BAC Information

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BAC

Clone NameB6Ng01-215I22
Chromosome1 (Build37)
Map Location 112,839,320 - 112,839,774
singlet/doubletsinglet
Overlap geneCdh19
Upstream geneCdh7, LOC100041429, EG626652
Downstream geneEG666578, Dsel, LOC547247
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215I22.bB6Ng01-215I22.g
ACCGA032486GA032487
length1,150449
definitionB6Ng01-215I22.b B6Ng01-215I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaaaatgaaggcacagcatacccaaatacatgagacacaat
gaaagcagtgctaagaggaaaagtcatagcattatgtgccttcataaaca
aattaaagagatcctatactagcaacttagtatatctgaaagctctagaa
gaaaaagaagcaaactcactcaagtggagtagatggaagaaaatagtcaa
actcagggctaaaatcaaccaaacagaaacgaagagaatgatacaaagaa
tcaacaaaactaaaaattggatccttgagaaaatcaacaaattagaggaa
tccttgggcaaattaacaaaaaggtacagagacagtatccaaattagcaa
aattagaaataaaagtgcagaaataacaacagaaagtgagtaaattaaaa
aaaacaaaaacaaaacaaacaaacaaacaaaaaaaaaaaaccaaaacaac
aacaacaaaaaaaacccaccaggtctaactacaaaggtctaactgcaaag
ataaaactggaaaatctagaaaaaatgattttctaaatagataccttgta
caaaagttatgtcaaggtcaggtaaactaaacatttctataatccctaag
gaaatagaagcagtcatttagagcctcccaatcgccgccccctaaatgcc
cagggcaagacagttttagtccagaattctatcagaccttcaaagaatag
ctaataccaaccctcctcaaactattcaacaaaatagacacagaaggaac
actacagaattcattctatgaagcaacagttactctgatatctaaattat
acaaaaacccaactaagaaagagaacttcacaccaattttgcttatgaat
agcaatgcaaaaatactcaataaaattctcacaaaataaatccaagaaca
cattaatatcatcattaaataccatcaggatgcagggatagttcagtata
tgaaaatccatgaccataatcactattgtgagtttatgctgctatactat
gtaatctgagtcttcaaattgtttgaattacatggtggacctgctacagt
gcttgatttttcattagttttggtgtctattgcttggcagcagacgaggt
gaactttagatctgacaggaacgagattgtagggagggccaatatttccc

ctagctctagctgcatatgtatctgaggatggcctagtcggccattactg
gaaagagaggcccattggtcgtgcagactttatatgcctccgtgcatgcc
agtgccaggaagtgggagtgggcaggtgggggactggttggggagggtgt
gcgggactttacggatagcactggagatgtgaatgaagaaagtacctaat
tttaaaaaaaggggggggagtgggatacaaaacctctttatattacttgt
aatttctgggatgttaaggaattacctaccaaatataataagattgtgtc
atttaggacttactagtacgtgatgatctttgtactaatacaattgggtt
tcattgtgcatggataggcagacctctgataaaatagtgacttgtctaat
gaatctaattactttaaccgtctaattaatattttcactatttcatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112839320_112839774
seq2: B6Ng01-215I22.g_67_521 (reverse)

seq1  ACCATGAAATAGTGAAAATATTAATTAGACGGTTAAAGTAATTAGGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCATGAAATAGTGAAAATATTAATTAGACGGTTAAAGTAATTAGATTCA  50

seq1  TTAGACAAGTCACTATTTTATCAGAGGTCTGCCTATCCATGCACAATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAAGTCACTATTTTATCAGAGGTCTGCCTATCCATGCACAATGAA  100

seq1  ACCCAATTGTATTAGTACAAAGATCATCACGTACTAGTAAGTCCTAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAATTGTATTAGTACAAAGATCATCACGTACTAGTAAGTCCTAAATG  150

seq1  ACACAATCTTATTATATTTGGTAGGTAATTCCTTAACATCCCAGAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCTTATTATATTTGGTAGGTAATTCCTTAACATCCCAGAAATTA  200

seq1  CAAGTAATATAAAGAGGTTTTGTATCCCACTCCCCCCCCTTTTTTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAATATAAAGAGGTTTTGTATCCCACTCCCCCCCCTTTTTTTAAAA  250

seq1  TTAGGTACTTTCTTCATTCACATCTCCAGTGCTATCCGTAAAGTCCCGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTACTTTCTTCATTCACATCTCCAGTGCTATCCGTAAAGTCCCGCA  300

seq1  CACCCTCCCCAACCAGTCCCCCACCTGCCCACTCCCACTTCCTGGCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCCCAACCAGTCCCCCACCTGCCCACTCCCACTTCCTGGCACTG  350

seq1  GCATGCACGGAGGCATATAAAGTCTGCACGACCAATGGGCCTCTCTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCACGGAGGCATATAAAGTCTGCACGACCAATGGGCCTCTCTTTCC  400

seq1  AGTAATGGCCGACTAGGCCATCCTCAGATACATATGCAGCTAGAGCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGGCCGACTAGGCCATCCTCAGATACATATGCAGCTAGAGCTAGG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455