BAC Information

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BAC

Clone NameB6Ng01-219E08
Chromosome1 (Build37)
Map Location 63,208,601 - 63,209,799
singlet/doubletsinglet
Overlap geneNdufs1
Upstream genePard3b, LOC667592, Nrp2, LOC100043070, A430093A21Rik
Downstream geneEef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219E08.bB6Ng01-219E08.g
ACCGA035162GA035163
length1,0211,204
definitionB6Ng01-219E08.b B6Ng01-219E08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcagtcctcctctgctagctaagactgacagtagaagaggc
cgtcacagtgactcactaatagtaatatttctatgagtctctgaagtact
aggagcctcgtaatggatagctgtccagcagaagtccctcagaaactgga
gaagatacaactggccttgagctcaggcagaactggccagcacccatatg
cagcatgagaaggagggaaagagtcctattttaatatttttcctttagcc
tacctttactgtctacctagagatttccacatgatgaactgaaacaagaa
gagaaaacctgaactccatttataaatgatttagctctgtgtgtcaaagc
aagaaataaatggtgactgtaccacagctccaatcagaggtggctttgag
cattagcggcatcgggagcgtccaccaaccaatacaggtaggcattggtt
ttgtaggaaaaaaatggtcaagatgaccatgatggttgatcatctaggaa
acatacaacttgcccaagcaaatgaatgagggcttttctagaggtttaac
tgaagagggaagatgcattttgaatgtgcagagaggatcttgtataagca
acacctttcaataaaaaaagcttatggcctatccagggatccaccccata
atcagcttccaaacgctgacaccattgcatacactagcaagattttatcg
aaaggacacagatgtagctgtctcttgtgagactatgccggggcctagca
aacacagaagtggattcacacagtcagctattggatggatcacagggccc
ccaatggaggagctagagaaagtagccaaggagctaaagggatctgcacc
ctataggtggaacaacattatgaactaaccagtacccgggagctcttgac
tctagctgcatatgtatcaaaagattggcctagtcggccatcactgggaa
agagaggcccattggacacgctaactgttattatgccccagtacagggaa
cgccagggccaaaaaagtggg
gaattcagattctgagcacccaagtaaaagtcaggagtacatggcagtct
agcactctagaggcaagaaaggggcggagagtggagtatgcagggttagg
taaggggacctactctggctggtcagagttggagatagcaattggcaagc
ttcaggctcagcaggaatgtagcctgagtcactgaatgaagggagagtta
ggaagacatctgatgtcaacatccggtgcttgcataaacacacctgacta
ctctaaaaatccgtaatgttgagtatgagtggcacacaatgtaatcccaa
cacttgggaggcagaggcagacggatttctgtaagttcaaggccaccctg
gtccacagtgtccaagttccaagacactgcctcaagaaaacaaaaaatct
gttatggtttgtcttgatgctgctcctctctctctcctcattaaagacta
aagactactcaagtacatatgcacatacttaaaatcttagaaagaatata
atttgctgaggcttgtcctacctttcaacttaagtagttattttccatta
aaacattttatggggctgggtcaaatcattcagtcagtacatacagacta
cacgagcataaggacctggtacccagaatctagtaagagctgagtgtgtc
agtgatgcctgcaaccttagcatcacagagtcggggactgggggatcact
agggctccctggctacccaaatcagtgagttccaggttccataagagact
ctgtctcaaaaaaataaggtgaaaagaaattaaagccacctaacacatat
ctggcctccaaacacacaaccctcctctaacacatacacacacacacaca
tacacacaatgcaaacataaaaatgtagataaaaccaactaaaatttagg
aagaaaatgacccagaaaattttattaaaaaaaaaaaagaagtgaactaa
aatgtaaaaaacaagggccaggagggtggcttagaggggaaaaagccctt
gcctgagcaaggctgatgacctaagattgatctctgaaagtcctatcaag
aaccagaatgaagttgcaaatttctaaatcccagccacgactacagtggt
gatgcaagccaggatgagaacaagccagagcctgtggctggcccagggtg
gccattacactatgagatccgagctgtccttaacaaggttaaaaggttaa
aacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63208601_63209799
seq2: B6Ng01-219E08.g_67_1270

seq1  GAATTCAGATTCTGAGCACCCAAGTAAAAGTCAGGAGTACATGGCAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATTCTGAGCACCCAAGTAAAAGTCAGGAGTACATGGCAGTCT  50

seq1  AGCACTCTAGAGGCAAGAAAGGGGCGGAGAGTGGAGTATGCAGGGTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTAGAGGCAAGAAAGGGGCGGAGAGTGGAGTATGCAGGGTTAGG  100

seq1  TAAGGGGACCTACTCTGGCTGGTCAGAGTTGGAGATAGCAATTGGCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGGACCTACTCTGGCTGGTCAGAGTTGGAGATAGCAATTGGCAAGC  150

seq1  TTCAGGCTCAGCAGGAATGTAGCCTGAGTCACTGAATGAAGGGAGAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCTCAGCAGGAATGTAGCCTGAGTCACTGAATGAAGGGAGAGTTA  200

seq1  GGAAGACATCTGATGTCAACATCCGGTGCTTGCATAAACACACCTGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACATCTGATGTCAACATCCGGTGCTTGCATAAACACACCTGACTA  250

seq1  CTCTAAAAATCCGTAATGTTGAGTATGAGTGGCACACAATGTAATCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAAATCCGTAATGTTGAGTATGAGTGGCACACAATGTAATCCCAA  300

seq1  CACTTGGGAGGCAGAGGCAGACGGATTTCTGTAAGTTCAAGGCCACCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGGAGGCAGAGGCAGACGGATTTCTGTAAGTTCAAGGCCACCCTG  350

seq1  GTCCACAGTGTCCAAGTTCCAAGACACTGCCTCAAGAAAACAAAAAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGTGTCCAAGTTCCAAGACACTGCCTCAAGAAAACAAAAAATCT  400

seq1  GTTATGGTTTGTCTTGATGCTGCTCCTCTCTCTCTCCTCATTAAAGACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGTTTGTCTTGATGCTGCTCCTCTCTCTCTCCTCATTAAAGACTA  450

seq1  AAGACTACTCAAGTACATATGCACATACTTAAAATCTTAGAAAGAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACTCAAGTACATATGCACATACTTAAAATCTTAGAAAGAATATA  500

seq1  ATTTGCTGAGGCTTGTCCTACCTTTCAACTTAAGTAGTTATTTTCCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGAGGCTTGTCCTACCTTTCAACTTAAGTAGTTATTTTCCATTA  550

seq1  AAACATTTTATGGGGCTGGGTCAAATCATTCAGTCAGTACATACAGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTATGGGGCTGGGTCAAATCATTCAGTCAGTACATACAGACTA  600

seq1  CACGAGCATAAGGACCTGGTACCCAGAATCTAGTAAGAGCTGAGTGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGCATAAGGACCTGGTACCCAGAATCTAGTAAGAGCTGAGTGTGTC  650

seq1  AGTGATGCCTGCAACCTTAGCATCACAGAGTCGGGGACTGGGGGATCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCCTGCAACCTTAGCATCACAGAGTCGGGGACTGGGGGATCACT  700

seq1  AGGGCTCCCTGGCTACCCAAATCAGTGAGTTCCAGGTTCCATAAGAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCCCTGGCTACCCAAATCAGTGAGTTCCAGGTTCCATAAGAGACT  750

seq1  CTGTCTCAAAAAAATAAGGTGAAAAGAAATTAAAGCCACCTAACACATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAAAAAAATAAGGTGAAAAGAAATTAAAGCCACCTAACACATAT  800

seq1  CTGGCCTCCAAACACACAACCCTCCTCTAACACATACACACACACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCCAAACACACAACCCTCCTCTAACACATACACACACACACACA  850

seq1  TACACACAATGCAAACATAAAAATGTAGATAAAACCAACTAAAATTTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAATGCAAACATAAAAATGTAGATAAAACCAACTAAAATTTAGG  900

seq1  AAGAAAATGACCCAG-AAATTTTATTAAAAAAAAAAAAGAAGTGAACTAA  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGACCCAGAAAATTTTATTAAAAAAAAAAAAGAAGTGAACTAA  950

seq1  AATGTAAAAA--CAGGGCCAGGAGGGTGGCTTAGAGGGG-AAAAGCCCTT  996
      ||||||||||   |||||||||||||||||||||||||| ||||||||||
seq2  AATGTAAAAAACAAGGGCCAGGAGGGTGGCTTAGAGGGGAAAAAGCCCTT  1000

seq1  G-CTGAGCAAGGCTGATGACCTAAGATTGATCTCTGAAAGTCCTATCAAG  1045
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGCAAGGCTGATGACCTAAGATTGATCTCTGAAAGTCCTATCAAG  1050

seq1  AACCAG-ATGAAG-TGCAAATTTCT-AATCCCAG-CACGACTACAGT-GT  1090
      |||||| |||||| ||||||||||| |||||||| |||||||||||| ||
seq2  AACCAGAATGAAGTTGCAAATTTCTAAATCCCAGCCACGACTACAGTGGT  1100

seq1  GATGGCAGGCAGAATGAG-ACAGGCCAAGAGCTTGTGGGCTGG-CCAGTT  1138
      ||||  || ||| ||||| ||| ||| ||||| ||| |||||| ||||  
seq2  GATGCAAGCCAGGATGAGAACAAGCC-AGAGCCTGT-GGCTGGCCCAGGG  1148

seq1  TGGCACATACACATAATGAAGAAATCAGAGCCCTGCCTTAACAAGG-TAA  1187
      ||||   |||||      | || ||| ||||  | ||||||||||| |||
seq2  TGGCCATTACAC-----TATGAGATCCGAGCTGT-CCTTAACAAGGTTAA  1192

seq1  AAGGTAAAAACC  1199
      ||||| ||||||
seq2  AAGGTTAAAACC  1204