BAC Information

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BAC

Clone NameB6Ng01-220O08
Chromosome1 (Build37)
Map Location 75,674,986 - 75,806,928
singlet/doubletdoublet
Overlap genenone
Upstream geneStk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220O08.bB6Ng01-220O08.g
ACCGA036339GA036340
length856816
definitionB6Ng01-220O08.b B6Ng01-220O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,674,986 - 75,675,841)(75,806,113 - 75,806,928)
sequence
gaattctctcacaggcttgtgtcagctccctgatactgctgtctgggggt
tatgtgaaggaggtcttccctttgatctctgtagatcacagagaggcata
gacctttgagcagcagtgtttcagagccgggctttatggcttttgtattt
ttcttttggctgttccaggggaagtgctcactgaagctgtgagcatcttt
tgtgacagtttcccatagggtgtaaatgtaccttgccacccaccttgaga
aggttgttatttatttatctatttggcacttgaaagtaaaacaaagtact
agtgccattaatggaaagctagacttttctcttttgctggtacccgtgac
aggttcattgatgctgtcccaggctgctcgccccttttcaaactgcaact
tttaagctcattactctttggtggattaattcctgatgctcccctttgac
actctctttacttgcactgacagagcgcaatgctgccaggtcccctctcc
cccactatgtcggagctgatgccttgatcctttccccccttcacgaacgg
acaggtacatctgggcaaaccttcagtatgcacctggtggttcaggcctc
acggacccagctttaagcctctttgatgtcctaactgcctcgtgttctca
acgctcagtgtttcttttcttttctcaagagactgcttttggaaactttt
tacaagggcatggaacaaattttgcttcatctgtcatagggtggagggtc
atctaggacagtgtggaaggcccaagccaagggggagctgccagagagtg
agttctgattccaacactgcttattttatttttgtgtgtggtatgtgtgt
gtgtag
gaattcagtggctacctatgtggagaatttaagcccagtgagagaccctg
tctcaaaactcaggtagaaaatgactgaagagtaacaatcaaagttgtcc
tctactccctcccatcgaaagaaaaataaaaaaaaggtaaaggtgatttt
attcagttgttctgctacaggcagagcagctcttcacacaaataagggtt
aaatgtcaactgcactaatgtgagaagtttatgttctatgtccttttact
tccagaggccaacaggaaataaaaataaaaagatatagcaagaatatggg
tctcatatagatgatgtaacaggaagaaactgttatttttataagcaggg
catatttttgagccaggaaacttagaagacagacgggatttctcatagaa
aacttttctcttggttataaaagaaaaggtatcaaaatattttatttcgg
aaggacggggcccatggaaataccttaaataaagaagtaagttcttttgg
taagagaagtaccagggctgaagaaatttactggtggctaactatcgctg
aaggaagagatttgaaagaaatgaaccaaaggaaaaggaagacagagaga
gccttaaactggagaggctgtgcactgaagggggaagctagagagaaatt
tccatgctaaaaggccaaggcagttctatcagtcaggaaagtattgtctg
cagtttgaaatgtgatcctaaaccttgggtaacatatgctatatgtgaga
tctttgtgttgttggagccttgtgatggaatcagttcgagatgacgggag
agaggcggggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75674986_75675841
seq2: B6Ng01-220O08.b_48_903

seq1  GAATTCTCTCACAGGCTTGTGTCAGCTCCCTGATACTGCTGTCTGGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCACAGGCTTGTGTCAGCTCCCTGATACTGCTGTCTGGGGGT  50

seq1  TATGTGAAGGAGGTCTTCCCTTTGATCTCTGTAGATCACAGAGAGGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAAGGAGGTCTTCCCTTTGATCTCTGTAGATCACAGAGAGGCATA  100

seq1  GACCTTTGAGCAGCAGTGTTTCAGAGCCGGGCTTTATGGCTTTTGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTGAGCAGCAGTGTTTCAGAGCCGGGCTTTATGGCTTTTGTATTT  150

seq1  TTCTTTTGGCTGTTCCAGGGGAAGTGCTCACTGAAGCTGTGAGCATCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGGCTGTTCCAGGGGAAGTGCTCACTGAAGCTGTGAGCATCTTT  200

seq1  TGTGACAGTTTCCCATAGGGTGTAAATGTACCTTGCCACCCACCTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGTTTCCCATAGGGTGTAAATGTACCTTGCCACCCACCTTGAGA  250

seq1  AGGTTGTTATTTATTTATCTATTTGGCACTTGAAAGTAAAACAAAGTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTATTTATTTATCTATTTGGCACTTGAAAGTAAAACAAAGTACT  300

seq1  AGTGCCATTAATGGAAAGCTAGACTTTTCTCTTTTGCTGGTACCCGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCATTAATGGAAAGCTAGACTTTTCTCTTTTGCTGGTACCCGTGAC  350

seq1  AGGTTCATTGATGCTGTCCCAGGCTGCTCGCCCCTTTTCAAACTGCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATTGATGCTGTCCCAGGCTGCTCGCCCCTTTTCAAACTGCAACT  400

seq1  TTTAAGCTCATTACTCTTTGGTGGATTAATTCCTGATGCTCCCCTTTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTCATTACTCTTTGGTGGATTAATTCCTGATGCTCCCCTTTGAC  450

seq1  ACTCTCTTTACTTGCACTGACAGAGCGCAATGCTGCCAGGTCCCCTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTTTACTTGCACTGACAGAGCGCAATGCTGCCAGGTCCCCTCTCC  500

seq1  CCCACTATGTCGGAGCTGATGCCTTGATCCTTTCCCCCCTTCACGAACGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTATGTCGGAGCTGATGCCTTGATCCTTTCCCCCCTTCACGAACGG  550

seq1  ACAGGTACATCTGGGCAAACCTTCAGTATGCACCTGGTGGTTCAGGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACATCTGGGCAAACCTTCAGTATGCACCTGGTGGTTCAGGCCTC  600

seq1  ACGGACCCAGCTTTAAGCCTCTTTGATGTCCTAACTGCCTCGTGTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGACCCAGCTTTAAGCCTCTTTGATGTCCTAACTGCCTCGTGTTCTCA  650

seq1  ACGCTCAGTGTTTCTTTTCTTTTCTCAAGAGACTGCTTTTGGAAACTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCAGTGTTTCTTTTCTTTTCTCAAGAGACTGCTTTTGGAAACTTTT  700

seq1  TACAAGGGCATGGAACAAATTTTGCTTCATCTGTCATAGGGTGGAGGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGGCATGGAACAAATTTTGCTTCATCTGTCATAGGGTGGAGGGTC  750

seq1  ATCTAGGACAGTGTGGAAGGCCCAAGCCAAGGGGGAGCTGCCAGAGAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGACAGTGTGGAAGGCCCAAGCCAAGGGGGAGCTGCCAGAGAGTG  800

seq1  AGTTCTGATTCCAACACTGCTTATTTTATTTTTGTGTGTGGTATGTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGATTCCAACACTGCTTATTTTATTTTTGTGTGTGGTATGTGTGT  850

seq1  GTGTAG  856
      ||||||
seq2  GTGTAG  856

seq1: chr1_75806113_75806928
seq2: B6Ng01-220O08.g_66_881 (reverse)

seq1  CCCTCCCCCCGCCTCTCTCCCGTCATCTCGAACTGATTCCATCACAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCGCCTCTCTCCCGTCATCTCGAACTGATTCCATCACAAGGC  50

seq1  TCCAACAACACAAAGATCTCACATATAGCATATGTTACCCAAGGTTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAACACAAAGATCTCACATATAGCATATGTTACCCAAGGTTTAGG  100

seq1  ATCACATTTCAAACTGCAGACAATACTTTCCTGACTGATAGAACTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTTCAAACTGCAGACAATACTTTCCTGACTGATAGAACTGCCTT  150

seq1  GGCCTTTTAGCATGGAAATTTCTCTCTAGCTTCCCCCTTCAGTGCACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTTAGCATGGAAATTTCTCTCTAGCTTCCCCCTTCAGTGCACAGC  200

seq1  CTCTCCAGTTTAAGGCTCTCTCTGTCTTCCTTTTCCTTTGGTTCATTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTTTAAGGCTCTCTCTGTCTTCCTTTTCCTTTGGTTCATTTCT  250

seq1  TTCAAATCTCTTCCTTCAGCGATAGTTAGCCACCAGTAAATTTCTTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCTCTTCCTTCAGCGATAGTTAGCCACCAGTAAATTTCTTCAGC  300

seq1  CCTGGTACTTCTCTTACCAAAAGAACTTACTTCTTTATTTAAGGTATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTACTTCTCTTACCAAAAGAACTTACTTCTTTATTTAAGGTATTTC  350

seq1  CATGGGCCCCGTCCTTCCGAAATAAAATATTTTGATACCTTTTCTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCCCGTCCTTCCGAAATAAAATATTTTGATACCTTTTCTTTTAT  400

seq1  AACCAAGAGAAAAGTTTTCTATGAGAAATCCCGTCTGTCTTCTAAGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGAGAAAAGTTTTCTATGAGAAATCCCGTCTGTCTTCTAAGTTTC  450

seq1  CTGGCTCAAAAATATGCCCTGCTTATAAAAATAACAGTTTCTTCCTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCAAAAATATGCCCTGCTTATAAAAATAACAGTTTCTTCCTGTTA  500

seq1  CATCATCTATATGAGACCCATATTCTTGCTATATCTTTTTATTTTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCTATATGAGACCCATATTCTTGCTATATCTTTTTATTTTTATTT  550

seq1  CCTGTTGGCCTCTGGAAGTAAAAGGACATAGAACATAAACTTCTCACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGGCCTCTGGAAGTAAAAGGACATAGAACATAAACTTCTCACATT  600

seq1  AGTGCAGTTGACATTTAACCCTTATTTGTGTGAAGAGCTGCTCTGCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGTTGACATTTAACCCTTATTTGTGTGAAGAGCTGCTCTGCCTGT  650

seq1  AGCAGAACAACTGAATAAAATCACCTTTACCTTTTTTTTATTTTTCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACAACTGAATAAAATCACCTTTACCTTTTTTTTATTTTTCTTTC  700

seq1  GATGGGAGGGAGTAGAGGACAACTTTGATTGTTACTCTTCAGTCATTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGAGGGAGTAGAGGACAACTTTGATTGTTACTCTTCAGTCATTTTC  750

seq1  TACCTGAGTTTTGAGACAGGGTCTCTCACTGGGCTTAAATTCTCCACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAGTTTTGAGACAGGGTCTCTCACTGGGCTTAAATTCTCCACATA  800

seq1  GGTAGCCACTGAATTC  816
      ||||||||||||||||
seq2  GGTAGCCACTGAATTC  816