BAC Information

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BAC

Clone NameB6Ng01-218K04
Chromosome1 (Build37)
Map Location 176,212,811 - 176,400,672
singlet/doubletdoublet
Overlap gene1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220
Upstream geneDarc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419
Downstream geneFmn2, Grem2, Rgs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K04.bB6Ng01-218K04.g
ACCGA034709GA034710
length589942
definitionB6Ng01-218K04.b B6Ng01-218K04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(176,400,078 - 176,400,672)(176,212,811 - 176,213,391)
sequence
attgaggtccttctggatttttattcagtaactcatggtgtctgggaggt
tctttttccagccattcagggtgatttctccatttaaattctttagtcgc
ttcttgagcaatccagctttttcaccagtcaactggtccatagtagttgg
tttttctcttcctcctcctgcgcatggatgtgcagctaatgtcctcattg
ctgccaatttggggttggaggtggaggaggggatggggcaggagacccat
atataacattgagctagaagacccgtggtgttggcttcaaccatttctga
cttccactaaaatgcctttaagagacctttaaaagtgtccactaaaaaga
atgaatgtaccttttactgacagctgtaggctctgcatatgtaatctcct
tacagtctcatatggaacaggtgaatttgccttctccctcttaatataga
aagtggatcctcaatgcttcgtttgcaaataagcatcacgtatttaaaca
gtgcctagaaagtcagactatgtcaccaaaacatcagtgactgtagctgt
tttccaccctgtactctcttccacctagccaggctttga
gaattccattgcactgaaagaagggcctctcagttattatgggaggcttt
ttaacaacaaggctcactaaaaaatggaagggagttcaacatccttaatc
atcagggaaatgcaaatcaaaacaaccctgagattccacctcacaccagt
cagaatggctaagatcaaaaattcaggtgacagcagatgctggcgtggat
gtggagaaagaggaacactcctccattgttggtgggattgcaggcttgta
caaccactctggaaatcagtctggcggttcctcagaaaattggacatagt
actaccggaggatccagcaatacctctccttggcatttatccagaagatg
ccccaactggtaagaaggacacatgctccactatgttcagagcagcctta
tttataatagccagaagctggaaagaacccagatgcccctcaacagagga
atggatacagaaaatgtggtacatctacacaatggagtactactcagcta
ttaaaaagaatgaatttatgaaattcctagccaaatggatggacctggag
ggcatcatcctgagtgaggtaacacattcacaaaggaactcacacaatat
gtactcactgataagtggatattagccccaaacctaggattcccaagata
taaggtacaatttgctaaacacatgaaactcaagaagaatgaagactgaa
gtgtggacactatgcccctccttagaattgggaacaaaacacccatggaa
ggagttacagagacaaagtttggagctgagatgaaaggatggaccatgta
gagactgccatatccagggatgcaccccataatcagcaaccaaacgctga
caccattgcatacactagcaagattttattgaaaggacccagatgtagct
gtctcttgtgagactatgccggggcctagcaaacacagaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176400078_176400672
seq2: B6Ng01-218K04.b_47_641 (reverse)

seq1  TCAAAGCCTGGCTAGGTGGAAGAGAGTACAGGGTGGAAAACAGCTACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCCTGGCTAGGTGGAAGAGAGTACAGGGTGGAAAACAGCTACAGT  50

seq1  CACTGATGTTTTGGTGACATAGTCTGACTTTCTAGGCACTGTTTAAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGTTTTGGTGACATAGTCTGACTTTCTAGGCACTGTTTAAATAC  100

seq1  GTGATGCTTATTTGCAAACGAAGCATTGAGGATCCACTTTCTATATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCTTATTTGCAAACGAAGCATTGAGGATCCACTTTCTATATTAAG  150

seq1  AGGGAGAAGGCAAATTCACCTGTTCCATATGAGACTGTAAGGAGATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAAGGCAAATTCACCTGTTCCATATGAGACTGTAAGGAGATTACA  200

seq1  TATGCAGAGCCTACAGCTGTCAGTAAAAGGTACATTCATTCTTTTTAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGAGCCTACAGCTGTCAGTAAAAGGTACATTCATTCTTTTTAGTG  250

seq1  GACACTTTTAAAGGTCTCTTAAAGGCATTTTAGTGGAAGTCAGAAATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTTAAAGGTCTCTTAAAGGCATTTTAGTGGAAGTCAGAAATGGT  300

seq1  TGAAGCCAACACCACGGGTCTTCTAGCTCAATGTTATATATGGGTCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAACACCACGGGTCTTCTAGCTCAATGTTATATATGGGTCTCCT  350

seq1  GCCCCATCCCCTCCTCCACCTCCAACCCCAAATTGGCAGCAATGAGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATCCCCTCCTCCACCTCCAACCCCAAATTGGCAGCAATGAGGACA  400

seq1  TTAGCTGCACATCCATGCGCAGGAGGAGGAAGAGAAAAACCAACTACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCACATCCATGCGCAGGAGGAGGAAGAGAAAAACCAACTACTAT  450

seq1  GGACCAGTTGACTGGTGAAAAAGCTGGATTGCTCAAGAAGCGACTAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGTTGACTGGTGAAAAAGCTGGATTGCTCAAGAAGCGACTAAAGA  500

seq1  ATTTAAATGGAGAAATCACCCTGAATGGCTGGAAAAAGAACCTCCCAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATGGAGAAATCACCCTGAATGGCTGGAAAAAGAACCTCCCAGAC  550

seq1  ACCATGAGTTACTGAATAAAAATCCAGAAGGACCTCAATGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGTTACTGAATAAAAATCCAGAAGGACCTCAATGAATTC  595

seq1: chr1_176212811_176213391
seq2: B6Ng01-218K04.g_66_646

seq1  GAATTCCATTGCACTGAAAGAAGGGCCTCTCAGTTATTATGGGAGGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCACTGAAAGAAGGGCCTCTCAGTTATTATGGGAGGCTTT  50

seq1  TTAACAACAAGGCTCACTAAAAAATGGAAGGGAGTTCAACATCCTTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACAAGGCTCACTAAAAAATGGAAGGGAGTTCAACATCCTTAATC  100

seq1  ATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGT  150

seq1  CAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGAT  200

seq1  GTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTA  250

seq1  CAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGT  300

seq1  ACTACCGGAGGATCCAGCAATACCTCTCCTTGGCATTTATCCAGAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCGGAGGATCCAGCAATACCTCTCCTTGGCATTTATCCAGAAGATG  350

seq1  CCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCAGAGCAGCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCAGAGCAGCCTTA  400

seq1  TTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGA  450

seq1  ATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTA  500

seq1  TTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAG  550

seq1  GGCATCATCCTGAGTGAGGTAACACATTCAC  581
      |||||||||||||||||||||||||||||||
seq2  GGCATCATCCTGAGTGAGGTAACACATTCAC  581