BAC Information

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BAC

Clone NameB6Ng01-215B03
Chromosome1 (Build37)
Map Location 84,877,954 - 84,878,450
singlet/doubletsinglet
Overlap geneFbxo36
Upstream gene5033414K04Rik, LOC100039638, Dner, Trip12
Downstream geneSlc16a14, LOC100039695, EG665317, LOC100039723, A530032D15Rik, LOC100039742, LOC100040158, LOC621835, EG665378, C130026I21Rik, LOC100040135, LOC639868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215B03.bB6Ng01-215B03.g
ACCGA032146GA032147
length4911,184
definitionB6Ng01-215B03.b B6Ng01-215B03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cattcccagcacccatgggaggaggggcttacaactgcctgtaactccag
ctccacggaatccagtgccctctcctggcctctgtgggcaattgcacaac
cctcgtatacataattaaaaacaagatacagcttttaaaattaaaacttt
tctgggatagagtctcttgcattctaatgtcatcgttgtcgtcgtctttc
tggggaggcgtgaataaatgactgtttaccccagagaggagaacaatcac
agacggaagaaagatgtgattccacccacgtactgtgagtgtcctggggt
taggcacaggcatgtggatgactcagatttagctgtgtcactgaaaggcc
cagccttgagtgtctgatgactcacaaagcctgtatccccatacaacttg
caggcggctccaatagtctctgtctctgttgctcatctccatcctcagag
aggagtgggaaggagagagagagagagagagagagagagag
gaattcatttgccatgttttgttttattttgttttttaagaatttgctgt
tcttctattagaatcaagttgctacagtcataaaatgctgactcatggga
taatcaaaaaagaacctcaagaaaatgactgaattgatatgcaaatgaaa
gactgggctttgatctgcaagagctaagcaacctggatgagctgtctgga
gagaaaacagagttcttttagaatttttttctagcagctacccagagaga
actgcttggagagcaaatacaggtcttttacaatctttttcctgcaagag
agcaaaagagagctgtctcaggcagaggaaactgtctgaagcagaaagct
gtcttgagcagaaagctatcttgagcatactacagatccaagagctatct
acagagagctgtctagggagccatcttgagcagattacaaggctaatcag
cttgtacccatgatttgacttttagtcatttttttggttggtggtgaaca
ctctccttcctcagaaccctctccaagctgaggttgatccttagcagaac
tcaagaagttagataccaataatccaaataacccaattaaaaaatgaggt
acagagctaaatagagaattttcaacaaaggaatcttgaatggctgaaaa
acacctaaagaaatgttcaacatccttagtcatcagggaaatgcaaatca
aaacaactctgagattccaccttacacctatcagaatggctaagatcaaa
aactcaaagaacaacacatgctgacaaggttgtggagcaagagaaatact
cctacactgctgggggaggacaaacttgtacaaccactctggaagtcaac
ttggcagttgctcagaaaattgggaatagttctacctcaagacccagcta
taccacacctgagcatgtacccagaagatgtgccaccatcccacaggaca
tttgctcactatgctcagcagttttattcataataaaacagaaactggga
aacaacccagattccctcactaagatgagacagaaatgtgctcatttacc
cgtggactactactcaccataaaacaggaatattcagaatttctcacggc
atgaaggaacctttaaaaattcatctagtaggttactgaccctaatgtac
ggccataaatggtactcacgtttattagtggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_84877954_84878450
seq2: B6Ng01-215B03.b_46_542

seq1  GAATTCCATTCCCAGCACCCATGGGAGGAGGGGCTTACAACTGCCTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCCCAGCACCCATGGGAGGAGGGGCTTACAACTGCCTGTAA  50

seq1  CTCCAGCTCCACGGAATCCAGTGCCCTCTCCTGGCCTCTGTGGGCAATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTCCACGGAATCCAGTGCCCTCTCCTGGCCTCTGTGGGCAATTG  100

seq1  CACAACCCTCGTATACATAATTAAAAACAAGATACAGCTTTTAAAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCCTCGTATACATAATTAAAAACAAGATACAGCTTTTAAAATTAA  150

seq1  AACTTTTCTGGGATAGAGTCTCTTGCATTCTAATGTCATCGTTGTCGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTGGGATAGAGTCTCTTGCATTCTAATGTCATCGTTGTCGTCG  200

seq1  TCTTTCTGGGGAGGCGTGAATAAATGACTGTTTACCCCAGAGAGGAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGGGAGGCGTGAATAAATGACTGTTTACCCCAGAGAGGAGAAC  250

seq1  AATCACAGACGGAAGAAAGATGTGATTCCACCCACGTACTGTGAGTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGACGGAAGAAAGATGTGATTCCACCCACGTACTGTGAGTGTCC  300

seq1  TGGGGTTAGGCACAGGCATGTGGATGACTCAGATTTAGCTGTGTCACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTAGGCACAGGCATGTGGATGACTCAGATTTAGCTGTGTCACTGA  350

seq1  AAGGCCCAGCCTTGAGTGTCTGATGACTCACAAAGCCTGTATCCCCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCAGCCTTGAGTGTCTGATGACTCACAAAGCCTGTATCCCCATAC  400

seq1  AACTTGCAGGCGGCTCCAATAGTCTCTGTCTCTGTTGCTCATCTCCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCAGGCGGCTCCAATAGTCTCTGTCTCTGTTGCTCATCTCCATCC  450

seq1  TCAGAGAGGAGTGGGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAGGAGTGGGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  497