BAC Information

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BAC

Clone NameB6Ng01-217F05
Chromosome1 (Build37)
Map Location 116,107,200 - 116,108,117
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217F05.bB6Ng01-217F05.g
ACCGA033768GA033769
length995930
definitionB6Ng01-217F05.b B6Ng01-217F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttca
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagagggtgttgtttccctaaattcttctcagcc
gaattcactctcgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcaccatcttataatggcgattgctcgctgcacacacggct
ctcctcagagattactggcggcacacatgcgattgcttgcagcacgtacc
ggctctccacacccttgggctatttccagcacatcaaaaacccagcaacc
cacatagcattctcatactttattttactcttcaaagtactggatgcttg
ctttccctctaccatatttcacttctgcacaaattaatttcaggaaacag
cctcctcaggaatctcctataacctatgaactctgcatttggagctccac
agaaatatgggaaaaggccctagcaactggaagattgcagtgctgtgtta
agaaatgctgagacaacaacacagaggtaggcatttctatgcaaattcac
atgggccctgatgatcaagcaggattcccctcctgtttctctatttcttt
acttaatagcttttactgctctagtagctttcatcctcaaatccagaaat
gtatttggtgtctattgctagcaaccggtgttttgtgtttctgcctcctc
cacactcagcatgagaataccaagcatgaacaatgtacatatgctatata
ggtatgtggtaattttgtagagtaccaaatctattgaaacttttgaattt
ttgagtctctgaagagctggctatgtaaatataagaattgaattcaaatg
aaaaatgactgcttcagaagaaaacagctaatttcagcttcattaccatc
caattatgaatgacagtgtcttaaaatgtgtggttttcaaaatttataaa
atgatgtttgcaggtttattaacgttgtcatatgatttcacagttgtaaa
ggccattttgaatccacatcttgtcttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116107200_116108117
seq2: B6Ng01-217F05.g_71_1000 (reverse)

seq1  AAGATGACAAG-TGTGGATCCAAA--TGCCTTTAC-ACTGTG-AATCATA  45
      |||| |||||| ||||||| ||||   |||||||| |||||| |||||||
seq2  AAGAAGACAAGATGTGGATTCAAAATGGCCTTTACAACTGTGAAATCATA  50

seq1  TGAC-ACGTT-ATAAACCTGCAAACATCATTTTATAAAATTTTGAATA-C  92
      |||| ||||| |||||||||||||||||||||||| |||||||||| | |
seq2  TGACAACGTTAATAAACCTGCAAACATCATTTTAT-AAATTTTGAAAACC  99

seq1  ACACATTTT-AGACACTGTCATTCATAATTGGATGGTAATGAAGCTGGAA  141
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  ACACATTTTAAGACACTGTCATTCATAATTGGATGGTAATGAAGCTGAAA  149

seq1  TTAGCTGTTTTCTTCTGAAGCAGTCA-TTTTCATTTGAATTCAATTCTTA  190
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAGCTGTTTTCTTCTGAAGCAGTCATTTTTCATTTGAATTCAATTCTTA  199

seq1  TATTTACATAGCCAGCTCTTCAGAGACTCAAAAATTC-AAAGTTTCAATA  239
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTTACATAGCCAGCTCTTCAGAGACTCAAAAATTCAAAAGTTTCAATA  249

seq1  GATTTGGTACTCTACAAAATTACCACATACCTATATAGCATATGTACATT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGTACTCTACAAAATTACCACATACCTATATAGCATATGTACATT  299

seq1  GTTCATGCTTGGTATTCTCATGCTGAGTGTGGAGGAGGCAG-AACAC-AA  337
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  GTTCATGCTTGGTATTCTCATGCTGAGTGTGGAGGAGGCAGAAACACAAA  349

seq1  ACACCGGTTGCTAGCAATAGACACCAAATACATTTCTGGATTTGAGGATG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGTTGCTAGCAATAGACACCAAATACATTTCTGGATTTGAGGATG  399

seq1  AAAGCTACTAGAGCAGTAAAAGCTATTAAGTAAAGAAATAGAGAAACAGG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACTAGAGCAGTAAAAGCTATTAAGTAAAGAAATAGAGAAACAGG  449

seq1  AGGGGAATCCTGCTTGATCATCAGGGCCCATGTGAATTTGCATAGAAATG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAATCCTGCTTGATCATCAGGGCCCATGTGAATTTGCATAGAAATG  499

seq1  CCTACCTCTGTGTTGTTGTCTCAGCATTTCTTAACACAGCACTGCAATCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTCTGTGTTGTTGTCTCAGCATTTCTTAACACAGCACTGCAATCT  549

seq1  TCCAGTTGCTAGGGCCTTTTCCCATATTTCTGTGGAGCTCCAAATGCAGA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTGCTAGGGCCTTTTCCCATATTTCTGTGGAGCTCCAAATGCAGA  599

seq1  GTTCATAGGTTATAGGAGATTCCTGAGGAGGCTGTTTCCTGAAATTAATT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAGGTTATAGGAGATTCCTGAGGAGGCTGTTTCCTGAAATTAATT  649

seq1  TGTGCAGAAGTGAAATATGGTAGAGGGAAAGCAAGCATCCAGTACTTTGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGAAGTGAAATATGGTAGAGGGAAAGCAAGCATCCAGTACTTTGA  699

seq1  AGAGTAAAATAAAGTATGAGAATGCTATGTGGGTTGCTGGGTTTTTGATG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAATAAAGTATGAGAATGCTATGTGGGTTGCTGGGTTTTTGATG  749

seq1  TGCTGGAAATAGCCCAAGGGTGTGGAGAGCCGGTACGTGCTGCAAGCAAT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAATAGCCCAAGGGTGTGGAGAGCCGGTACGTGCTGCAAGCAAT  799

seq1  CGCATGTGTGCCGCCAGTAATCTCTGAGGAGAGCCGTGTGTGCAGCGAGC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGTGTGCCGCCAGTAATCTCTGAGGAGAGCCGTGTGTGCAGCGAGC  849

seq1  AATCGCCATTATAAGATGGTGCGGGCCTCCGCTGTGCCTAACTAGTAAAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCCATTATAAGATGGTGCGGGCCTCCGCTGTGCCTAACTAGTAAAC  899

seq1  AAGCCTTGTACGCAGGTGCGAGAGTGAATTC  918
      |||||||||||||||||||||||||||||||
seq2  AAGCCTTGTACGCAGGTGCGAGAGTGAATTC  930