BAC Information

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BAC

Clone NameB6Ng01-217K22
Chromosome1 (Build37)
Map Location 64,786,105 - 64,787,154
singlet/doubletsinglet
Overlap genenone
Upstream geneFastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1, LOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5
Downstream gene9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217K22.bB6Ng01-217K22.g
ACCGA034019GA034020
length1,1031,071
definitionB6Ng01-217K22.b B6Ng01-217K22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctttgtttagctctactccccatttttaaatagggttacttgat
tttctggagtccatcttcttgagttctttatatatattggatattagtcc
cctatctgatttaggattggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacagtgtcctttgccttacagaagctttgcaatttt
atgaggtcccatttgttaattcttgatcttacatcacaagccattggtgt
tctgttcaggaattttccccctgtacccatatctttgaggatcttcccca
ctttctcttctattagattcagtgtatctggttttatgtgaaggtccttg
atccacttgcacttgagctttgtacaagaagataagaatggattaatttg
cattcttctaaatgctaactgccagttgtaccagcaccatttgttgaaaa
ttctgtcttttttccactggatggttttagctcctttgtcaaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccatcg
gtctacttatctgtcgctataccagtaccatgacgtttttatcacaatta
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttattgttgagaatagttttcgctattctgggtttttttgttattccaga
tgagcttggaaattgctctttctaaatctatgaaattttgatggggattg
cattaaagaggtagatagctttttggcaagatggccagttttactatatt
aatcctgcccattctggtacaagtcacaaaccgcatgaaactcttagaat
aagaaagaccatagttgtggatatttctatccatcttagaagggggaaac
aaaacacccatggaaggagtttacagagactatgtgtggagtagtagact
tgagaaatgaccatctagagaactggactccacctggggaatccattcca
atttactatcaccaaatccagacactggttgtagatgccaacaagtgcct
tgcttgagaagaaccttgataataagctcttcctcctgaagagacttcct
gca
gaattcacccaggaaccttgggttgttccacttggttctgcctagaccat
tactgtcttactgctctgtcaaccttccttaacaacaaaaatctgacttt
tgcttagagatcccaagtagttacagtagtaatggaagggaacgttggct
gggtgtggtggctcagacctctaaatccaacactctatagggggacagca
ggaagattctgagtttgaagacaacctgggctacactgacagtctgtgtt
tcaaaacaaaatccaaaaaaggtgacaaagtaaacgtgtatctttttttg
tgtgtgtgttgttttagtttttgctttcccacatatattacttaaaggtt
attttaagatatgctgattggggctggagctcagcagttaaagagcattg
tgtgctctttcagaggacctgggttcagttcccagtacccacacagtggc
tcacaaccatctgtacaatcccaggagagctggtccttcctctcttatac
ccttcatggctgccatgcatagacctggtacacatgcatgcatgcaagca
aaacattcatacacctaaagataaatctaaaaacagaatagtttttttaa
aagtatgctgagtacttaacatacctcaggcaggctgctaaatattttgc
ctcgtttaatgcttggaataatcatatacagaaactgtcaccagaacaac
tcattgggtttatttgggtgtaactagtccacaaaaagggtagcagtcga
tatttcttatacttcattattattacagttaataacaaatgcggtacaat
tgtaaatttactaagagtagacttttaagtgtttcttatcacaacacaca
caaagataagtatggtggtgctagaaatgcaactcattttagttacctat
cgaacacaaagacccaggttcaattcccaataccacctaaaacttaggca
tttgtcttcatgcctataatcccaaggaattaagaaggtgggccctggaa
aggtcaagaagttcaaagtcatccatcatcgacttgccgaatcaagtggg
aggacagagccttgggttaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64786105_64787154
seq2: B6Ng01-217K22.g_68_1138

seq1  GAATTCACCCAGGAACCTTGGGTTGTTCCACTTGGTTCTGCCTAGACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCAGGAACCTTGGGTTGTTCCACTTGGTTCTGCCTAGACCAT  50

seq1  TACTGTCTTACTGCTCTGTCAACCTTCCTTAACAACAAAAATCTGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTTACTGCTCTGTCAACCTTCCTTAACAACAAAAATCTGACTTT  100

seq1  TGCTTAGAGATCCCAAGTAGTTACAGTAGTAATGGAAGGGAACGTTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGAGATCCCAAGTAGTTACAGTAGTAATGGAAGGGAACGTTGGCT  150

seq1  GGGTGTGGTGGCTCAGACCTCTAAATCCAACACTCTATAGGGGGACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGTGGCTCAGACCTCTAAATCCAACACTCTATAGGGGGACAGCA  200

seq1  GGAAGATTCTGAGTTTGAAGACAACCTGGGCTACACTGACAGTCTGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTCTGAGTTTGAAGACAACCTGGGCTACACTGACAGTCTGTGTT  250

seq1  TCAAAACAAAATCCAAAAAAGGTGACAAAGTAAACGTGTATCTTTTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACAAAATCCAAAAAAGGTGACAAAGTAAACGTGTATCTTTTTTTG  300

seq1  TGTGTGTGTTGTTTTAGTTTTTGCTTTCCCACATATATTACTTAAAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTGTTTTAGTTTTTGCTTTCCCACATATATTACTTAAAGGTT  350

seq1  ATTTTAAGATATGCTGATTGGGGCTGGAGCTCAGCAGTTAAAGAGCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGATATGCTGATTGGGGCTGGAGCTCAGCAGTTAAAGAGCATTG  400

seq1  TGTGCTCTTTCAGAGGACCTGGGTTCAGTTCCCAGTACCCACACAGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTTTCAGAGGACCTGGGTTCAGTTCCCAGTACCCACACAGTGGC  450

seq1  TCACAACCATCTGTACAATCCCAGGAGAGCTGGTCCTTCCTCTCTTATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATCTGTACAATCCCAGGAGAGCTGGTCCTTCCTCTCTTATAC  500

seq1  CCTTCATGGCTGCCATGCATAGACCTGGTACACATGCATGCATGCAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATGGCTGCCATGCATAGACCTGGTACACATGCATGCATGCAAGCA  550

seq1  AAACATTCATACACCTAAAGATAAATCTAAAAACAGAATAGTTTTTTT-A  599
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAACATTCATACACCTAAAGATAAATCTAAAAACAGAATAGTTTTTTTAA  600

seq1  AAGTATGCTGAGTACTTAACATACCTCAGGCAGGCTGCTAAATATTTTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGCTGAGTACTTAACATACCTCAGGCAGGCTGCTAAATATTTTGC  650

seq1  CTCGTTTAATGCTTGGAATAATCATATACAGAAACTGTCACCAGAACAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTTAATGCTTGGAATAATCATATACAGAAACTGTCACCAGAACAAC  700

seq1  TCATTGGGTTTA-TTGGGTGTAACTAGTCCACAAAAAGGGTAGCAGTCGA  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCATTGGGTTTATTTGGGTGTAACTAGTCCACAAAAAGGGTAGCAGTCGA  750

seq1  TATTTCTTATACTTCATTATTATTACAGTTAATAAC-AATGCGGTACAAT  797
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTTCTTATACTTCATTATTATTACAGTTAATAACAAATGCGGTACAAT  800

seq1  TGTAAA-TTACTAAGAGTAGAC-TTTAAGTG-TTCTTATCACAACACACA  844
      |||||| ||||||||||||||| |||||||| ||||||||||||||||||
seq2  TGTAAATTTACTAAGAGTAGACTTTTAAGTGTTTCTTATCACAACACACA  850

seq1  CAAAGATAAGTAT-GTGG-GCTAGAAATGCAACTCA-TTTAGTTACCTAT  891
      ||||||||||||| |||| ||||||||||||||||| |||||||||||||
seq2  CAAAGATAAGTATGGTGGTGCTAGAAATGCAACTCATTTTAGTTACCTAT  900

seq1  CGAACACAAAGACCCAGGTTCAATTCCCAATACCACCTAAAAC-TAGGCA  940
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CGAACACAAAGACCCAGGTTCAATTCCCAATACCACCTAAAACTTAGGCA  950

seq1  -TTGTCCTCATGCCTATAATCCC-AGGATTTAAG-AGGTGGGGCCTGG-A  986
       ||||| |||||||||||||||| |||| ||||| ||||||| ||||| |
seq2  TTTGTCTTCATGCCTATAATCCCAAGGAATTAAGAAGGTGGGCCCTGGAA  1000

seq1  AGGTC-AGAAGTTCAAAGTCATCCATCATCGAC-TGC--GATCAAGTTGG  1032
      ||||| ||||||||||||||||||||||||||| |||   ||||||| ||
seq2  AGGTCAAGAAGTTCAAAGTCATCCATCATCGACTTGCCGAATCAAGTGGG  1050

seq1  AGGCCAG---CCTGGGTTACA  1050
      ||| |||   | |||||||||
seq2  AGGACAGAGCCTTGGGTTACA  1071