BAC Information

Click to search

BAC

Clone NameB6Ng01-220J07
Chromosome1 (Build37)
Map Location 81,115,066 - 81,115,609
singlet/doubletsinglet
Overlap gene9430031J16Rik
Upstream geneA830043J08Rik, 2310015K22Rik, Cul3, EG620899, 1700016L21Rik, Dock10, LOC665092
Downstream geneEG621020, LOC433328, EG665145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220J07.bB6Ng01-220J07.g
ACCGA036103GA036104
length1,0051,127
definitionB6Ng01-220J07.b B6Ng01-220J07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgggataaggaagtttgcatttcagctgtgagccccaagt
attctcattgccatagagtatgatcataatatagttgcattaggaagagc
tttcagttagaatttaacatagatatactgctcacaatgcttgaatgaac
ttacaggatttgaggcttcgcaccatgaagagagcctacaagaggctatt
ggttaagcctattttcaggggaagaccccagcatattggagatgccagta
caccaagaatagcagccaaagtagatgggatcaacctgagcttagagtac
cagagaaggcagaactggaaaagtgacaccagccctttggaggagtccag
aagatcatgtgtggatatcagacactgaaacaagaagctataacattgaa
gctgccttggaaagacctcaagttttttgagatgacagcatcataggaat
gcagttaacaaagagtgaatccagcccaggaaaagaagtttgttgcagtc
aacaaagatgaaaatggaattggagatctgaaaactgctttgacatcaga
catggagatacagagtttggaattcacccagctggtttcttgtcttgatt
caagaatacagttaaaggattggaagaatctcaaaagagtctttaaactt
tggacttttaacattgttgaaactgctatagactgtggggactttggaag
ttggacgaaatgtactttttaattatgctatggctatatatgttcctcat
agacttttgtgtttgaacaagtctatgggagccagagagtggcatttgat
ggtttgtatatgcttggcagatagagtggaactattagaacgtgtgacct
tcttggaattcatatgtcactgtgggtgtgggcttttaagaccatcatcc
tagctgcctgcaagtcagtcttccgctagcagccttcagatgaagatgta
gaactctcagctcctcctgcaccatgactgcctggatgctgcccagcttc
ccacc
gaattctttgttcagttctgagccccatttttaaacgtggttatttgatt
ttctgaagtccaccttcttgagctctcagtcagaatggctaagatcaaaa
attcaggtgacagcagatactggcgaggatgttgagaaagaggaacactc
ctccattgttggtgggagtgcaggcttgtacaaccactctggaaatcagt
ctggcggttcctcagaaaattggacatagtactaccggaggatcccgcaa
taactctcctgggcatatctccagaagatgccccaactggtaagaaggac
tcatgctccactatgttcatagcagccttatttataatagccagaagctg
gaaagaacccagatgcccctcaacagaggaatggatacagaaaatgtggt
acatctacacaatggagtactactcagctattaaaaagaatgaatttatg
aaattcctagccaaatggatggacctggagggcatcatcctgagtgaggt
aacacattcacaaagaaactcacacaatatgtactcactgataagtggat
attagccccaaacctaggatacccaagatataagatacaatttgctaaac
acatgaaactcaagaagaatgaagactgaagtgtggacactatgcccctc
cttagaattgggaacaaaacacccatggaaggagttacagagacaaagtt
tggagctgagatgaaaggatggaccatgtagagactgccatatccaggga
tccaccccataatcagcatccaaacactgacaccattgcatacactagca
agattttattgaaaggatccagatgtagctgcctcttgtgagactatgcc
ggggcatagcaaacacataagtggatgctcacagtcagctattggatgga
tcacaagggctcccaatggaggagctagagaaagtagccaaggagctaaa
gggatctgcaaccctataggtggaacaggagacaattattgactaaccca
gtaccccctgagcctctgactctagctgcatattgtatcaaagttggccc
tagtcagcatcactggaaaggaaggtccaattggtcatgcaacttgtata
atgtccaagttacaggggaatgtgccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81115066_81115609
seq2: B6Ng01-220J07.b_45_588 (reverse)

seq1  GTCAAAGCAGTTTTCAGATCTCCAATTCCATTTTCATCTTTGTTGACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGCAGTTTTCAGATCTCCAATTCCATTTTCATCTTTGTTGACTGC  50

seq1  AACAAACTTCTTTTCCTGGGCTGGATTCACTCTTTGTTAACTGCATTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTTCTTTTCCTGGGCTGGATTCACTCTTTGTTAACTGCATTCCT  100

seq1  ATGATGCTGTCATCTCAAAAAACTTGAGGTCTTTCCAAGGCAGCTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCTGTCATCTCAAAAAACTTGAGGTCTTTCCAAGGCAGCTTCAAT  150

seq1  GTTATAGCTTCTTGTTTCAGTGTCTGATATCCACACATGATCTTCTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGCTTCTTGTTTCAGTGTCTGATATCCACACATGATCTTCTGGAC  200

seq1  TCCTCCAAAGGGCTGGTGTCACTTTTCCAGTTCTGCCTTCTCTGGTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAAAGGGCTGGTGTCACTTTTCCAGTTCTGCCTTCTCTGGTACTC  250

seq1  TAAGCTCAGGTTGATCCCATCTACTTTGGCTGCTATTCTTGGTGTACTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCAGGTTGATCCCATCTACTTTGGCTGCTATTCTTGGTGTACTGG  300

seq1  CATCTCCAATATGCTGGGGTCTTCCCCTGAAAATAGGCTTAACCAATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCAATATGCTGGGGTCTTCCCCTGAAAATAGGCTTAACCAATAGC  350

seq1  CTCTTGTAGGCTCTCTTCATGGTGCGAAGCCTCAAATCCTGTAAGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTAGGCTCTCTTCATGGTGCGAAGCCTCAAATCCTGTAAGTTCAT  400

seq1  TCAAGCGTTGTGAGCAGTATATCTATGTTAAATTCTAACTGAAAGCTCTT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATTGTGAGCAGTATATCTATGTTAAATTCTAACTGAAAGCTCTT  450

seq1  CCTAATGCAACTATATTATGATCATACTCTATGGCAATGAGAATACTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGCAACTATATTATGATCATACTCTATGGCAATGAGAATACTTGG  500

seq1  GGCTCACAGCTGAAATGCAAACTTCCTTATCCCAGAGTGAATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAGCTGAAATGCAAACTTCCTTATCCCAGAGTGAATTC  544