BAC Information

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BAC

Clone NameB6Ng01-214M08
Chromosome1 (Build37)
Map Location 28,843,427 - 29,008,277
singlet/doubletdoublet
Overlap geneLOC435614, EG623924
Upstream geneEG433281, EG665903, Gm597
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214M08.bB6Ng01-214M08.g
ACCGA031929GA031930
length3891,032
definitionB6Ng01-214M08.b B6Ng01-214M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,007,883 - 29,008,277)(28,843,427 - 28,844,471)
sequence
ctagtctctcttggaatgactttattattgtggtaaaagtatattaaaaa
ttaattatgacttaactacaacattagaatagattgtattttcttgtgat
ggatattcttacagaaaaacttggacacatctgcctgaccaggaaccata
taaagacacaagaagacaaaaataatccatatgctatacagagacctcaa
aacctttctgacattctttctttttatttttctttcttttatatttgttg
ttgttgttgggttttgtttgtttgtttgtttgtttgtttgtttgtttttt
caagacagggtttctctatatagccctggttgtcctggaactcactttgt
agacccggctggcctcaaactcagaaatcagcctgcctc

gaattcaatgttcacttagttgtcttgtatatagccctgaaagagtcatg
cagggtatgcatccagaagttatgtacatgcctctactttataaatttat
tttcctgagaaggtgctggatgttttcttctactatgttgataaacactt
aaaattatcttcctgtgatgcaggtgatagcatagagtcaatatgctatg
taggagaacacagtaaagttcaatgctggggaaaaatatgttctagggag
atagatatccaaatattaaggtataaatcatattaatctaagagaaaaat
gaggagaaatgagaacagtggggaaaaagactatacttctagcatccttg
ttaatgtcttcctttgtttctgtgcagtttgttgatctacaccatgtaat
tgattttagaatccagtaatatttcctccttgctttaaacaagaaaccac
ggaatagaactttctccaatttgagactgtcagcctgacttttcttcaaa
tatcttcccaactttaggttgttgcaaggctacaggcaaccttttttctt
ttttcttttcaattttttaaattaggtatttatttcatttccatttccag
tggtatcccaaatgtcccccacaagctccccaacccactctcccacccac
ccactcccacttcttggccctggtgttctcttgtactgaggcatataaag
tttgcacgaacaatgggcctctctttccactgatggccgactaggccatc
ttctgatacatatgcagctagagtcacaagctccgggggtactggttagt
tcatattgttgttccacctatagggttgcagattttatttgtttacattt
tgaatgatatcctcctcccggttaccccacacacatacaactccccatcc
atctctctctcccccatcccctttgcctctagagggtgctccttcactca
ctcaccaactcccacctactctctagcatcactatgctggggcatcaacc
tcacagaccaagctccccttccatgatatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29007883_29008277
seq2: B6Ng01-214M08.b_44_438 (reverse)

seq1  GAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCCGGGTCTACAAAGTGAGT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGCTGATTTCTGAGTTTGAGGCCAGCCGGGTCTACAAAGTGAGT  50

seq1  TCCAGGACAACCAGGGCTATATAGAGAAACCCTGTCTTGAAAAAACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAACCAGGGCTATATAGAGAAACCCTGTCTTGAAAAAACAAAC  100

seq1  AAACAAACAAACAAACAAACAAACAAAACCCAACAACAACAACAAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAACAAACAAAACCCAACAACAACAACAAATATA  150

seq1  AAAGAAAGAAAAATAAAAAGAAAGAATGTCAGAAAGGTTTTGAGGTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAAATAAAAAGAAAGAATGTCAGAAAGGTTTTGAGGTCTCT  200

seq1  GTATAGCATATGGATTATTTTTGTCTTCTTGTGTCTTTATATGGTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCATATGGATTATTTTTGTCTTCTTGTGTCTTTATATGGTTCCTG  250

seq1  GTCAGGCAGATGTGTCCAAGTTTTTCTGTAAGAATATCCATCACAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCAGATGTGTCCAAGTTTTTCTGTAAGAATATCCATCACAAGAAA  300

seq1  ATACAATCTATTCTAATGTTGTAGTTAAGTCATAATTAATTTTTAATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATCTATTCTAATGTTGTAGTTAAGTCATAATTAATTTTTAATATA  350

seq1  CTTTTACCACAATAATAAAGTCATTCCAAGAGAGACTAGGAATTC  395
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCACAATAATAAAGTCATTCCAAGAGAGACTAGGAATTC  395


seq1: chr1_28843427_28844471
seq2: B6Ng01-214M08.g_66_1097

seq1  GAATTCAATGTTCACTTAGTTGTCTTGTATATAGCCCTGAAAGAGTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTCACTTAGTTGTCTTGTATATAGCCCTGAAAGAGTCATG  50

seq1  CAGGGTATGCATCCAGAAGTTATGTACATGCCTCTACTTTATAAATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTATGCATCCAGAAGTTATGTACATGCCTCTACTTTATAAATTTAT  100

seq1  TTTCCTGAGAAGGTGCTGGATGTTTTCTTCTACTATGTTGATAAACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAGAAGGTGCTGGATGTTTTCTTCTACTATGTTGATAAACACTT  150

seq1  AAAATTATCTTCCTGTGATGCAGGTGATAGCATAGAGTCAATATGCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCTTCCTGTGATGCAGGTGATAGCATAGAGTCAATATGCTATG  200

seq1  TAGGAGAACACAGTAAAGTTCAATGCTGGGGAAAAATATGTTCTAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAACACAGTAAAGTTCAATGCTGGGGAAAAATATGTTCTAGGGAG  250

seq1  ATAGATATCCAAATATTAAGGTATAAATCATATTAATCTAAGAGAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATCCAAATATTAAGGTATAAATCATATTAATCTAAGAGAAAAAT  300

seq1  GAGGAGAAATGAGAACAGTGGGGAAAAAGACTATACTTCTAGCATCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGAAATGAGAACAGTGGGGAAAAAGACTATACTTCTAGCATCCTTG  350

seq1  TTAATGTCTTCCTTTGTTTCTGTGCAGTTTGTTGATCTACACCATGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTCTTCCTTTGTTTCTGTGCAGTTTGTTGATCTACACCATGTAAT  400

seq1  TGATTTTAGAATCCAGTAATATTTCCTCCTTGCTTTAAACAAGAAACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAGAATCCAGTAATATTTCCTCCTTGCTTTAAACAAGAAACCAC  450

seq1  GGAATAGAACTTTCTCCAATTTGAGACTGTCAGCCTGACTTTTCTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGAACTTTCTCCAATTTGAGACTGTCAGCCTGACTTTTCTTCAAA  500

seq1  TATCTTCCCAACTTTAGGTTGTTGCAAGGCTACAGGCAACCTTTTTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCCAACTTTAGGTTGTTGCAAGGCTACAGGCAACCTTTTTTCTT  550

seq1  TTTTCTTTTCAATTTTTTAAATTAGGTATTTATTTCATTTCCATTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTCAATTTTTTAAATTAGGTATTTATTTCATTTCCATTTCCAG  600

seq1  TGGTATCCCAAATGTCCCCCACAAGCTCCCCAACCCACTCTCCCACCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCCCAAATGTCCCCCACAAGCTCCCCAACCCACTCTCCCACCCAC  650

seq1  CCACTCCCACTTCTTGGCCCTGGTGTTCTCTTGTACTGAGGCATATAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCACTTCTTGGCCCTGGTGTTCTCTTGTACTGAGGCATATAAAG  700

seq1  TTTGCACGAACAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACGAACAATGGGCCTCTCTTTCCACTGATGGCCGACTAGGCCATC  750

seq1  TTCTGATACATATGCAGCTAGAGTCACAAGCTCCGGGGGTACTGGTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATACATATGCAGCTAGAGTCACAAGCTCCGGGGGTACTGGTTAGT  800

seq1  TCATATTGTTGTTCCACCTATAGGGTTGCAGATTTTATTTGTTTACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTGTTGTTCCACCTATAGGGTTGCAGATTTTATTTGTTTACATTT  850

seq1  TGAATGATATCCTCCTCCCGGTTACCCCACACACATACAACTCCCCATCC  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGAATGATATCCTCCTCCCGGTTACCCCACACACATACAACTCCCCAT-C  899

seq1  CATCTCTCTCTCCCCCATCCCCTTTGCCTCTAAGAGGGTGCTCCTTCACT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CATCTCTCTCTCCCCCATCCCCTTTGCCTCT-AGAGGGTGCTCCTTCACT  948

seq1  CACTCACCAACTCCCACCTTACCTCTCTAGCATCCACCTATGCTGGGGCA  1000
      |||||||||||||||||||   ||||||||||||   |||||||||||||
seq2  CACTCACCAACTCCCACCT--ACTCTCTAGCATC--ACTATGCTGGGGCA  994

seq1  TCAAACCTCCACAGGACCAAAGGCTTCCCCTCCCATTGATATCAG  1045
      || ||||| |||| ||||||  || |||||| ||| |||||||||
seq2  TC-AACCT-CACA-GACCAA--GC-TCCCCTTCCA-TGATATCAG  1032


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