BAC Information

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BAC

Clone NameB6Ng01-216B18
Chromosome1 (Build37)
Map Location 49,579,615 - 49,580,676
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674566, LOC100041936, LOC666903, LOC666909, 2900045O20Rik, LOC666924, C230029F24Rik, LOC627430, LOC100041981
Downstream geneEG666962, EG666970, LOC100041993
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216B18.bB6Ng01-216B18.g
ACCGA032883GA032884
length1,1581,060
definitionB6Ng01-216B18.b B6Ng01-216B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacaatgtcatctgaagactgctagcagaatgctggtttacagg
ctgctaggatgagggtcttagagcccacacccacagtgtcacatctattc
caacaaggtcacacctactccaacagggccatatcttctaatagtgccac
ttacaaaccataacattccacttcctggcaaacataggctttttcaaaca
tttaagtgtatgggtgtcatgcctaaagataacatactgcaaaatacatt
tagtccaacttcaaaataccacatagtctacagtagtctcaacaatgtta
aaaatccaaagttctaagtctctcctgagattcatctagtcactgaactg
taacccccaaagaaaaagaggaaaatagctggtcaaactccaaactctgc
atctccatgtctgatgtcaaagtagtctttggatctctaacccctttttc
atcttatttttttaactatttatttatctttttttttctttttaaaagta
cagtcattaaccccattctggtgtgccctctgaatgttttcatcccataa
ctactccttaatctccaagacgatgtctccacaccccaccagatctccct
acttcctgaggcctcaagtctctcaagggttaggtgcctcttttctcact
gaggacagaccctgaagtcctctgctgtatacgcatcaggcctcatatta
cctggagtatgctgcctgattagtggctcagtgtcttacagaacttgggg
gggtccaggttagttgagactgctggtcttcctatgggattaccatttag
cttttccagactttcccttatttaaccacactggtctctggcttcagtct
attggttgggtgcaagaatttgcatctgactttcagctttctttttgagc
ctcttggagggcagccatgctaagggtacttgttctgagagcacaccata
attatcagaaaatagtgtcaagcctccttgagctgggatcccaaatttga
gccttgttcacaaggattcgccctttcttcagactcttctcaattttttg
tccttacagttcttttagacaggaagatttctgggttcataacatttttg
actgtgcatgacatttccattccaagcaatctatcctctttgcgttctat
ctttctat
gaattcacaatgaagacacacatggatcagagcaagccagagaaatattc
agattgaaggaaaaggactaactgtctggtaaatatattgcttagagggt
tagaatacatgaatatatgctcagtccatgcttaaagcttttcactaaaa
tgaatagttcttcatatcaattattttggtagtagaatgtgagtagataa
ggatttcatatttaaattatagattacatttgttgggtagttgggctata
aaatccaatcttaggaagaaccagtcttagactctgaaaaatctgggtga
gaggcatactaacaagcaccccctgggaacagagcaggttcctagaaaat
ttacagagaactgaagctgaatatatgtcaaagatgccccttactagaga
ggcagtctcagagacaagcacagagtgcagagaatctctgctgtacacca
agattggtggaacataggagctgccagctaaaagaggagggctatgcagc
tcctgttgctgaagactagaagccaggacaggacattaaatggttttctc
agcactgcatgcagccaatagtagagacaagcagtgatagcttcagtgat
ttacccccatgcactgtgaagttctggagaaggatcagaatgtatgctat
ccttggaacaagggagaccaccttttgtgaagcaagatggatggcttgct
acaggaatggaggaatcaaggcctcaggatattttcaggagcttcagcac
aatggttcaatctgtgccatgccatggtggaggagaagttgaacatatag
taaggctcaatccctagttaacccccacaaatttgagacttgggagatga
cagttacaaacactcagaaaaaagcaaagccccttccctatggacagaaa
aaaataggggcagtgcagatcacaccatgaaaggcagagccagccacaaa
cctaaaggaagaaactagagcactgattaggtaaaaaaaagtttgaatat
atgcaaatactgtctgcatttgtgctgatatggatggaatccttgggtgg
gcagtctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_49579615_49580676
seq2: B6Ng01-216B18.g_67_1126 (reverse)

seq1  CAGAGACTGCCCCACCCAGGGA-TCCATCCCATAATCAGCCACAAAATGC  49
      ||||||||| |||||||| ||| ||||| |||| ||||| ||| ||||||
seq2  CAGAGACTG-CCCACCCAAGGATTCCAT-CCAT-ATCAG-CAC-AAATGC  45

seq1  AGACAGTA-TTGCATATA-TCAAACTTTTTTTTTAACCTAATCAGTGCTC  97
      |||||||| ||||||||| ||||||||||||||  |||||||||||||||
seq2  AGACAGTATTTGCATATATTCAAACTTTTTTTT--ACCTAATCAGTGCTC  93

seq1  TAGTTTCTTCCTTTA-GTTTGTGGCTGGCTTCTGCCTTTCATGGTGTGAT  146
      ||||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  TAGTTTCTTCCTTTAGGTTTGTGGCTGGC-TCTGCCTTTCATGGTGTGAT  142

seq1  CTGCACTGCCCCTATTTTTTTCTGTCCATAGGG-AGGGGCTTTGCTTTTT  195
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGCACTGCCCCTATTTTTTTCTGTCCATAGGGAAGGGGCTTTGCTTTTT  192

seq1  TCTGAGTGTTTGTAACTGTCATCTCCCAAGTCTCAAATTTGT-GGGGTTA  244
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGAGTGTTTGTAACTGTCATCTCCCAAGTCTCAAATTTGTGGGGGTTA  242

seq1  ACTAGGGATTGAGCCTTACTATATGTTCAACTTCTCCTCCACCATGGCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGATTGAGCCTTACTATATGTTCAACTTCTCCTCCACCATGGCAT  292

seq1  GGCACAGATTGAACCATTGTGCTGAAGCTCCTGAAAATATCCTGAGGCCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGATTGAACCATTGTGCTGAAGCTCCTGAAAATATCCTGAGGCCT  342

seq1  TGATTCCTCCATTCCTGTAGCAAGCCATCCATCTTGCTTCACAAAAGGTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTCCATTCCTGTAGCAAGCCATCCATCTTGCTTCACAAAAGGTG  392

seq1  GTCTCCCTTGTTCCAAGGATAGCATACATTCTGATCCTTCTCCAGAACTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTTGTTCCAAGGATAGCATACATTCTGATCCTTCTCCAGAACTT  442

seq1  CACAGTGCATGGGGGTAAATCACTGAAGCTATCACTGCTTGTCTCTACTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGCATGGGGGTAAATCACTGAAGCTATCACTGCTTGTCTCTACTA  492

seq1  TTGGCTGCATGCAGTGCTGAGAAAACCATTTAATGTCCTGTCCTGGCTTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGCATGCAGTGCTGAGAAAACCATTTAATGTCCTGTCCTGGCTTC  542

seq1  TAGTCTTCAGCAACAGGAGCTGCATAGCCCTCCTCTTTTAGCTGGCAGCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTCAGCAACAGGAGCTGCATAGCCCTCCTCTTTTAGCTGGCAGCT  592

seq1  CCTATGTTCCACCAATCTTGGTGTACAGCAGAGATTCTCTGCACTCTGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTTCCACCAATCTTGGTGTACAGCAGAGATTCTCTGCACTCTGTG  642

seq1  CTTGTCTCTGAGACTGCCTCTCTAGTAAGGGGCATCTTTGACATATATTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCTGAGACTGCCTCTCTAGTAAGGGGCATCTTTGACATATATTC  692

seq1  AGCTTCAGTTCTCTGTAAATTTTCTAGGAACCTGCTCTGTTCCCAGGGGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAGTTCTCTGTAAATTTTCTAGGAACCTGCTCTGTTCCCAGGGGG  742

seq1  TGCTTGTTAGTATGCCTCTCACCCAGATTTTTCAGAGTCTAAGACTGGTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTAGTATGCCTCTCACCCAGATTTTTCAGAGTCTAAGACTGGTT  792

seq1  CTTCCTAAGATTGGATTTTATAGCCCAACTACCCAACAAATGTAATCTAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGATTGGATTTTATAGCCCAACTACCCAACAAATGTAATCTAT  842

seq1  AATTTAAATATGAAATCCTTATCTACTCACATTCTACTACCAAAATAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAATATGAAATCCTTATCTACTCACATTCTACTACCAAAATAATT  892

seq1  GATATGAAGAACTATTCATTTTAGTGAAAAGCTTTAAGCATGGACTGAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAAGAACTATTCATTTTAGTGAAAAGCTTTAAGCATGGACTGAGC  942

seq1  ATATATTCATGTATTCTAACCCTCTAAGCAATATATTTACCAGACAGTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCATGTATTCTAACCCTCTAAGCAATATATTTACCAGACAGTTA  992

seq1  GTCCTTTTCCTTCAATCTGAATATTTCTCTGGCTTGCTCTGATCCATGTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTTCCTTCAATCTGAATATTTCTCTGGCTTGCTCTGATCCATGTG  1042

seq1  TGTCTTCATTGTGAATTC  1062
      ||||||||||||||||||
seq2  TGTCTTCATTGTGAATTC  1060