BAC Information

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BAC

Clone NameB6Ng01-220M21
Chromosome1 (Build37)
Map Location 125,263,461 - 125,386,617
singlet/doubletdoublet
Overlap geneDpp10
Upstream geneLOC666983
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220M21.bB6Ng01-220M21.g
ACCGA036272GA036273
length7881,130
definitionB6Ng01-220M21.b B6Ng01-220M21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,385,831 - 125,386,617)(125,263,461 - 125,264,595)
sequence
gaattcatcaaacaatccttgactccattctactccactgcctcattaaa
tgtaggtggctacttactacattactcctcaatttacagtttgatttgcc
ttgccctttcttgataagacaatttctagactagtaataaaagactcaaa
tgctaaagtatactagaaatatgacttagttgactttaactcttcctata
ggattgaggtctctggggccttccttgctacaagccacactagcatttat
atgcagtggtcttgtacagctcacctctagccaggcatgtcagcgagact
ttatgaactcagtttctggtcttactgaaaaagaaaatttcacagaaaac
tgtctgattctcgtgctcttgtgttctttttgctcccacttctacaatga
tctcgaagcccaaggattgggagttgtattgtatatgtgatcctctggaa
cagggctcccccactttgatgtttaaaattggttttctgtaatggtctct
gtctgatgaaaatccatgtaattatattatatctcaaaataagaaaagaa
atattttttaaaagaatactgtttaaaggtaggaatgttgttgaaggaaa
gataaggagtgagtttaaaatggtgtctttcagtagaagtatatttagtt
aaatacacttctcactgaatatctactttttccactgaaccagtgtttta
cagagggaaggagagagggagtatataaagagagagaagagagaaggggt
tgcagaaagggaatgagaaagggagagagagagagaga

gaattcagtactttaataattactaaacagatatacacaaaccaagctgc
cttgtatcaatatttcaaataacagaaacagatatgttataatattgagg
atgtatcaaaacaaacaagctaaccaaccaaacaaacaaacatacattct
cacacaataaggcacccattaagttgacagtcttcctagctatgatgatg
agtttttagctgtctacttaacagaacttagattcatctcataagagagt
cttaaccaggtaattatctatatcaacttggctctgggcccatctacaag
agattgcactgatgtgatgtggaagtatccaatccactgtgggcatcacc
attctctaggcaggaaaccttgaactaaatcagaatggagaaattcagct
gaacacactgaaagagcatatatgaattaatttctctttgctcttgattt
tggatatgaaacaagtagctatttatctgccctgacttcttcacaatgat
gactgtaatttggacttactacccaaataaacacttattttcctaagttg
catttcatcaagatatattttaccaagagcagaaaagaaagtagaacact
ggctaagccagaataattctaatttttcatttaataaatctgtcatgtga
ggcacaagagtatacttatcaaatctttagattcatttattttaataaaa
tataaaatacttacattattaatagaagagcatactggtttttctccata
aaatctttgggaaaggacaactgtaaaggaagttcttttaaagaaagagc
aaaatattaaagatggagagtcatttaaatgtaaaagtataagatgcaga
gaaagctgttcttgaagggtgtatgatgtgccaatttttaccatagtcat
caatgtgaagtattctagtctctctctttgcgagcttctttcttcttgaa
tagtttctttcatcacagaattgttttccaagaggaaataccctgaaaat
cataaaataagtgtctgtggacatccaggcgtaaatagttcacccacatc
acaccccacccctaccgaggatcaaggatactgcagaaggggaagaaccg
attattagatccacaattcagggtggacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125385831_125386617
seq2: B6Ng01-220M21.b_45_832 (reverse)

seq1  TCTCTCTCTCTCTCTCCCTTTCTCATTCCC-TTCTGCAACCCCTTCTCTC  49
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCCCTTTCTCATTCCCTTTCTGCAACCCCTTCTCTC  50

seq1  TTCTCTCTCTTTATATACTCCCTCTCTCCTTCCCTCTGTAAAACACTGGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTTTATATACTCCCTCTCTCCTTCCCTCTGTAAAACACTGGT  100

seq1  TCAGTGGAAAAAGTAGATATTCAGTGAGAAGTGTATTTAACTAAATATAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGAAAAAGTAGATATTCAGTGAGAAGTGTATTTAACTAAATATAC  150

seq1  TTCTACTGAAAGACACCATTTTAAACTCACTCCTTATCTTTCCTTCAACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGAAAGACACCATTTTAAACTCACTCCTTATCTTTCCTTCAACA  200

seq1  ACATTCCTACCTTTAAACAGTATTCTTTTAAAAAATATTTCTTTTCTTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTACCTTTAAACAGTATTCTTTTAAAAAATATTTCTTTTCTTAT  250

seq1  TTTGAGATATAATATAATTACATGGATTTTCATCAGACAGAGACCATTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATATAATATAATTACATGGATTTTCATCAGACAGAGACCATTAC  300

seq1  AGAAAACCAATTTTAAACATCAAAGTGGGGGAGCCCTGTTCCAGAGGATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCAATTTTAAACATCAAAGTGGGGGAGCCCTGTTCCAGAGGATC  350

seq1  ACATATACAATACAACTCCCAATCCTTGGGCTTCGAGATCATTGTAGAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACAATACAACTCCCAATCCTTGGGCTTCGAGATCATTGTAGAAG  400

seq1  TGGGAGCAAAAAGAACACAAGAGCACGAGAATCAGACAGTTTTCTGTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCAAAAAGAACACAAGAGCACGAGAATCAGACAGTTTTCTGTGAA  450

seq1  ATTTTCTTTTTCAGTAAGACCAGAAACTGAGTTCATAAAGTCTCGCTGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTTTCAGTAAGACCAGAAACTGAGTTCATAAAGTCTCGCTGAC  500

seq1  ATGCCTGGCTAGAGGTGAGCTGTACAAGACCACTGCATATAAATGCTAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGCTAGAGGTGAGCTGTACAAGACCACTGCATATAAATGCTAGT  550

seq1  GTGGCTTGTAGCAAGGAAGGCCCCAGAGACCTCAATCCTATAGGAAGAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTGTAGCAAGGAAGGCCCCAGAGACCTCAATCCTATAGGAAGAGT  600

seq1  TAAAGTCAACTAAGTCATATTTCTAGTATACTTTAGCATTTGAGTCTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCAACTAAGTCATATTTCTAGTATACTTTAGCATTTGAGTCTTTT  650

seq1  ATTACTAGTCTAGAAATTGTCTTATCAAGAAAGGGCAAGGCAAATCAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAGTCTAGAAATTGTCTTATCAAGAAAGGGCAAGGCAAATCAAAC  700

seq1  TGTAAATTGAGGAGTAATGTAGTAAGTAGCCACCTACATTTAATGAGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATTGAGGAGTAATGTAGTAAGTAGCCACCTACATTTAATGAGGCA  750

seq1  GTGGAGTAGAATGGAGTCAAGGATTGTTTGATGAATTC  787
      ||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTAGAATGGAGTCAAGGATTGTTTGATGAATTC  788


seq1: chr1_125263461_125264595
seq2: B6Ng01-220M21.g_68_1197

seq1  GAATTCAGTACTTTAATAATTACTAAACAGATATACACAAACCAAGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTTTAATAATTACTAAACAGATATACACAAACCAAGCTGC  50

seq1  CTTGTATCAATATTTCAAATAACAGAAACAGATATGTTATAATATTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCAATATTTCAAATAACAGAAACAGATATGTTATAATATTGAGG  100

seq1  ATGTATCAAAACAAACAAGCTAACCAACCAAACAAACAAACATACATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAAAACAAACAAGCTAACCAACCAAACAAACAAACATACATTCT  150

seq1  CACACAATAAGGCACCCATTAAGTTGACAGTCTTCCTAGCTATGATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATAAGGCACCCATTAAGTTGACAGTCTTCCTAGCTATGATGATG  200

seq1  AGTTTTTAGCTGTCTACTTAACAGAACTTAGATTCATCTCATAAGAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTAGCTGTCTACTTAACAGAACTTAGATTCATCTCATAAGAGAGT  250

seq1  CTTAACCAGGTAATTATCTATATCAACTTGGCTCTGGGCCCATCTACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCAGGTAATTATCTATATCAACTTGGCTCTGGGCCCATCTACAAG  300

seq1  AGATTGCACTGATGTGATGTGGAAGTATCCAATCCACTGTGGGCATCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCACTGATGTGATGTGGAAGTATCCAATCCACTGTGGGCATCACC  350

seq1  ATTCTCTAGGCAGGAAACCTTGAACTAAATCAGAATGGAGAAATTCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTAGGCAGGAAACCTTGAACTAAATCAGAATGGAGAAATTCAGCT  400

seq1  GAACACACTGAAAGAGCATATATGAATTAATTTCTCTTTGCTCTTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACTGAAAGAGCATATATGAATTAATTTCTCTTTGCTCTTGATTT  450

seq1  TGGATATGAAACAAGTAGCTATTTATCTGCCCTGACTTCTTCACAATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGAAACAAGTAGCTATTTATCTGCCCTGACTTCTTCACAATGAT  500

seq1  GACTGTAATTTGGACTTACTACCCAAATAAACACTTATTTTCCTAAGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTAATTTGGACTTACTACCCAAATAAACACTTATTTTCCTAAGTTG  550

seq1  CATTTCATCAAGATATATTTTACCAAGAGCAGAAAAGAAAGTAGAACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATCAAGATATATTTTACCAAGAGCAGAAAAGAAAGTAGAACACT  600

seq1  GGCTAAGCCAGAATAATTCTAATTTTTCATTTAATAAATCTGTCATGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGCCAGAATAATTCTAATTTTTCATTTAATAAATCTGTCATGTGA  650

seq1  GGCACAAGAGTATACTTATCAAATCTTTAGATTCATTTATTTTAATAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGAGTATACTTATCAAATCTTTAGATTCATTTATTTTAATAAAA  700

seq1  TATAAAATACTTACATTATTAATAGAAGAGCATACTGGTTTTTCTCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATACTTACATTATTAATAGAAGAGCATACTGGTTTTTCTCCATA  750

seq1  AAATCTTTGGGAAAGGACAACTGTAAAGGAAGTTCTTTTAAAGAAAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGGGAAAGGACAACTGTAAAGGAAGTTCTTTTAAAGAAAGAGC  800

seq1  AAAATATTAAAGATGGAGAGTCATTTAAATGTAAAAGTATAAGATGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAAAGATGGAGAGTCATTTAAATGTAAAAGTATAAGATGCAGA  850

seq1  GAAAGCTGTTCTTGAAGGGTGTATGATGTGCCAATTTTTACCATAGTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGTTCTTGAAGGGTGTATGATGTGCCAATTTTTACCATAGTCAT  900

seq1  CAATGTGAAGTATTCTAGTCTCTCTCTTTGCGAGCTTC-TTCTTC-TGAA  948
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  CAATGTGAAGTATTCTAGTCTCTCTCTTTGCGAGCTTCTTTCTTCTTGAA  950

seq1  TAGTTTCTTTCATCACAGAATTGTTTTCCAAGAGGAAATACCCTGAAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTTTCATCACAGAATTGTTTTCCAAGAGGAAATACCCTGAAAAT  1000

seq1  CATAAAATAAGTGTCTGTGGAACATCCAGGCGTAAATAGTTCACCCACAT  1048
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATAAAATAAGTGTCTGTGG-ACATCCAGGCGTAAATAGTTCACCCACAT  1049

seq1  CACACCCCAACCCCTACCCAAGGATCAGGGATTACTGCAGGAAAGGGGGA  1098
      |||||||| ||||||| || ||||||| ||| ||||||||   | |||||
seq2  CACACCCC-ACCCCTA-CCGAGGATCAAGGA-TACTGCAG---AAGGGGA  1093

seq1  AGAACAGATTATTAGAATCACAAATCAAGGTGGACCA  1135
      ||||| ||||||||||  ||||| ||| |||||||||
seq2  AGAACCGATTATTAGATCCACAATTCAGGGTGGACCA  1130


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