BAC Information

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BAC

Clone NameB6Ng01-215H09
Chromosome1 (Build37)
Map Location 132,274,416 - 132,275,193
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215H09.bB6Ng01-215H09.g
ACCGA032423GA032424
length1,188779
definitionB6Ng01-215H09.b B6Ng01-215H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatatcgaatggcagagaagcacctgaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagca
gatgctggcgtggatgtggagaaagaggaacactcctccattgttgatgg
gattgcaggcttgtacaaccactctggaaatcagtctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctgggca
tatatccagaagatgccccaactggtaagaaggacacatgctccactatc
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatctacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctagccaaa
tggatggacctggagggcatcatcctgagtgaggtaacacattcacaaag
taactcacacaatatgtactcactgataagtggatactagccccaaacct
aggatacccaagatataagatacaatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatacccagggatccaccccatattca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaaatggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagtacccaaggagctaaggggatctgcaacccta
taggtggaacaacattatgaactaaccagtaccccggagctcttgacctc
tagctgcatatgtatcaaaaagaatggccctagtcgggccatcactgtaa
ggagaaggtccattcacttgcaacttatatgcccagtacaggcaccgcca
ggcccagacggtggaagtgtggctgtagtaggcgcagt
gaattctcacacacacacaaacacacacacacacacacgctctaggcacg
tgctcagatcgttcacagatagcctgacaggtcccaatcacgaggaacag
gcagctcatgcatgcagcctcactgcgcatgctcgggcaaggcagtaaac
aagtgggttttacggggcctgcggccgcacctgcttcctacacacagcat
ggtggtgtagattataagattggacaagaccactagcatgttcctacagc
agcctatctggcatctttcgcactgtgaatgctaccccgcatgaagggag
cttccagctcagttctagattgatttctctgcaccatgcaaaccaagtgt
gtgatttcttcagtggtgggatcttatcagctagcgccagtgtgcggtca
agaagtgtagcaagaacacatactctgggcctttatgaacaactcataag
gaagtgtctcccagctaggggaggaaggtggtgcatgcctttaatcccag
cactaggaggcagaggcaggctgatctcagagttcaaggccagcctggta
tacagagtaagatccaggagaaccagggctacacagagataccctgtttc
aacaaacaacaacaaaaggaagtatctcgcatctggacctgggggttttg
tttggtaaccttggcttccaggtgcagttaccagtcctgccaaatatttc
ccttataaatctgtttaatttaacatatttttaaaattagcttaccaaat
attaaagttctgttgttttattctatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132274416_132275193
seq2: B6Ng01-215H09.g_65_843

seq1  GAATTCTCACACACACACACACACACACACACACACACGCTCTAGGCACG  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAATTCTCACACACACACAAACACACACACACACACACGCTCTAGGCACG  50

seq1  TGCTCAGATCGTTCACAGATAGCCTGACAGGTCCCAATCACGAGGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGATCGTTCACAGATAGCCTGACAGGTCCCAATCACGAGGAACAG  100

seq1  GCAGCTCATGCATGCAGCCTCACTGCGCATGCTCGGGCAAGGCAGTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCATGCATGCAGCCTCACTGCGCATGCTCGGGCAAGGCAGTAAAC  150

seq1  AAGTGGGTTTTACGGGGCCTGCGGCCGCACCTGCTTCCTACACACAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGTTTTACGGGGCCTGCGGCCGCACCTGCTTCCTACACACAGCAT  200

seq1  GGTGGTGTAGATTATAAGATTGGACAAGACCACTAGCATGTTCCTACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTAGATTATAAGATTGGACAAGACCACTAGCATGTTCCTACAGC  250

seq1  AGCCTATCTGGCATCTTTCGCACTGTGAATGCTACCCCGCATGAAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATCTGGCATCTTTCGCACTGTGAATGCTACCCCGCATGAAGGGAG  300

seq1  CTTCCAGCTCAGTTCTAGATTGATTTCTCTGCACCATGCAAACCAAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGCTCAGTTCTAGATTGATTTCTCTGCACCATGCAAACCAAGTGT  350

seq1  GTGATTTCTTCAGTGGTGGGATCTTATCAGCTAGCGCCAGTGTGCGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTTCAGTGGTGGGATCTTATCAGCTAGCGCCAGTGTGCGGTCA  400

seq1  AGAAGTGTAGCAAGAACACATACTCTGGGCCTTTATGAACAACTCATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTAGCAAGAACACATACTCTGGGCCTTTATGAACAACTCATAAG  450

seq1  GAAGTGTCTCCCAGCTAGGGGAGGAAGGTGGTGCATGCCTTTAATCCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTCTCCCAGCTAGGGGAGGAAGGTGGTGCATGCCTTTAATCCCAG  500

seq1  CACTAGGAGGCAGAGGCAGGCTGATCTCAGAGTTCAAGGCCAGCCTGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGAGGCAGAGGCAGGCTGATCTCAGAGTTCAAGGCCAGCCTGGTA  550

seq1  TACAGAGTAAGATCCAGGAGAACCAGGGCTACACAGAGATACCCTGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTAAGATCCAGGAGAACCAGGGCTACACAGAGATACCCTGTTTC  600

seq1  AACAAACAACAACAAAAGGAAGTATCTCGCATCTGGACCTGGGGGTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAACAACAAAAGGAAGTATCTCGCATCTGGACCTGGGGGTTTTG  650

seq1  TTTGGTAACCTTTGGCTTCCAGGTGCAGTTACCAGTCCTGCCAAATATTT  700
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAACC-TTGGCTTCCAGGTGCAGTTACCAGTCCTGCCAAATATTT  699

seq1  CCCTTATAAATCTGTTTTATTTAACATATTTTTAAAATTAGCTTACCAAA  750
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCCTTATAAATCTGTTTAATTTAACATATTTTTAAAATTAGCTTACCAAA  749

seq1  TAGT-AAGTTCTG-TGTTTTATTCTATCCT  778
      || | |||||||| ||||||||||||||||
seq2  TATTAAAGTTCTGTTGTTTTATTCTATCCT  779