BAC Information

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BAC

Clone NameB6Ng01-216O21
Chromosome1 (Build37)
Map Location 186,224,176 - 186,225,240
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216O21.bB6Ng01-216O21.g
ACCGA033485GA033486
length7031,078
definitionB6Ng01-216O21.b B6Ng01-216O21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaaatggatgcatctggaggatatcattct
gagtgaggtaacccaattacaaaagaacacacgcgatatacactcattgg
taaatggatattagcccagaaacttagaatactcaagatacaatttgcaa
aacacatcaaattcaagaagaaggaagaccaaagtgtggatactttgctc
cttcttagaatggggaacaaaatacccatggaaggagttataagacaaag
tttggagctgagacggaaggaaagaccatccagagactgccccacccagg
gatccatcccatatacaaccaccaaacccaggcactattgcatatgccag
aaagattttgctgacaggaccctggcatagctctgttttgtgaggctatg
ctagtgcctggcaaatacagaagtggatgctcacagtcatctattgggtg
gaacacagggcccctaatgaaggagctagagaaagtacccaaggagctga
aggggtctgcaaccctatatgtggaacagcaatatgaactaaccagtacc
cccagagctgtgtctctagttgcatatgtagcagaggatggcatagtcgg
ccatcaatgggaagagaggcccttggccttgcgaagatcatatgccccag
tacaggggattgccagggccaagaagcaggagtgggtgggttggggagca
ggg

gaattcacctgcttacgaattccagataactcttgtgaagatggatggct
tttgttgttttaggtgagtgaacctttaggtcttcacttattggactttg
ctagaaaactactgtgaggaaaagctttgctgccttgggatgagtgaaag
tagtttggctccggaatttgtacagtgtgtactatatatggagatactac
accagttaagagtattttaaggggctggagagatggctcagaggttagga
ggactgactgctcttccagaggtcctgagttcaattcccagcaacctcgt
ggtggctcacaaccatctgtagtgagttctagtgccctgctctggtgtgt
ctgaagagagagacagtgtattcacatagattagatagatagatagatag
atagatagatagatagatagatagatagatagatagacaattaaacaaaa
cttttaaagaaaaagaatattttaagcccttcaaatctgctatgggacat
gtgtattcttctcttaacatctttgtttcttgtatgtgcactaagctact
aaacagtaggagtgggtgcatctgattctagcccaggtgttacttacaat
tagagtgtctaattaattatacagaattaagattgctaactaaagcgaag
agtgtccccagtacagtgagatctgctcaagaatgctgctgcagaggctg
cttcgaccaagactttctggagaaacctgcatttgtgtcatctttctgtc
tcaagagtcgcttcctatctgtcatctttataaatcaaaggacaaaaatc
tgcccacccctcctgtttgcccagggttaccagaagtgcatgagccatca
ttttacagggggcaacagacatttgcttgagggaatacttcttattacag
gcacccagcttagacaacttgtggaacctagtgtgtttttgttttaacca
aaggctaaagctggggttaggagacagctcagcaaggtattttactgtca
agctgaaaacttgcctgcgacttctaggacttatataatagcccagtatt
ggtgttcaccctagtaaatccagtatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186224176_186225240
seq2: B6Ng01-216O21.g_69_1146

seq1  GAATTCACCTGCTTACGAATTCCAGATAACTCTTGTGAAGATGGATGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGCTTACGAATTCCAGATAACTCTTGTGAAGATGGATGGCT  50

seq1  TTTGTTGTTTTAGGTGAGTGAACCTTTAGGTCTTCACTTATTGGACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTTAGGTGAGTGAACCTTTAGGTCTTCACTTATTGGACTTTG  100

seq1  CTAGAAAACTACTGTGAGGAAAAGCTTTGCTGCCTTGGGATGAGTGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAACTACTGTGAGGAAAAGCTTTGCTGCCTTGGGATGAGTGAAAG  150

seq1  TAGTTTGGCTCCGGAATTTGTACAGTGTGTACTATATATGGAGATACTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGGCTCCGGAATTTGTACAGTGTGTACTATATATGGAGATACTAC  200

seq1  ACCAGTTAAGAGTATTTTAAGGGGCTGGAGAGATGGCTCAGAGGTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTAAGAGTATTTTAAGGGGCTGGAGAGATGGCTCAGAGGTTAGGA  250

seq1  GGACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCTCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCTCGT  300

seq1  GGTGGCTCACAACCATCTGTAGTGAGTTCTAGTGCCCTGCTCTGGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCTGTAGTGAGTTCTAGTGCCCTGCTCTGGTGTGT  350

seq1  CTGAAGAGAGAGACAGTGTATTCACATAGATTAGATAGATAGATAGATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAGAGAGACAGTGTATTCACATAGATTAGATAGATAGATAGATAG  400

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGATAGACAATTAAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATAGATAGATAGACAATTAAACAAAA  450

seq1  CTTTTAAAGAAAAAGAATATTTTAAGCCCTTCAAATCTGCTATGGGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAGAAAAAGAATATTTTAAGCCCTTCAAATCTGCTATGGGACAT  500

seq1  GTGTATTCTTCTCTTAACATCTTTGTTTCTTGTATGTGCACTAAGCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCTTCTCTTAACATCTTTGTTTCTTGTATGTGCACTAAGCTACT  550

seq1  AAACAGTAGGAGTGGGTGCATCTGATTCTAGCCCAGGTGTTACTTACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTAGGAGTGGGTGCATCTGATTCTAGCCCAGGTGTTACTTACAAT  600

seq1  TAGAGTGTCTAATTAATTATACAGAATTAAGATTGCTAACTAAAGCGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGTCTAATTAATTATACAGAATTAAGATTGCTAACTAAAGCGAAG  650

seq1  AGTGTCCCCAGTACAGTGAGATCTGCTCAAGAATGCTGCTGCAGAGGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCCAGTACAGTGAGATCTGCTCAAGAATGCTGCTGCAGAGGCTG  700

seq1  CTTCGACCAAGACTTTCTGGAGAAACCTGCA-TTGTGTCATCTTTCTGTC  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTCGACCAAGACTTTCTGGAGAAACCTGCATTTGTGTCATCTTTCTGTC  750

seq1  TCAAGAGTCGCTTCCTATCTGTCATCTTTATAAATCAAAGGACAAAAATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGTCGCTTCCTATCTGTCATCTTTATAAATCAAAGGACAAAAATC  800

seq1  TGCCCACCCCTCCTG-TTGCCCAGGGTTACCAGAAGTGCATGAGCCATCA  848
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGCCCACCCCTCCTGTTTGCCCAGGGTTACCAGAAGTGCATGAGCCATCA  850

seq1  -TTTACA-GGGGCAACAGACATTTGC-TGAGGGAATACT--CTATTACAG  893
       |||||| |||||||||||||||||| ||||||||||||   ||||||||
seq2  TTTTACAGGGGGCAACAGACATTTGCTTGAGGGAATACTTCTTATTACAG  900

seq1  GCACCCAGC-TAGACA--CTGTGGAACCTAGTGTG-TTTTGTTTTAAACA  939
      ||||||||| ||||||   |||||||||||||||| ||||||||||| ||
seq2  GCACCCAGCTTAGACAACTTGTGGAACCTAGTGTGTTTTTGTTTTAACCA  950

seq1  AA-GCTAAGGCTGGG--TAGGAAGACAGCCCAGC-AGGTA-TTTACTGTC  984
      || ||||| ||||||  |||| ||||||| |||| ||||| |||||||| 
seq2  AAGGCTAAAGCTGGGGTTAGG-AGACAGCTCAGCAAGGTATTTTACTGT-  998

seq1  CAAGCCTGAAAAACTGCCTTCGAACTCTAGGACCTATATAAAAAGCCAGG  1034
      |||| |||||||  ||||| |||  |||||||| ||||||| |  |||| 
seq2  CAAG-CTGAAAACTTGCCTGCGACTTCTAGGACTTATATAATAGCCCAGT  1047

seq1  TATAGTGTACACCCTAGTAATCCCAGTATCC  1065
        | |||| |||||||||||  |||||||||
seq2  ATTGGTGTTCACCCTAGTAAATCCAGTATCC  1078


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