BAC Information

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BAC

Clone NameB6Ng01-219H02
Chromosome1 (Build37)
Map Location 108,041,712 - 108,244,217
singlet/doubletdoublet
Overlap genePhlpp
Upstream geneRnf152, LOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634
Downstream geneLOC626075, Bcl2, LOC100042085, Fvt1, Vps4b, Serpinb5, LOC671141, Serpinb12, Serpinb13, LOC666394, Serpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219H02.bB6Ng01-219H02.g
ACCGA035279GA035280
length4071,149
definitionB6Ng01-219H02.b B6Ng01-219H02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,041,712 - 108,042,124)(108,243,044 - 108,244,217)
sequence
tgccaataaccacgcccacccccccaccccccccccatgttcagaaggga
accacatgctccagaaggcaatgcattctgggaaactcccaagttacaga
gaccttgagcagaaggatccactgaacctcatctgctaaaccacttcctg
actcagagaaggaatcaggccaccagtgcctcttgtttaaagttactgag
gtaatttattatgtagtaaagaacaggtatgtctccagtgcaaagggaag
gaacccttacctgcactgcagtaaggagaggaagccagaaaagtacacta
tgtcctagaaagccaacctctgtagcctgagaagatgctgttggagagtg
gactgccacttgccctgtcttctgccagatgccagaggtgtgtgtttggg
ggggggg
gaattcaaagagaaaaagataatgtagctttcagtttcaaggtttagtga
tctaacaatatctacttgcctaatatctcaccaccaacaaaattatatcc
ttaggaaaacaaaaattgtctagggtaaggtagacatgctgtcaagagac
agaagtagagattctgaaagaattaagatcccagaggtaaaccatttata
ttgcttgctaagtgtcttaacatttattgtggtttatttattattttcca
atcaacaccactgcctggtacagatttgcaatgtcaacctgaaaagtctc
catcctatgatgatacatgaataaaaagcaacgaatacattttaaaattc
agagtctcttcgagttcaaaacaatatgctaataagataaaaactgaatc
agcatagtattaccgatcatctataattttgtatcctttcatttgatctg
aattgcttaccgggcaggaagttcacatatttgattatggccaatatcca
aaacttctaatttccggctttcacatacccactcaggcacactttctagg
cagtttctaaagataagaacataaacattaatattttaaaaattaaatct
ggccttaaatatgtagtttaattttttctttaatgtatatgtgtctgtgt
ctatgtacacattcatgcaggtacacactggggccagaagagggcagagg
atgccctggagctggagctgcaggcaggagtgagccactggtgtaggtgc
tgggagcgaactacagttctctgcaagaactcttcactatatactcttca
ctaggcgccagctctccagcccctcaaatgtactacttcttcttcttctt
tttctattagatattttctttatttacatttcagatgtacttctaagctc
caaacaactacagaaaaataaaacttttagagaaatgccaaactacaatg
agccagttcaaggatatatgcatttattgtatttttaaaccagatgaatt
attataatagaaaaaataaagctacacagatatggcaatcttcatcatct
ttacatctaaaactctactctcagatgttaacgttcttttggaacactgc
gactcggaaaggactacattggatacatgcatcagttaacaagcgatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108041712_108042124
seq2: B6Ng01-219H02.b_44_456

seq1  GAATTCTGCCAATAACCACGCCCACCCCCCCACCCCCCCCCCATGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCAATAACCACGCCCACCCCCCCACCCCCCCCCCATGTTCAG  50

seq1  AAGGGAACCACATGCTCCAGAAGGCAATGCATTCTGGGAAACTCCCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACCACATGCTCCAGAAGGCAATGCATTCTGGGAAACTCCCAAGT  100

seq1  TACAGAGACCTTGAGCAGAAGGATCCACTGAACCTCATCTGCTAAACCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGACCTTGAGCAGAAGGATCCACTGAACCTCATCTGCTAAACCAC  150

seq1  TTCCTGACTCAGAGAAGGAATCAGGCCACCAGTGCCTCTTGTTTAAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACTCAGAGAAGGAATCAGGCCACCAGTGCCTCTTGTTTAAAGTT  200

seq1  ACTGAGGTAATTTATTATGTAGTAAAGAACAGGTATGTCTCCAGTGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTAATTTATTATGTAGTAAAGAACAGGTATGTCTCCAGTGCAAA  250

seq1  GGGAAGGAACCCTTACCTGCACTGCAGTAAGGAGAGGAAGCCAGAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGAACCCTTACCTGCACTGCAGTAAGGAGAGGAAGCCAGAAAAGT  300

seq1  ACACTATGTCCTAGAAAGCCAACCTCTGTAGCCTGAGAAGATGCTGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATGTCCTAGAAAGCCAACCTCTGTAGCCTGAGAAGATGCTGTTGG  350

seq1  AGAGTGGACTGCCACTTGCCCTGTCTTCTGCCAGATGCCAGAGGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGACTGCCACTTGCCCTGTCTTCTGCCAGATGCCAGAGGTGTGTG  400

seq1  TTTGGGGGGGGGG  413
      |||||||||||||
seq2  TTTGGGGGGGGGG  413

seq1: chr1_108243044_108244217
seq2: B6Ng01-219H02.g_66_1214 (reverse)

seq1  TGATCGCTTTTGTTAACTGGATCACTGTGTATTTTCCCAATGGTAGTCCC  50
      |||||||  ||||||||||   ||   |||||    ||||| |||||  |
seq2  TGATCGC--TTGTTAACTGATGCA---TGTAT----CCAAT-GTAGT--C  38

seq1  CTTTCTGAGTCTGCAGTGGTCTCAAAAG-ACGTTTTAACATCTGAGAGGT  99
      ||||| ||||| |||||| || |||||| |||  ||||||||||||| ||
seq2  CTTTCCGAGTC-GCAGTGTTC-CAAAAGAACG--TTAACATCTGAGA-GT  83

seq1  AGAAGGTTTTTAGATGTTAAAGATGATGAAGA-TGGCATATCTGTGTTAG  148
      |||    ||||||||| ||||||||||||||| || |||||||||| |||
seq2  AGA---GTTTTAGATG-TAAAGATGATGAAGATTGCCATATCTGTG-TAG  128

seq1  CTTTTATTTTTTTTCTATTATAATAATTCATCTTGGTTTTAAAATACAAT  198
      |||   | |||||||||||||||||||||||| |||||| ||||||||||
seq2  CTT---TATTTTTTCTATTATAATAATTCATC-TGGTTTAAAAATACAAT  174

seq1  AAATGCATATATCCTTTGACCTGGCTCATTGTAGTTTGGCATTTCTCTTA  248
      |||||||||||||| |||| |||||||||||||||||||||||||||| |
seq2  AAATGCATATATCC-TTGAACTGGCTCATTGTAGTTTGGCATTTCTCTAA  223

seq1  AAGTTTTATTTTTCTGTAGTTGTTTGGAGCTTAGAAGTACATCTGAAATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTATTTTTCTGTAGTTGTTTGGAGCTTAGAAGTACATCTGAAATG  273

seq1  TAAATAAAGAAAATATCTAATAGAAAAAGAAGAAGAAGAAGTAGTACATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAGAAAATATCTAATAGAAAAAGAAGAAGAAGAAGTAGTACATT  323

seq1  TGAGGGGCTGGAGAGCTGGCGCCTAGTGAAGAGTATATAGTGAAGAGTTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCTGGAGAGCTGGCGCCTAGTGAAGAGTATATAGTGAAGAGTTC  373

seq1  TTGCAGAGAACTGTAGTTCGCTCCCAGCACCTACACCAGTGGCTCACTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGAACTGTAGTTCGCTCCCAGCACCTACACCAGTGGCTCACTCC  423

seq1  TGCCTGCAGCTCCAGCTCCAGGGCATCCTCTGCCCTCTTCTGGCCCCAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCAGCTCCAGCTCCAGGGCATCCTCTGCCCTCTTCTGGCCCCAGT  473

seq1  GTGTACCTGCATGAATGTGTACATAGACACAGACACATATACATTAAAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTGCATGAATGTGTACATAGACACAGACACATATACATTAAAGA  523

seq1  AAAAATTAAACTACATATTTAAGGCCAGATTTAATTTTTAAAATATTAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAACTACATATTTAAGGCCAGATTTAATTTTTAAAATATTAAT  573

seq1  GTTTATGTTCTTATCTTTAGAAACTGCCTAGAAAGTGTGCCTGAGTGGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTTCTTATCTTTAGAAACTGCCTAGAAAGTGTGCCTGAGTGGGT  623

seq1  ATGTGAAAGCCGGAAATTAGAAGTTTTGGATATTGGCCATAATCAAATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAAGCCGGAAATTAGAAGTTTTGGATATTGGCCATAATCAAATAT  673

seq1  GTGAACTTCCTGCCCGGTAAGCAATTCAGATCAAATGAAAGGATACAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTTCCTGCCCGGTAAGCAATTCAGATCAAATGAAAGGATACAAAA  723

seq1  TTATAGATGATCGGTAATACTATGCTGATTCAGTTTTTATCTTATTAGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGATGATCGGTAATACTATGCTGATTCAGTTTTTATCTTATTAGCA  773

seq1  TATTGTTTTGAACTCGAAGAGACTCTGAATTTTAAAATGTATTCGTTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTGAACTCGAAGAGACTCTGAATTTTAAAATGTATTCGTTGCT  823

seq1  TTTTATTCATGTATCATCATAGGATGGAGACTTTTCAGGTTGACATTGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCATGTATCATCATAGGATGGAGACTTTTCAGGTTGACATTGCA  873

seq1  AATCTGTACCAGGCAGTGGTGTTGATTGGAAAATAATAAATAAACCACAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTACCAGGCAGTGGTGTTGATTGGAAAATAATAAATAAACCACAA  923

seq1  TAAATGTTAAGACACTTAGCAAGCAATATAAATGGTTTACCTCTGGGATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTAAGACACTTAGCAAGCAATATAAATGGTTTACCTCTGGGATC  973

seq1  TTAATTCTTTCAGAATCTCTACTTCTGTCTCTTGACAGCATGTCTACCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTTTCAGAATCTCTACTTCTGTCTCTTGACAGCATGTCTACCTT  1023

seq1  ACCCTAGACAATTTTTGTTTTCCTAAGGATATAATTTTGTTGGTGGTGAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGACAATTTTTGTTTTCCTAAGGATATAATTTTGTTGGTGGTGAG  1073

seq1  ATATTAGGCAAGTAGATATTGTTAGATCACTAAACCTTGAAACTGAAAGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGGCAAGTAGATATTGTTAGATCACTAAACCTTGAAACTGAAAGC  1123

seq1  TACATTATCTTTTTCTCTTTGAATTC  1174
      ||||||||||||||||||||||||||
seq2  TACATTATCTTTTTCTCTTTGAATTC  1149