BAC Information

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BAC

Clone NameB6Ng01-214P15
Chromosome1 (Build37)
Map Location 50,417,049 - 50,418,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627430, LOC100041981, EG666962, EG666970
Downstream geneLOC100041993, Tmeff2, Sdpr, LOC383504
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214P15.bB6Ng01-214P15.g
ACCGA032079GA032080
length1,147840
definitionB6Ng01-214P15.b B6Ng01-214P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggtgtcccagagtctctttgtgttttcctattgtagacataac
agcaagtctttctatagtgtgccttggtttcttttattgaatcatgacat
tcaaaaatcaagttgcaggactgtatgtaggtgtattcatttttattcca
tatcaatggtaacgaagtgtggtttactctcatgcatgaaaaacagggat
accacagtgtgggtagtggagatagtatgaacttattttctcatagtttt
gaagaaagaacctatggccaacataccatgatcatcctgtaaatatccct
agctattgcacccttaattgttgattgtctctcctcacctgttacatctg
ttactcctttctatgtaaccaaatttcttctaaaaaggcttcctatcaat
ataaatcagattctattttgaaaattcttcgaagtaagcaagatttttgt
ctttagcatatattttctttaaattgcgaagcataattcattgaataaac
tctatataccagtcaataactttttctgcttatcaatgctgtgtagtaca
gtctaatcatctacacttctgcctgattcttcctttgtctttatgccaac
ttacatgtctgaactatgatctgtggtataaaatgtctgaaactggaatc
agtgttggaaagtgccctacatttagtaagtatgttaattaaaaacttat
tggctgtgaccactgttattttgtgaggcaggatattttcattcttattt
taatagttaatagtttgtataaaaatgtcctgtagctatattatttaata
tagacttgttcgtatttaaaattgcacatttgaaaaatgtaagcttacaa
cgtgggcaagggttactagtggagtgcttgcctagcatatgtgaaatgct
gtgttcaacaagaatacttcaaaaaaagcttcattctgtgtatagagaga
atcttagtcactactatttccatttactgaaacacaattgattgaaatga
cttattatttatttattatttattatttattatttatagtttccagacgg
gttctcttatagcctggctgttcaggacctccactttgtgaacagcttgt
cctcgatctgaagaatccacttgcgtctccctcctgagttgctgggg

gaattctctgtttaattctataccccaaattctgattgggttgtttggtt
ttcttgggtgggggggaaaaaggactaaagccctgagagtcagcagaatg
aatggaattaggcaacctcaggaagtaggaggtggagggaccctccagaa
tgtatcagagatctgggaggtaagagactttcagtactcaaagggaggaa
ccttagatgaaatgtcctatagtagggagaaggaacttgtagagccacct
ccagcagaaagatagtctatcaagtgaggaatggggttgctgttccagtc
aaaactttgacccataattcttcctgtctgaaagaaataaagggatataa
atggagaggatcctgaggaaaaggaggtccagaaccaggtccaaagtggc
atccagttcaagttgaggccccaagactcaacactcttactgaggccatg
aagcactgacaaaaagggacctattatcactgccctccaaaagatccaac
aagcagctgaaagagtcagatgcagatatttgtacccaaccaagggtcag
aagctgctgacctatgtggttgaattagggaaggctgaaagaagctaagg
aaaagagcaaccctgtaggagtactaacagtatcaattaacctgaccccc
accccgagatctctcaaacactggaccaccaacccaagcagcatacacca
gctgatatgaggcccacaaacacatatacatcagagaactgctggggtct
ggattcagtcagagaagatgcacccttaagactgggaggtcccaaggagt
ttagatgttctggggggagttgagtgaagtggggagagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50417049_50418206
seq2: B6Ng01-214P15.b_48_1193 (reverse)

seq1  CCCAGC-ACTCAGGAGGCAGACGCAGGTGGATTTCTCAGTTCGAGGCCAG  49
      |||||| |||||||||| ||||||| |||||||  |||| |||||| || 
seq2  CCCAGCAACTCAGGAGGGAGACGCAAGTGGATTCTTCAGATCGAGGACAA  50

seq1  CCTGGTCTACAAAGT-GAGTTCCTGGACAGCCAGGGCTATAAAGAGAAAC  98
       ||| || ||||||| ||| ||||| ||||||| |||||| |||||||  
seq2  GCTGTTC-ACAAAGTGGAGGTCCTGAACAGCCA-GGCTAT-AAGAGAA--  95

seq1  CCTGTCTCGAAAAACTAATAAATAAATAAATAAATAAATAAATAAATAAA  148
      || |||| |  ||||| |||||| ||||||| ||||||| ||||||||||
seq2  CCCGTCTGG--AAACT-ATAAAT-AATAAAT-AATAAAT-AATAAATAAA  139

seq1  TAAATAAGTCATTTCAATCAATTGTTGTTTCAGTAAATGGAAATAGTAGT  198
      | |||||||||||||||||||||| |||||||||||||||||||||||||
seq2  T-AATAAGTCATTTCAATCAATTG-TGTTTCAGTAAATGGAAATAGTAGT  187

seq1  GACTAAGATTCTCTCTATACACAGAATGAAGCTTTTTTTGAAGTATTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACTAAGATTCTCTCTATACACAGAATGAAGCTTTTTTTGAAGTA-TTCT  236

seq1  TGTTGAACACAGCATTTCACATATGCTAGGCAAGCACTCCACTAGTAACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAACACAGCATTTCACATATGCTAGGCAAGCACTCCACTAGTAACC  286

seq1  CTTGCCCACGTTGTAAGCTTACATTTTTCAAATGTGCAATTTTAAATACG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCACGTTGTAAGCTTACATTTTTCAAATGTGCAATTTTAAATACG  336

seq1  AACAAGTCTATATTAAATAATATAGCTACAGGACATTTTTATACAAACTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTCTATATTAAATAATATAGCTACAGGACATTTTTATACAAACTA  386

seq1  TTAACTATTAAAATAAGAATGAAAATATCCTGCCTCACAAAATAACAGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATTAAAATAAGAATGAAAATATCCTGCCTCACAAAATAACAGTG  436

seq1  GTCACAGCCAATAAGTTTTTAATTAACATACTTACTAAATGTAGGGCACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCCAATAAGTTTTTAATTAACATACTTACTAAATGTAGGGCACT  486

seq1  TTCCAACACTGATTCCAGTTTCAGACATTTTATACCACAGATCATAGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACACTGATTCCAGTTTCAGACATTTTATACCACAGATCATAGTTC  536

seq1  AGACATGTAAGTTGGCATAAAGACAAAGGAAGAATCAGGCAGAAGTGTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTAAGTTGGCATAAAGACAAAGGAAGAATCAGGCAGAAGTGTAG  586

seq1  ATGATTAGACTGTACTACACAGCATTGATAAGCAGAAAAAGTTATTGACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAGACTGTACTACACAGCATTGATAAGCAGAAAAAGTTATTGACT  636

seq1  GGTATATAGAGTTTATTCAATGAATTATGCTTCGCAATTTAAAGAAAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATAGAGTTTATTCAATGAATTATGCTTCGCAATTTAAAGAAAATA  686

seq1  TATGCTAAAGACAAAAATCTTGCTTACTTCGAAGAATTTTCAAAATAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAAAGACAAAAATCTTGCTTACTTCGAAGAATTTTCAAAATAGAA  736

seq1  TCTGATTTATATTGATAGGAAGCCTTTTTAGAAGAAATTTGGTTACATAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTATATTGATAGGAAGCCTTTTTAGAAGAAATTTGGTTACATAG  786

seq1  AAAGGAGTAACAGATGTAACAGGTGAGGAGAGACAATCAACAATTAAGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGTAACAGATGTAACAGGTGAGGAGAGACAATCAACAATTAAGGG  836

seq1  TGCAATAGCTAGGGATATTTACAGGATGATCATGGTATGTTGGCCATAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGCTAGGGATATTTACAGGATGATCATGGTATGTTGGCCATAGG  886

seq1  TTCTTTCTTCAAAACTATGAGAAAATAAGTTCATACTATCTCCACTACCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCAAAACTATGAGAAAATAAGTTCATACTATCTCCACTACCC  936

seq1  ACACTGTGGTATCCCTGTTTTTCATGCATGAGAGTAAACCACACTTCGTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGGTATCCCTGTTTTTCATGCATGAGAGTAAACCACACTTCGTT  986

seq1  ACCATTGATATGGAATAAAAATGAATACACCTACATACAGTCCTGCAACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATATGGAATAAAAATGAATACACCTACATACAGTCCTGCAACT  1036

seq1  TGATTTTTGAATGTCATGATTCAATAAAAGAAACCAAGGCACACTATAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTGAATGTCATGATTCAATAAAAGAAACCAAGGCACACTATAGA  1086

seq1  AAGACTTGCTGTTATGTCTACAATAGGAAAACACAAAGAGACTCTGGGAC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGCTGTTATGTCTACAATAGGAAAACACAAAGAGACTCTGGGAC  1136

seq1  ACCTGAATTC  1158
      ||||||||||
seq2  ACCTGAATTC  1146


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