BAC Information

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BAC

Clone NameB6Ng01-219P22
Chromosome1 (Build37)
Map Location 58,679,755 - 58,680,692
singlet/doubletsinglet
Overlap genenone
Upstream gene2810022L02Rik, Kctd18, Sgol2, Aox1, Aox3, Aox4, Aox3l1, EG628262, Bzw1, Clk1, Ppil3, Nif3l1, Orc2l, BC049806, Ndufb3
Downstream geneEG667397, Als2cr12, Cflar, LOC100042431, Casp8, EG667419, Trak2, Als2cr2, 4930408G06Rik, EG667447, Als2cr11, Als2cr4, Mpp4, Als2, Als2cr7, Fzd7, Gm973
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219P22.b
ACCGA035670
length940
definitionB6Ng01-219P22.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcggaagtttttttttaaagttctcgaggtggagtccaggct
ttgatagtttttaaaactcccctgtaacttcagaaagttgaagacacata
cactaaacaatgatgtcaatgatatttgataatattctttgttgctttcc
ttttgatttttataaaaatgattttttttttcgagacaggtttctctgtg
tagccctggcattcttggaactcactctgtagaccaggctggcctcaaac
tcagaaatctgcctgtctctgcctcccaagtgctgggattaaaggcgtgc
gccaccacgcccagcttaaaaatgatttttaatgccacagttactgtgcc
gtgctcctttggatcctgaagctgccttagagaagtttagagccctgcct
gtgagcctttagaagtttggaggaaactccctgacatcacatatttgatt
gaccctgaaaggttgtcctgtaacatgaagagcacatttaaataaaacaa
ggttctaaatcaagtatatttagaaagaaagaaagaaagaaagaaagaga
gagagagagagagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaaatgaaaaagaataaaaatctggtt
gacaaatgggaatggacagaaccagcatttaaaaggcaaacaaagagaaa
tttgaaagaaaaattcaggagatagggaggatgtgtctggagagagtatg
ctggctctctgcggcaggtctaggcttgagaggagagaaccaggtccagt
ctctctggggcgtaatcttgctgtcctccatagaataagtgccctgagct
gggagtttgtccaagcaggagcctcttaactgtgcaatcttttggttata
agggctgaatgaggaggtgggttttttttttttttactga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_58679755_58680692
seq2: B6Ng01-219P22.b_45_984

seq1  GAATTCCTGCGGAAGTTTTTTTTTAAAGTTCT-GAGGTGGAGTCCAGGCT  49
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCCTGCGGAAGTTTTTTTTTAAAGTTCTCGAGGTGGAGTCCAGGCT  50

seq1  TTGATAGTTTTTAAAACTCCCCTGTAACTTCAGAAAGTTGAAGACACATA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTTTTTAAAACTCCCCTGTAACTTCAGAAAGTTGAAGACACATA  100

seq1  CACTAAACAATGATGTCAATGATATTTGATAATATTCTTTGTTGCTTTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAACAATGATGTCAATGATATTTGATAATATTCTTTGTTGCTTTCC  150

seq1  TTTTGATTTTTATAAAAATGATTTTTTTTTTCGAGACAGGTTTCTCTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTTTATAAAAATGATTTTTTTTTTCGAGACAGGTTTCTCTGTG  200

seq1  TAGCCCTGGCATTCTTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCATTCTTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAAC  250

seq1  TCAGAAATCTGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCTGCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGC  300

seq1  GCCACCACGCCCAGCTTAAAAATGATTTTTAATGCCACAGTTACTGTGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACGCCCAGCTTAAAAATGATTTTTAATGCCACAGTTACTGTGCC  350

seq1  GTGCTCCTTTGGATCCTGAAGCTGCCTTAGAGAAGTTTAGAGCCCTGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCTTTGGATCCTGAAGCTGCCTTAGAGAAGTTTAGAGCCCTGCCT  400

seq1  GTGAGCCTTTAGAAGTTTGGAGGAAACTCCCTGACATCACATATTTGATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCTTTAGAAGTTTGGAGGAAACTCCCTGACATCACATATTTGATT  450

seq1  GACCCTGAAAGGTTGTCCTGTAACATGAAGAGCACATTTAAATAAAACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGAAAGGTTGTCCTGTAACATGAAGAGCACATTTAAATAAAACAA  500

seq1  GGTTCTAAATCAAGTATATTTAGAAAGAAAGAAAGAAAGAAAGAAAGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTAAATCAAGTATATTTAGAAAGAAAGAAAGAAAGAAAGAAAGAGA  550

seq1  GAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  600

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAATGAAAAAGAATAAAAATCTGGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAATGAAAAAGAATAAAAATCTGGTT  650

seq1  GACAAATGGGAATGGACAGAACCAGCATTTAAAAGGCAAACAAAGAGAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGGGAATGGACAGAACCAGCATTTAAAAGGCAAACAAAGAGAAA  700

seq1  TTTGAAAGAAAAATTCAGGAGATAGGGAGGATGTGTCTGGAGAGAGTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGAAAAATTCAGGAGATAGGGAGGATGTGTCTGGAGAGAGTATG  750

seq1  CTGGCTCTCTGCGGCAGGTCTAGGC-TGAGAGGAGAGAACCAGGTCCAGT  798
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGGCTCTCTGCGGCAGGTCTAGGCTTGAGAGGAGAGAACCAGGTCCAGT  800

seq1  CTCTCTGGGGCGT-AGCTTGCTGCCCTCCAGAGAATAAGTGCCCTGAGCT  847
      ||||||||||||| | ||||||| |||||| |||||||||||||||||||
seq2  CTCTCTGGGGCGTAATCTTGCTGTCCTCCATAGAATAAGTGCCCTGAGCT  850

seq1  GGGAGTTTGTCAAAGCAGGAGCTTCTTTAACTGTAGCAATCTTTT-GTTA  896
      ||||||||||| |||||||||| || |||||||| |||||||||| ||||
seq2  GGGAGTTTGTCCAAGCAGGAGCCTC-TTAACTGT-GCAATCTTTTGGTTA  898

seq1  TAAAGGGCTGAAAGAGGAGGTGGG-TTTTTTTTTTTTAACTGA  938
      | |||||||||| ||||||||||| |||||||||||| |||||
seq2  T-AAGGGCTGAATGAGGAGGTGGGTTTTTTTTTTTTTTACTGA  940