BAC Information

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BAC

Clone NameB6Ng01-220K10
Chromosome1 (Build37)
Map Location 47,340,772 - 47,488,960
singlet/doubletdoublet
Overlap geneEG227061
Upstream geneDnahc7b, LOC666855, Slc39a10
Downstream geneLOC666869, LOC546734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220K10.bB6Ng01-220K10.g
ACCGA036155GA036156
length8931,152
definitionB6Ng01-220K10.b B6Ng01-220K10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,488,073 - 47,488,960)(47,340,772 - 47,341,913)
sequence
gaattcttcacaatcttacccaggtgggaagcagcataggataagctaaa
ctataatgaagtatctgtttagatcattataataactctgtaagtagatt
tgatatcaagactgttgatatgctaatattttataacactgatgaagatt
tagaaattgtaacaaacaagatggaaactccaaagcctgtgagaaatggg
gcaagatgccaacaagttctgataacaacaaagattaaatacaaagcaaa
gatttgctgtgtttactaagtgtgctagagaaaaaaattaataactaatg
ctttatttgaaacaagaatcaagaaaattaataaatgcaattgctagtaa
gcaacataatgaagtcccattaagacttgcaacttatcttttctccttcc
taatgaggggactttgcgaatgtaacattcatttaccttcagtttctttt
tcaagaaaacaatgcaaacactgggataagtgttttatcccagtataagt
tgggattaaaagtttaataaaacatatatggtatatgtaattctaaaaca
aagaaaattcactctaatataaaatttcttataataaaacttataataat
agtataatgtagactaagtagaacatgagtggatgctcaacagcatgtaa
gattccaagagaaggaacttaacagacctttgtgaggtcctgattctcta
attgatttgactggggtataaaaacactgtacttttcaaaacatgccacc
aaaatccagatgctgataaatatattttataaaacctaagagggttttta
cagagataaacatttgggtggtatattcctttatttgttgttgcttcctt
gctgcctgcccgttgtattgttgctttggagattatgaataac

gaattctatccaacaaaatataattctctttctaggtatttattgataaa
gttatacttttatcaaattaaaatagttgtgctgttatacttctctgtgc
tctatagttttggattggcatgctaaaaacactagatcttattattaaaa
tttcactaggctgtgattttaattacttcattatgtttctttctttctac
agcatagtttatttaatatatagtcatttggagaacatttaaattgcttc
caacttctagaaggttacaggcagtacctgcaggctaccaacttgtttta
tttcacgtttgtcactttgtaattgctgttgcaaactttagtagcttgac
aggaggtagaaagcagcaagtttggtaaatgtggtaattactatccttgt
caatgtttctaagattttttttttttttgttaaaaaaaatctagatgtag
agtcttaaaattaaaccacttttctttgaattaaataaaaattccatgtc
ttgaaaaccgatgagaaatagaacaaattgtttcagaaataaaaaatttt
cataagattaatctttaagaagcattataatagtaatattttgtcactga
gagcctgatcgcttcagaatgaaagaactggcttatcaaaacatgggaaa
aacagcttactgtttttcctgatttatctaataaatgttgtttaagaaac
aaacaaccgaaaaaggaagaatgcaaattttcaagctgcatcatggaaat
cccttcaattaagcattggctaccttgggagaagaaagatggattgataa
aagctattaaatttgaattaatgcatactttatagactctacacagttaa
ggagaatagtaaaccttaaaggtggccattgcaggctttccatggccctt
tataatttaattttcatcctcccaagtattgtgatgtaatgccagcagac
ccatttattgctgccagaagacgaaaataacaggcttcagcaggcgtagg
ccaatcaagaagtccattgttctaaaattcttcctggtgtttattaatgt
taaaagtgttgagcatctgattttttttctgtttatgttaaatcgtgccg
aattctggagtgttcccaatgtcccacaggccataattccactctatgac
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47488073_47488960
seq2: B6Ng01-220K10.b_47_939 (reverse)

seq1  GTTATTCATAATCTCCAAAGCAACAATACAAC-GGCA-GCAGCAAGGAAG  48
      |||||||||||||||||||||||||||||||| |||| ||||||||||||
seq2  GTTATTCATAATCTCCAAAGCAACAATACAACGGGCAGGCAGCAAGGAAG  50

seq1  CAACAACAAATAAAGGAATATACCACCCAAATGTTTATCTCTGTAAAAAC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAATAAAGGAATATACCACCCAAATGTTTATCTCTGTAAAAAC  100

seq1  CCTCTTAGGTTTTATAAAATATATTTATCAGCATCTGGA-TTTGGTGGCA  147
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCTCTTAGGTTTTATAAAATATATTTATCAGCATCTGGATTTTGGTGGCA  150

seq1  TGTTTTGAAAAGTACAGTGTTTTTATA-CCCAGTC-AATCAATTAGAGAA  195
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  TGTTTTGAAAAGTACAGTGTTTTTATACCCCAGTCAAATCAATTAGAGAA  200

seq1  TCAGGACCTCACAAAGGTCTGTTAAGTTCCTTCTCTTGGAATCTTACATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACCTCACAAAGGTCTGTTAAGTTCCTTCTCTTGGAATCTTACATG  250

seq1  CTGTTGAGCATCCACTCATGTTCTACTTAGTCTACATTATACTATTATTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGCATCCACTCATGTTCTACTTAGTCTACATTATACTATTATTA  300

seq1  TAAGTTTTATTATAAGAAATTTTATATTAGAGTGAATTTTCTTTGTTTTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTATTATAAGAAATTTTATATTAGAGTGAATTTTCTTTGTTTTA  350

seq1  GAATTACATATACCATATATGTTTTATTAAACTTTTAATCCCAACTTATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACATATACCATATATGTTTTATTAAACTTTTAATCCCAACTTATA  400

seq1  CTGGGATAAAACACTTATCCCAGTGTTTGCATTGTTTTCTTGAAAAAGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATAAAACACTTATCCCAGTGTTTGCATTGTTTTCTTGAAAAAGAA  450

seq1  ACTGAAGGTAAATGAATGTTACATTCGCAAAGTCCCCTCATTAGGAAGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGTAAATGAATGTTACATTCGCAAAGTCCCCTCATTAGGAAGGA  500

seq1  GAAAAGATAAGTTGCAAGTCTTAATGGGACTTCATTATGTTGCTTACTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATAAGTTGCAAGTCTTAATGGGACTTCATTATGTTGCTTACTAG  550

seq1  CAATTGCATTTATTAATTTTCTTGATTCTTGTTTCAAATAAAGCATTAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGCATTTATTAATTTTCTTGATTCTTGTTTCAAATAAAGCATTAGT  600

seq1  TATTAATTTTTTTCTCTAGCACACTTAGTAAACACAGCAAATCTTTGCTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTTTTTTCTCTAGCACACTTAGTAAACACAGCAAATCTTTGCTT  650

seq1  TGTATTTAATCTTTGTTGTTATCAGAACTTGTTGGCATCTTGCCCCATTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAATCTTTGTTGTTATCAGAACTTGTTGGCATCTTGCCCCATTT  700

seq1  CTCACAGGCTTTGGAGTTTCCATCTTGTTTGTTACAATTTCTAAATCTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGCTTTGGAGTTTCCATCTTGTTTGTTACAATTTCTAAATCTTC  750

seq1  ATCAGTGTTATAAAATATTAGCATATCAACAGTCTTGATATCAAATCTAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTTATAAAATATTAGCATATCAACAGTCTTGATATCAAATCTAC  800

seq1  TTACAGAGTTATTATAATGATCTAAACAGATACTTCATTATAGTTTAGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGTTATTATAATGATCTAAACAGATACTTCATTATAGTTTAGCT  850

seq1  TATCCTATGCTGCTTCCCACCTGGGTAAGATTGTGAAGAATTC  888
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTATGCTGCTTCCCACCTGGGTAAGATTGTGAAGAATTC  893


seq1: chr1_47340772_47341913
seq2: B6Ng01-220K10.g_65_1216

seq1  GAATTCTATCCAACAAAATATAATTCTCTTTCTAGGTATTTATTGATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCAACAAAATATAATTCTCTTTCTAGGTATTTATTGATAAA  50

seq1  GTTATACTTTTATCAAATTAAAATAGTTGTGCTGTTATACTTCTCTGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACTTTTATCAAATTAAAATAGTTGTGCTGTTATACTTCTCTGTGC  100

seq1  TCTATAGTTTTGGATTGGCATGCTAAAAACACTAGATCTTATTATTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGTTTTGGATTGGCATGCTAAAAACACTAGATCTTATTATTAAAA  150

seq1  TTTCACTAGGCTGTGATTTTAATTACTTCATTATGTTTCTTTCTTTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTAGGCTGTGATTTTAATTACTTCATTATGTTTCTTTCTTTCTAC  200

seq1  AGCATAGTTTATTTAATATATAGTCATTTGGAGAACATTTAAATTGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTTTATTTAATATATAGTCATTTGGAGAACATTTAAATTGCTTC  250

seq1  CAACTTCTAGAAGGTTACAGGCAGTACCTGCAGGCTACCAACTTGTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTAGAAGGTTACAGGCAGTACCTGCAGGCTACCAACTTGTTTTA  300

seq1  TTTCACGTTTGTCACTTTGTAATTGCTGTTGCAAACTTTAGTAGCTTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACGTTTGTCACTTTGTAATTGCTGTTGCAAACTTTAGTAGCTTGAC  350

seq1  AGGAGGTAGAAAGCAGCAAGTTTGGTAAATGTGGTAATTACTATCCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTAGAAAGCAGCAAGTTTGGTAAATGTGGTAATTACTATCCTTGT  400

seq1  CAATGTTTCTAAGATTTTTTTTTTTTTTGTTAAAAAAAATCTAGATGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCTAAGATTTTTTTTTTTTTTGTTAAAAAAAATCTAGATGTAG  450

seq1  AGTCTTAAAATTAAACCACTTTTCTTTGAATTAAATAAAAATTCCATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAAAATTAAACCACTTTTCTTTGAATTAAATAAAAATTCCATGTC  500

seq1  TTGAAAACCGATGAGAAATAGAACAAATTGTTTCAGAAATAAAAAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAACCGATGAGAAATAGAACAAATTGTTTCAGAAATAAAAAATTTT  550

seq1  CATAAGATTAATCTTTAAGAAGCATTATAATAGTAATATTTTGTCACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATTAATCTTTAAGAAGCATTATAATAGTAATATTTTGTCACTGA  600

seq1  GAGCCTGATCGCTTCAGAATGAAAGAACTGGCTTATCAAAACATGGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGATCGCTTCAGAATGAAAGAACTGGCTTATCAAAACATGGGAAA  650

seq1  AACAGCTTACTGTTTTTCCTGATTTATCTAATAAATGTTGTTTAAGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTTACTGTTTTTCCTGATTTATCTAATAAATGTTGTTTAAGAAAC  700

seq1  AAACAACCGAAAAAGGAAGAATGCAAATTTTCAAGCTGCATCATGGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACCGAAAAAGGAAGAATGCAAATTTTCAAGCTGCATCATGGAAAT  750

seq1  CCCTTCAATTAAGCATTGGCTACCTTGGGAGAAGAAAGATGGATTGATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAATTAAGCATTGGCTACCTTGGGAGAAGAAAGATGGATTGATAA  800

seq1  AAGCTATTAAATTTGAATTAATGCATACTTTATAGACTCTACACAGTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTAAATTTGAATTAATGCATACTTTATAGACTCTACACAGTTAA  850

seq1  GGAGAATAGTAAA-CTTAAAGGTGGCCATTGCAGGCTTTCCATGGCCCTT  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGAGAATAGTAAACCTTAAAGGTGGCCATTGCAGGCTTTCCATGGCCCTT  900

seq1  TATAATTTTATTTTCATC--TCCAAGTAATGTGGATGTAATGCCAGCAGA  947
      |||||||| |||||||||   ||||||| ||| |||||||||||||||||
seq2  TATAATTTAATTTTCATCCTCCCAAGTATTGT-GATGTAATGCCAGCAGA  949

seq1  CCAATT--ATGCTG-CAG-AGACG-AAATAACAGGCTTCAGCA-GCTT--  989
      || |||   ||||| ||| ||||| |||||||||||||||||| || |  
seq2  CCCATTTATTGCTGCCAGAAGACGAAAATAACAGGCTTCAGCAGGCGTAG  999

seq1  GGCAATCAAG-AGTCCATTG-TCTAAAATTCTTCCTGGTGTTTA-TAATG  1036
      | |||||||| ||||||||| ||||||||||||||||||||||| |||||
seq2  GCCAATCAAGAAGTCCATTGTTCTAAAATTCTTCCTGGTGTTTATTAATG  1049

seq1  -TAAAAGTGTTGAGGCATCTGTTTTTTTTTTTTTTTTTTATTTTTTAAAT  1085
       |||||||||||| ||||||| |||||||| | ||     | | ||||||
seq2  TTAAAAGTGTTGA-GCATCTGATTTTTTTTCTGTT-----TATGTTAAAT  1093

seq1  CGTGGCAGAATTCT-GAGTGTTCTCAGTGT-CCACAGGGCCATATATC--  1131
      ||| || ||||||| |||||||| || ||| ||||| |||||||  ||  
seq2  CGT-GCCGAATTCTGGAGTGTTCCCAATGTCCCACA-GGCCATAATTCCA  1141

seq1  ATCTATGACCT  1142
       ||||||||||
seq2  CTCTATGACCT  1152


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