BAC Information

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BAC

Clone NameB6Ng01-215E06
Chromosome1 (Build37)
Map Location 74,506,055 - 74,727,406
singlet/doubletdoublet
Overlap geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4
Upstream geneLOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra, Arpc2, Gpbar1, Aamp, Pnkd, Tmbim1, 2410125D13Rik, Gm216, Slc11a1, Ctdsp1, Vil1
Downstream geneCyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215E06.bB6Ng01-215E06.g
ACCGA032284GA032285
length9921,190
definitionB6Ng01-215E06.b B6Ng01-215E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,726,412 - 74,727,406)(74,506,055 - 74,507,227)
sequence
gaattcttacttctccgctggtaaagcctaaaacaggatggggcaaactc
tccaaaggaatgatcagtaaatatctttagtagatcagccacaacttccc
agctctactgttgtaggtaaaatgcagccaaagacaacagtaaataaatg
gacaaaggtgcatcccagtaaaatttcatttaaaataaagcaagatttag
tctgcaagctacttttctaatcaccaccttacaataaatcccttcgttaa
agtgaaaactaaaacttctaggacagctaaaacataaagagatacagggc
aacaacgtctgcagactatggtggagctaccgtactgctccaataaacca
agggcagggggcaacttacccaccacccttagtacaagagttcaggtcct
tggcttcctcaggctccttcccaggctggtcaagatggacagaagaaaga
cgagtggccacttcagctacaccaagaggctggagggaagaagggggaac
aggagctctgtcttctccaagtacctgggggtcaactgcagacccacagg
cagggctgggattgagcccatggacatgtgaggcaaggaggtgaatgctg
atcctcttggtacagaagactgtgctgtccaaccccaaggtgtctgaagt
accaggaaggatcgcactgtctaatccaatatcctcctgaggaaaccgct
ggcccatcagaggtttccaccgcctgcttctgttgagaagaccccactgg
aagctggggttcacaaaacaagcctgttcaaactggtagccttgtcgtgg
catcttctccaagcctttttcagccaacttcctcacagcctcagtgaagt
gtacctctttagtagcactctgggaatccgggttttcatccaggccacag
ggatgtgcctccatcctaagttactctgactgcactgggaagaggtacac
tggctgtggatatgttgagggtgctagggatagatgggtgat
gaattcttaaaggaagcacattttgttagttgcactctagtgcttatttg
ctgtttctgtgcagaattcttcctgttatgtcagagacggcagcaccggg
tgtccgctgtgaggaagggggctttgcacagaagctgttttaccctttta
aatcttagaggcagtcagttcttcagagctttaggatgaaaacatcattt
gcttacaaagatagtttaagaaatgtaaaacaaaattctggaatgttttt
ttttgactgctaaactgggtgcccaggtccaatctaaggcagactcggat
gtccccagacatgaggaatgtggagtagcaggcatgcaaaagaaacagag
gagaaggggtgggccgcctgcaagactcaggcaagccaagtccttacaaa
gacagagtttgcgtccgtaagaaaaagaactcactttgaaggtgcagaag
ggctggtgatgcaggaattcaccatttgacaggctctcaatggtctagaa
ctatcagaaaattggagaatatataatgtatacaattgcatcattaaagg
tagatatttaactggtaaagctaattactctacactaaaagtgtcatctt
attccctcctgaaaagtaaacaatatttcaaaataatactaaccatacca
tctctggctctccttgctctaattattgaaataaacagcttttgccaatc
aagtcaagtgtaacacatgagaagaacttagggggaaaccatcttatctt
atttatttttgagcaataaaataataatagctctcagtttattgagattt
cctagatgacaaagcattgaaagtactactgccctttaatagtcacagca
gatttttcccacagataagctgaactttccaaggtcttaaagccaccaaa
aatgcattaaatatagttccgcttcatttccagatcattgatccacagat
atgtaatacaggtcagagtggactatcagctctaccagcagagggcagcc
tggcacaaggtaaaaaacacttctaattagcggaaggaaaaactatttac
cacacctgaagactctatggcatatggcttttgctagtagacttcttgga
gggattttgtatgttaccttacatgatggtactttattaatccagagaaa
aataatcttatgcactgcactcaattaatttggggattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_74726412_74727406
seq2: B6Ng01-215E06.b_41_1032 (reverse)

seq1  ATCACCCCATCTATCCCTAGCACCCTCAACATATCCACAGCCAGTGTTAC  50
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCA-CCCATCTATCCCTAGCACCCTCAACATATCCACAGCCAGTG-TAC  48

seq1  CTCTTCCCAGTGCAGTCAGAGTAACTTTAGGATGGAGGCACATCCCTGTG  100
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTCTTCCCAGTGCAGTCAGAGTAAC-TTAGGATGGAGGCACATCCCTGTG  97

seq1  GCCTGGATGAAAACCCGGATTCCCAGAGTGCTACTAAAGAGGTACACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGATGAAAACCCGGATTCCCAGAGTGCTACTAAAGAGGTACACTTC  147

seq1  ACTGAGGCTGTGAGGAAGTTGGCTGAAAAAGGCTTGGAGAAGATGCCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTGTGAGGAAGTTGGCTGAAAAAGGCTTGGAGAAGATGCCACG  197

seq1  ACAAGGCTACCAGTTTGAACAGGCTTGTTTTGTGAACCCCAGCTTCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCTACCAGTTTGAACAGGCTTGTTTTGTGAACCCCAGCTTCCAGT  247

seq1  GGGGTCTTCTCAACAGAAGCAGGCGGTGGAAACCTCTGATGGGCCAGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTTCTCAACAGAAGCAGGCGGTGGAAACCTCTGATGGGCCAGCGG  297

seq1  TTTCCTCAGGAGGATATTGGATTAGACAGTGCGATCCTTCCTGGTACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCAGGAGGATATTGGATTAGACAGTGCGATCCTTCCTGGTACTTC  347

seq1  AGACACCTTGGGGTTGGACAGCACAGTCTTCTGTACCAAGAGGATCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTTGGGGTTGGACAGCACAGTCTTCTGTACCAAGAGGATCAGCA  397

seq1  TTCACCTCCTTGCCTCACATGTCCATGGGCTCAATCCCAGCCCTGCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTCCTTGCCTCACATGTCCATGGGCTCAATCCCAGCCCTGCCTGT  447

seq1  GGGTCTGCAGTTGACCCCCAGGTACTTGGAGAAGACAGAGCTCCTGTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGCAGTTGACCCCCAGGTACTTGGAGAAGACAGAGCTCCTGTTCC  497

seq1  CCCTTCTTCCCTCCAGCCTCTTGGTGTAGCTGAAGTGGCCACTCGTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTCCCTCCAGCCTCTTGGTGTAGCTGAAGTGGCCACTCGTCTTT  547

seq1  CTTCTGTCCATCTTGACCAGCCTGGGAAGGAGCCTGAGGAAGCCAAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCCATCTTGACCAGCCTGGGAAGGAGCCTGAGGAAGCCAAGGAC  597

seq1  CTGAACTCTTGTACTAAGGGTGGTGGGTAAGTTGCCCCCTGCCCTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCTTGTACTAAGGGTGGTGGGTAAGTTGCCCCCTGCCCTTGGTT  647

seq1  TATTGGAGCAGTACGGTAGCTCCACCATAGTCTGCAGACGTTGTTGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGCAGTACGGTAGCTCCACCATAGTCTGCAGACGTTGTTGCCCT  697

seq1  GTATCTCTTTATGTTTTAGCTGTCCTAGAAGTTTTAGTTTTCACTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTCTTTATGTTTTAGCTGTCCTAGAAGTTTTAGTTTTCACTTTAAC  747

seq1  GAAGGGATTTATTGTAAGGTGGTGATTAGAAAAGTAGCTTGCAGACTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGATTTATTGTAAGGTGGTGATTAGAAAAGTAGCTTGCAGACTAAA  797

seq1  TCTTGCTTTATTTTAAATGAAATTTTACTGGGATGCACCTTTGTCCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTTATTTTAAATGAAATTTTACTGGGATGCACCTTTGTCCATTT  847

seq1  ATTTACTGTTGTCTTTGGCTGCATTTTACCTACAACAGTAGAGCTGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGTTGTCTTTGGCTGCATTTTACCTACAACAGTAGAGCTGGGAA  897

seq1  GTTGTGGCTGATCTACTAAAGATATTTACTGATCATTCCTTTGGAGAGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGCTGATCTACTAAAGATATTTACTGATCATTCCTTTGGAGAGTT  947

seq1  TGCCCCTTCCTGTTTTAGGCTTTACCAGCGGAGAAGTAAGAATTC  995
      |||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCATCCTGTTTTAGGCTTTACCAGCGGAGAAGTAAGAATTC  992

seq1: chr1_74506055_74507227
seq2: B6Ng01-215E06.g_66_1255

seq1  GAATTCTTAAAGGAAGCACATTTTGTTAGTTGCACTCTAGTGCTTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAGGAAGCACATTTTGTTAGTTGCACTCTAGTGCTTATTTG  50

seq1  CTGTTTCTGTGCAGAATTCTTCCTGTTATGTCAGAGACGGCAGCACCGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGTGCAGAATTCTTCCTGTTATGTCAGAGACGGCAGCACCGGG  100

seq1  TGTCCGCTGTGAGGAAGGGGGCTTTGCACAGAAGCTGTTTTACCCTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGCTGTGAGGAAGGGGGCTTTGCACAGAAGCTGTTTTACCCTTTTA  150

seq1  AATCTTAGAGGCAGTCAGTTCTTCAGAGCTTTAGGATGAAAACATCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGAGGCAGTCAGTTCTTCAGAGCTTTAGGATGAAAACATCATTT  200

seq1  GCTTACAAAGATAGTTTAAGAAATGTAAAACAAAATTCTGGAATGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACAAAGATAGTTTAAGAAATGTAAAACAAAATTCTGGAATGTTTTT  250

seq1  TTTTGACTGCTAAACTGGGTGCCCAGGTCCAATCTAAGGCAGACTCGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTGCTAAACTGGGTGCCCAGGTCCAATCTAAGGCAGACTCGGAT  300

seq1  GTCCCCAGACATGAGGAATGTGGAGTAGCAGGCATGCAAAAGAAACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGACATGAGGAATGTGGAGTAGCAGGCATGCAAAAGAAACAGAG  350

seq1  GAGAAGGGGTGGGCCGCCTGCAAGACTCAGGCAAGCCAAGTCCTTACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGGTGGGCCGCCTGCAAGACTCAGGCAAGCCAAGTCCTTACAAA  400

seq1  GACAGAGTTTGCGTCCGTAAGAAAAAGAACTCACTTTGAAGGTGCAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTTTGCGTCCGTAAGAAAAAGAACTCACTTTGAAGGTGCAGAAG  450

seq1  GGCTGGTGATGCAGGAATTCACCATTTGACAGGCTCTCAATGGTCTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGATGCAGGAATTCACCATTTGACAGGCTCTCAATGGTCTAGAA  500

seq1  CTATCAGAAAATTGGAGAATATATAATGTATACAATTGCATCATTAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGAAAATTGGAGAATATATAATGTATACAATTGCATCATTAAAGG  550

seq1  TAGATATTTAACTGGTAAAGCTAATTACTCTACACTAAAAGTGTCATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTAACTGGTAAAGCTAATTACTCTACACTAAAAGTGTCATCTT  600

seq1  ATTCCCTCCTGAAAAGTAAACAATATTTCAAAATAATACTAACCATACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCCTGAAAAGTAAACAATATTTCAAAATAATACTAACCATACCA  650

seq1  TCTCTGGCTCTCCTTGCTCTAATTATTGAAATAAACAGC-TTTGCCAATC  699
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTCTGGCTCTCCTTGCTCTAATTATTGAAATAAACAGCTTTTGCCAATC  700

seq1  AAGTCAAGTGTAACACATGAGAAGAACTTAGGGGGAAACCATCTTATCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAGTGTAACACATGAGAAGAACTTAGGGGGAAACCATCTTATCTT  750

seq1  ATTTATTTTTGAGCAATAAAATAATAATAGCTCTCAGTTTATTGAGATTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTGAGCAATAAAATAATAATAGCTCTCAGTTTATTGAGATTT  800

seq1  CCTAGATGAC-AAGCATTGAAAGTACTACTGCCC-TTAATAGTCACAGCA  847
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  CCTAGATGACAAAGCATTGAAAGTACTACTGCCCTTTAATAGTCACAGCA  850

seq1  GA-TTTTCCCACAGATAAGCTGAACTTTCCAAGGTCTTAAAGCCACCAAA  896
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCCCACAGATAAGCTGAACTTTCCAAGGTCTTAAAGCCACCAAA  900

seq1  AATGCATTAAAATATAG-TCCGCTTCATTT-CAGATCATTGATCACAAGA  944
      |||||||| |||||||| |||||||||||| |||||||||||||   |||
seq2  AATGCATT-AAATATAGTTCCGCTTCATTTCCAGATCATTGATCCACAGA  949

seq1  TATGTAATACA-GTCAGAG-GGACTAACAGCTCTACCAGCAGAGGGCAGC  992
      ||||||||||| ||||||| |||||| |||||||||||||||||||||||
seq2  TATGTAATACAGGTCAGAGTGGACTATCAGCTCTACCAGCAGAGGGCAGC  999

seq1  CT-GCACCAAGT-AAAAACACTTCTAA-TAGCGGAAAGAAAAACAATTAC  1039
      || |||| | || |||||||||||||| |||||||| ||||||| |||  
seq2  CTGGCACAAGGTAAAAAACACTTCTAATTAGCGGAAGGAAAAACTATTTA  1049

seq1  ACACA-CTGAAGACTCTA-GGCATATG--CTTTGCTAGTAGAC-TCTTG-  1083
       |||| |||||||||||| ||||||||   ||||||||||||| ||||| 
seq2  CCACACCTGAAGACTCTATGGCATATGGCTTTTGCTAGTAGACTTCTTGG  1099

seq1  -AGGATTTTGTATGTAAACTTACATGAT-GTAATTTATAAATCCAAGAGA  1131
        ||||||||||||| | |||||||||| ||| ||||| ||||| |||||
seq2  AGGGATTTTGTATGTTACCTTACATGATGGTACTTTATTAATCC-AGAGA  1148

seq1  AATAT-ATCTTATGAAATTGCA-TCAATTAATTTGGGGAATTGT  1173
      || || ||||||||  | |||| ||||||||||||||| |||||
seq2  AAAATAATCTTATG-CACTGCACTCAATTAATTTGGGG-ATTGT  1190