BAC Information

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BAC

Clone NameB6Ng01-220L19
Chromosome1 (Build37)
Map Location 131,565,924 - 131,566,763
singlet/doubletsinglet
Overlap geneThsd7b
Upstream geneLOC100042732
Downstream geneLOC100042745, LOC100042740, Daf2, Cd55, Zp3r, C4bp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220L19.b
ACCGA036221
length839
definitionB6Ng01-220L19.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaggcgagctggcgtggggttcctctcctaaactcttcctgga
actatgggagaagacattctctactgcattattcattaacttgaatgaaa
tttcttgctgaactttgatctatgaagatggcttatcaccctcaccctac
tacaaagaatgatggaatgagaagacagcttggctagttgaaacataaaa
agaatggaatgggaaaattgagagcccctgacatttttcttgtcatacca
acgcccattctgctttcaggtgtatgagtttcttctttgctttgaaatca
gaacgaagtgggctcatattacctacatcattaggtgcccaaagtaagat
gaggtccacttggtgtgttgagtgcatctacatctttgaaagcaaatgcc
aatgacacatcatgcagtgagaatttatgtgtatggagtctgtccctgta
gtagtttcagtcctggtaaagcttaaagggttttagctttcaaggagctt
accttaaaagcttgcatggcaccaataaatacaggaggaccgattctcgg
ttctcagggcatccgagtccccctagcgaatctcatgcatagttataaga
aaaggacaggttctaattatatatggagcacaactgtgctactaatgtta
ttgggaattgttctgggtcctcgagttttgatgttatatgatgtactact
tagcttcacattgttatgaggaaatatctgacaaaagcgactttccatta
gggaggaaagattcactcctgttctcatatccagaggaagccagggaatg
catggtggctcctcggtccatggtagctgaaccttgcag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131565924_131566763
seq2: B6Ng01-220L19.b_40_878 (reverse)

seq1  CTGCAAGGTTCAGCTACCATGGACAGAGGAGCCACCATGCATTCCCTGGC  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTGCAAGGTTCAGCTACCATGGACCGAGGAGCCACCATGCATTCCCTGGC  50

seq1  TTCCTCTGGATATGTGAACAGGAGTGAATCTTTCCTCCCT-TTGGAAAGT  99
      |||||||||||||| |||||||||||||||||||||||||  ||||||||
seq2  TTCCTCTGGATATGAGAACAGGAGTGAATCTTTCCTCCCTAATGGAAAGT  100

seq1  TGCTTTTGTCAGATATTTCCTCATAACAATGTGAAGCTAAGTAGTACATC  149
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTTGTCAGATATTTCCTCATAACAATGTGAAGCTAAGTAGTACATC  150

seq1  ATATAACCTCAAAACCCGAGGACCCAGAAAAATTCCCAATAACATTAGTA  199
      ||||||| ||||||| ||||||||||||| ||||||||||||||||||||
seq2  ATATAACATCAAAACTCGAGGACCCAGAACAATTCCCAATAACATTAGTA  200

seq1  GCACAGTTGTGCTCCATATATAATTAGAACCTGTCCTTTTCTTATAACTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTGTGCTCCATATATAATTAGAACCTGTCCTTTTCTTATAACTA  250

seq1  TGCATGAGATTCCTTAGGGTGACTTGGATGCCCTGAGAACCTAGAATCGG  299
      ||||||||||||  ||||| |||| |||||||||||||||| ||||||||
seq2  TGCATGAGATTCGCTAGGGGGACTCGGATGCCCTGAGAACCGAGAATCGG  300

seq1  TCCTCCTGTATTTATCTGTGCCATGCAAGCTTTTAAGGTAAGCTCCTTGA  349
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  TCCTCCTGTATTTATTGGTGCCATGCAAGCTTTTAAGGTAAGCTCCTTGA  350

seq1  AAGCTAAAACCCTTTAAGCTTTACCAGGACTGAAACTACTCTAGGGACAG  399
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  AAGCTAAAACCCTTTAAGCTTTACCAGGACTGAAACTACTACAGGGACAG  400

seq1  ACTCCATACACATAAATTCTCACTGCATGATGTGTCATTCTTTTTTGCTT  449
      |||||||||||||||||||||||||||||||||||||||    |||||||
seq2  ACTCCATACACATAAATTCTCACTGCATGATGTGTCATTGGCATTTGCTT  450

seq1  TCAAAGATGTAGATGCACTCAACACACCAAGTGGACCTCATCTTACTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGATGTAGATGCACTCAACACACCAAGTGGACCTCATCTTACTTTG  500

seq1  GGCACCTATTGATGTAGGTAATATGAGCCCACTTCGTACTGATTTCAAAG  549
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  GGCACCTAATGATGTAGGTAATATGAGCCCACTTCGTTCTGATTTCAAAG  550

seq1  CAAAGAAGAAACTCATACACCTGAAAGCAGAATGGCTGTTGGTATGACAC  599
      |||||||||||||||||||||||||||||||||||  |||||||||||| 
seq2  CAAAGAAGAAACTCATACACCTGAAAGCAGAATGGGCGTTGGTATGACA-  599

seq1  TGAAAAATGTCAGGGGCTCTCAATTTTCCCATTCCATTCTTTCTATGTTT  649
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAAAAATGTCAGGGGCTCTCAATTTTCCCATTCCATTCTTTTTATGTTT  649

seq1  CAACTTGCCAAGCTGTCTTCTCATTCCATCATTCTTTGTAGTAGGGTGAG  699
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGCCAAGCTGTCTTCTCATTCCATCATTCTTTGTAGTAGGGTGAG  699

seq1  CTTGATAAGCCATCTTCATAGATCAAAGCTCAGCAAGAAATTTCATTTAA  749
        |||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  GGTGATAAGCCATCTTCATAGATCAAAGTTCAGCAAGAAATTTCATTCAA  749

seq1  GATAATGAATAATGCAGTAGAGAATGTCTTCTCCCATAGTTCCAGGAAGA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGAATAATGCAGTAGAGAATGTCTTCTCCCATAGTTCCAGGAAGA  799

seq1  GTTTTGGAGAGGAACCCCACGCCATGCTCGCTTCTGAATTC  840
      |||| ||||||||||||||||||| |||||| | |||||||
seq2  GTTTAGGAGAGGAACCCCACGCCA-GCTCGCCTGTGAATTC  839