BAC Information

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BAC

Clone NameB6Ng01-214I18
Chromosome1 (Build37)
Map Location 177,023,829 - 177,185,777
singlet/doubletdoublet
Overlap geneRgs7
Upstream geneOlfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2
Downstream geneFh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214I18.bB6Ng01-214I18.g
ACCGA031767GA031768
length983935
definitionB6Ng01-214I18.b B6Ng01-214I18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(177,184,788 - 177,185,777)(177,023,829 - 177,024,761)
sequence
gaattctcctcttctgaaggagagtgagaaggttttctttaatatttgat
tcctttccaccttctcttgaagacagccttcaaatggacaaacctcactg
aagtcattctgccctgaaagcaattaagatcaaataccacaaggctaaaa
ataccgatgttacactttcagcagcaattcttggctgttttgctccactt
tatggtcaggtggtcttttagcaagagatggatgctaacggttgccaggg
actggtgtggtggggagaacagtaaataattcaaaaatagctgctctcaa
gtgctaagcaatttggcttgtctcagaacttaaagaatttttattttgtc
tgaagctgacgataaaggctgtattatcttaaatggattttatctgtggg
gtttgctggattacaagccctcctacttacatgacatggttttgggggag
tttctttggtaataatctcactccagcttcattctgtgcatttctgtgag
atacactagtcctctggatgaaggatggggagagagagagagaccatgct
tagtacatcaggtcctcgtgcctcttattttatctatatgatgaacagaa
ggatttttctttgtggtttggtcatctggtgtgtgtaaacacgaagatga
aatctgtctgaaagcaaagctgatgcagaagagtacagagtgcagagccg
tggaagagagtgaaactctgccctagctttaagcaccatctgtgccaaag
tttttggcaacaagacaaaagaattcccacccttttccctcacagcctag
cttgggcctctgaaagctaagttttgagctacttaacctttttatgcagc
cttttcttcctcagttcccagtgataaagttatttgcaactaacaacaac
tgtgggttttttgtgtgtgtgttttttaaatgatttgaacaatttaaagt
ttatatcctgtgttattctctcatagtaagaaa
gaattctcaggacaaaaccccagagtggagtatatttgcaacagccagag
atggatatcttgaaagtagacacttcagcgagaccaagggacacatatcc
atttacctttcgtgttttgtgtgggtttctcatccgggatgacttcttaa
tgtccacttctgtagtatttacacatccaggctggggaagaaaaagagta
aagaaatcttagctatgccagatctagcaggattgttactaatgaattgc
ttcacagagcaaaccagcggcttccaagatggcctggcccattccagaac
tgaccagtaataaagtccactgcagctttctccttccgatataatagtgc
taagaacctcaaacagtttccagaggcatcatggaaaaaggactcaggct
tggtatgggaagcatgtctctgcaatgcctcgaatggaatagtcccaaaa
aggattctgggaagaatggtgtgatactgctggccacacagagcttgcca
cagggcacacataccttatgtatgctgtttttatgtggtactcacttttt
cccaatgtgcacaactaccatggtgttcagttgagacagcacaaatccca
aactgaatcatttttacagtgattaagaaatctgttacctgggaatattt
gctttcctcagatagaaggcacattgaaatcatggtccccatagagaggg
taaggatggaaacaggaacccatatattatacttttcctacaggtttctg
actttctttttcctttccctcaggtatgtaaattccttcaaaataggagg
ttgaaagaagtgtgtgccgtctgctgctggcttcttgacagcccgggagt
tttattttgccagaattactgtccagttgctcagaaacaaatagatgtga
acttttgtatttggaggatgaagaggggaaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_177184788_177185777
seq2: B6Ng01-214I18.b_48_1030 (reverse)

seq1  TTTCTTACTATGAGAGAAAAAACACCAGGATATAAAACTTTAAAATTGTT  50
      |||||||||||||||| || |||| |||||||| ||||||| |||||| |
seq2  TTTCTTACTATGAGAG-AATAACA-CAGGATAT-AAACTTT-AAATTG-T  45

seq1  TCAAATCATTTAAAAAAACACACACAACAAAAAACCCACAGTTGTTGTTA  100
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  TCAAATCATTT-AAAAAACACACAC-ACAAAAAACCCACAGTTGTTGTTA  93

seq1  GTTGCAAATAACTTTTATCACTGGGAACTGAGGAAG-AAAGGCTGCATAA  149
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  GTTGCAAATAAC-TTTATCACTGGGAACTGAGGAAGAAAAGGCTGCATAA  142

seq1  AAAGGTTAAGTAGCTCAAAACTTAGCTTTCAGGGGCCCAAGCTAGGCTGT  199
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGGTTAAGTAGCTCAAAACTTAGCTTTCAGAGGCCCAAGCTAGGCTGT  192

seq1  GAGGGAAAAGGGTGGGAATTCTTTTGTCTTGTTGCCAAAAACTTTGGCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAAGGGTGGGAATTCTTTTGTCTTGTTGCCAAAAACTTTGGCAC  242

seq1  AGATGGTGCTTAAAGCTAGGGCAGAGTTTCACTCTCTTCCACGGCTCTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTGCTTAAAGCTAGGGCAGAGTTTCACTCTCTTCCACGGCTCTGC  292

seq1  ACTCTGTACTCTTCTGCATCAGCTTTGCTTTCAGACAGATTTCATCTTCG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTACTCTTCTGCATCAGCTTTGCTTTCAGACAGATTTCATCTTCG  342

seq1  TGTTTACACACACCAGATGACCAAACCACAAAGAAAAATCCTTCTGTTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACACACACCAGATGACCAAACCACAAAGAAAAATCCTTCTGTTCA  392

seq1  TCATATAGATAAAATAAGAGGCACGAGGACCTGATGTACTAAGCATGGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGATAAAATAAGAGGCACGAGGACCTGATGTACTAAGCATGGTC  442

seq1  TCTCTCTCTCTCCCCATCCTTCATCCAGAGGACTAGTGTATCTCACAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCCCCATCCTTCATCCAGAGGACTAGTGTATCTCACAGAA  492

seq1  ATGCACAGAATGAAGCTGGAGTGAGATTATTACCAAAGAAACTCCCCCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGAATGAAGCTGGAGTGAGATTATTACCAAAGAAACTCCCCCAA  542

seq1  AACCATGTCATGTAAGTAGGAGGGCTTGTAATCCAGCAAACCCCACAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGTCATGTAAGTAGGAGGGCTTGTAATCCAGCAAACCCCACAGAT  592

seq1  AAAATCCATTTAAGATAATACAGCCTTTATCGTCAGCTTCAGACAAAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATTTAAGATAATACAGCCTTTATCGTCAGCTTCAGACAAAATA  642

seq1  AAAATTCTTTAAGTTCTGAGACAAGCCAAATTGCTTAGCACTTGAGAGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTTTAAGTTCTGAGACAAGCCAAATTGCTTAGCACTTGAGAGCA  692

seq1  GCTATTTTTGAATTATTTACTGTTCTCCCCACCACACCAGTCCCTGGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTTGAATTATTTACTGTTCTCCCCACCACACCAGTCCCTGGCAA  742

seq1  CCGTTAGCATCCATCTCTTGCTAAAAGACCACCTGACCATAAAGTGGAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTAGCATCCATCTCTTGCTAAAAGACCACCTGACCATAAAGTGGAGC  792

seq1  AAAACAGCCAAGAATTGCTGCTGAAAGTGTAACATCGGTATTTTTAGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCCAAGAATTGCTGCTGAAAGTGTAACATCGGTATTTTTAGCCT  842

seq1  TGTGGTATTTGATCTTAATTGCTTTCAGGGCAGAATGACTTCAGTGAGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATTTGATCTTAATTGCTTTCAGGGCAGAATGACTTCAGTGAGGT  892

seq1  TTGTCCATTTGAAGGCTGTCTTCAAGAGAAGGTGGAAAGGAATCAAATAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATTTGAAGGCTGTCTTCAAGAGAAGGTGGAAAGGAATCAAATAT  942

seq1  TAAAGAAAACCTTCTCACTCTCCTTCAGAAGAGGAGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAACCTTCTCACTCTCCTTCAGAAGAGGAGAATTC  983

seq1: chr1_177023829_177024761
seq2: B6Ng01-214I18.g_65_999

seq1  GAATTCTCAGGACAAAACCCCAGAGTGGAGTATATTTGCAACAGCCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGACAAAACCCCAGAGTGGAGTATATTTGCAACAGCCAGAG  50

seq1  ATGGATATCTTGAAAGTAGACACTTCAGCGAGACCAAGGGACACATATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATCTTGAAAGTAGACACTTCAGCGAGACCAAGGGACACATATCC  100

seq1  ATTTACCTTTCGTGTTTTGTGTGGGTTTCTCATCCGGGATGACTTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTTTCGTGTTTTGTGTGGGTTTCTCATCCGGGATGACTTCTTAA  150

seq1  TGTCCACTTCTGTAGTATTTACACATCCAGGCTGGGGAAGAAAAAGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACTTCTGTAGTATTTACACATCCAGGCTGGGGAAGAAAAAGAGTA  200

seq1  AAGAAATCTTAGCTATGCCAGATCTAGCAGGATTGTTACTAATGAATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCTTAGCTATGCCAGATCTAGCAGGATTGTTACTAATGAATTGC  250

seq1  TTCACAGAGCAAACCAGCGGCTTCCAAGATGGCCTGGCCCATTCCAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGAGCAAACCAGCGGCTTCCAAGATGGCCTGGCCCATTCCAGAAC  300

seq1  TGACCAGTAATAAAGTCCACTGCAGCTTTCTCCTTCCGATATAATAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGTAATAAAGTCCACTGCAGCTTTCTCCTTCCGATATAATAGTGC  350

seq1  TAAGAACCTCAAACAGTTTCCAGAGGCATCATGGAAAAAGGACTCAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACCTCAAACAGTTTCCAGAGGCATCATGGAAAAAGGACTCAGGCT  400

seq1  TGGTATGGGAAGCATGTCTCTGCAATGCCTCGAATGGAATAGTCCCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGGAAGCATGTCTCTGCAATGCCTCGAATGGAATAGTCCCAAAA  450

seq1  AGGATTCTGGGAAGAATGGTGTGATACTGCTGGCCACACAGAGCTTGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTGGGAAGAATGGTGTGATACTGCTGGCCACACAGAGCTTGCCA  500

seq1  CAGGGCACACATACCTTATGTATGCTGTTTTTATGTGGTACTCACTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCACACATACCTTATGTATGCTGTTTTTATGTGGTACTCACTTTTT  550

seq1  CCCAATGTGCACAACTACCATGGTGTTCAGTTGAGACAGCACAAATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGTGCACAACTACCATGGTGTTCAGTTGAGACAGCACAAATCCCA  600

seq1  AACTGAATCATTTTTACAGTGATTAAGAAATCTGTTACCTGGGAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCATTTTTACAGTGATTAAGAAATCTGTTACCTGGGAATATTT  650

seq1  GCTTTCCTCAGATAGAAGGCACATTGAAATCATGGTCCCCATAGAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTCAGATAGAAGGCACATTGAAATCATGGTCCCCATAGAGAGGG  700

seq1  TAAGGATGGAAACAGGAACCCATATATTATACTTTTCCTACAGGTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATGGAAACAGGAACCCATATATTATACTTTTCCTACAGGTTTCTG  750

seq1  ACTTTCTTTTTCCTTTCCCTCAGGTATGTAAATTCCTTCAAAATAGGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTTTCCTTTCCCTCAGGTATGTAAATTCCTTCAAAATAGGAGG  800

seq1  TTGAAAGAAGTGTGTGCCGTCTGCTGCTGGCTTCCTGACAGCCCGGGAGT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGAAAGAAGTGTGTGCCGTCTGCTGCTGGCTTCTTGACAGCCCGGGAGT  850

seq1  TTTATTTTGCCAGAATTACTGTCCAGTTGCTCAGAAACAAATAGATGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGCCAGAATTACTGTCCAGTTGCTCAGAAACAAATAGATGTGA  900

seq1  ACTTTTGTATTTGGAGGATG-AGAGGGG-AGGTGG  933
      |||||||||||||||||||| ||||||| ||||||
seq2  ACTTTTGTATTTGGAGGATGAAGAGGGGAAGGTGG  935