

seq1  TTGAGGATTTTTTTAATGTGTAGATTTAAACCATTAGCTCAAAGGACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGATTTTTTTAATGTGTAGATTTAAACCATTAGCTCAAAGGACAGA  650

seq1  GGTAAAATAGACTTGGGACTGCCAAAAGTGTACATTTTAATGAAGTCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATAGACTTGGGACTGCCAAAAGTGTACATTTTAATGAAGTCTGC  700

seq1  CATGCTACTTCTGAACAGCCCAGGCTAAGTCAAAGATTCATATGAGAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTACTTCTGAACAGCCCAGGCTAAGTCAAAGATTCATATGAGAGTC  750

seq1  ATTAGAGCTAGGGGCTCAGTCAAAGGACCAGAGAATATGAAAACATTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGCTAGGGGCTCAGTCAAAGGACCAGAGAATATGAAAACATTATT  800

seq1  CAATTAAAAAGAAAGGCAAGT-GGGGGGGGGCGTGTAAGACAGCAAAATA  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAATTAAAAAGAAAGGCAAGTGGGGGGGGGGCGTGTAAGACAGCAAAATA  850

seq1  GGAAACAGACCCATGCAAACAGTAACAGGAAACCCCAAACCATGTTAAGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGACCCATGCAAACAGTAACAGGAAACCCCAAACCATGTTAAGC  900

seq1  CAAACACAAAAGATATTCGGA-TTCTCTAGACCAAAAATAAATAAATAAA  948
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAAACACAAAAGATATTCGGATTTCTCTAGACCAAAAATAAATAAATAAA  950

seq1  TAAATAAAAATAAAAAATCAAGATCAGTCAAAAGTGAACTGTGGTGATGG  998
      |||||||||   |||||||||||||||||||||||||   ||||||||||
seq2  TAAATAAAA--TAAAAATCAAGATCAGTCAAAAGTGACTGGTGGTGATGG  998

seq1  -AGGCCGGAACAGTAACTGCTAATTGTTAATGT-GGGGTGGGACTGCTGG  1046
       |||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  AAGGCCGGAACAGTAACTGCTAATTGTTATTGTGGGGGTGGGACTGCTGG  1048

seq1  GAAGGGGGGG  1056
      ||| ||||||
seq2  GAAAGGGGGG  1058