BAC Information

Click to search

BAC

Clone NameB6Ng01-221N19
Chromosome1 (Build37)
Map Location 97,200,315 - 97,200,725
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666025, LOC100040685, LOC383603
Downstream geneTmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221N19.bB6Ng01-221N19.g
ACCGA037036GA037037
length1,235846
definitionB6Ng01-221N19.b B6Ng01-221N19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacatcaatgacagacactaccttatcgtcaagggtaggaaaaa
aattttcttgaaaataaggaaagacaaaccgttacggatgttattcgacc
acattttgactttcgatgaacattaggaaatcgacacatcatattctaat
tatatcactgagtatatttaagatgtcgtttttaaggatgaatccaaaaa
tgccgtggaactgtgtgtgtgagagtattactaatgcttaaatcacactt
ccaatatcatacattggtagtgagagacttcaacaccttgctttaaccaa
aagacagattatcgaggcagaacctaagcaaaaatcagaaataatgaaac
aagcagaagttatgaatcaacgggacttaacagatacctttagaacattt
cacccaaacaagaaagaatataccttctcagcaccccatggaaccttgtc
caaaagtggccatgtagttgcttacaaagcaaaccttaagagatacatga
aaactgaaataattacctgtctcttaacagaccacaatggatcaaactgg
atttcaacagcagtataaacaacagaaagccaacaaattcctggaaacta
acaaccctctactcaatgattactcaatgggtcagagaagaaatatatta
aagacattgtaaaattcaatgaagatgaaggcagaacatactgaaaccta
aaggatacaatgaaagcagtgttaagaggcaaattcatagcactaagttc
caattgagtactactcagctattaacaaaatggagttatgaaattcttga
acaaatggatgtacctggaggatatcatccttactgagataaccccaatc
acaaaagaagtcattagatatgcactcacttataaatgggatatttagaa
acatagaacaccccaagattcaatttgcaaaacacaagaaaattcaagaa
gagtgaagacccattttgtggataattcaattcctcctttagaataaggg
aacaaaaatacccatgaaaaggagttatagagacaaagtttggagctaag
tatgaaaggatggactatcagagactgccccactggggaattcaatccca
tagtcagcaaccaggccagaacatctactgcctattggccagaaagtttt
tgcttggaagtaacttgtttatgctgcttcatattggagagtgtgcgtgt
gtcaaattatcatgaaggtgtaatgatcctcacat
gaattctctgctgagacataacacatggctgataacctcctaattaaatg
ttcaacatccgggttgatcccggaaatgggcatcaaaacaaccctgagac
tccacttcactccagccagatcttgtgagactatgccggggcctagcaaa
cacccaaggagatgatcacttgcatctaatggatgggtcacagggccccc
atactttttagtttctgaaatgacccgttgattttgttggaactggttcc
cttgagggggaacacccacatgaactaaccagtaccccagagctcttgca
tctccctgcatatggaatgaattaccgcctcttcggccccccctgggcat
ataggcccattggacttgcatgctgtatatgccccaagacaggggaacca
ttagggatcagaaggggattgggtgggtagggaaatatccactaagttac
aatcaatgtttcacatatttcagtggtaaccaacagcttcctaaattgac
ttaaagtacaccaaatgtgattgatgtaattttctttaattataaacaca
tttttaaaatattagatttttttattttaaatgttgttttgtatcttata
tcatgagcaatggttttatggtgcattggatttttacgtgtgatctaaaa
ttctgaatttaaatccttccaagttattcattttacttcttacatatttt
actttaaacaacaacaataagaaagatactctgaaatgcctgaaatggag
ttctaatactttgctgtaatttgtctctttatgtgttcacttatttatgc
tttcttggacatggtcccttgggactcacacttgaaagacatgcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97200315_97200725
seq2: B6Ng01-221N19.g_495_908

seq1  AAATATCCACTAAGTTACAATCAATGTTTCACATATTTCAGTGGTAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCACTAAGTTACAATCAATGTTTCACATATTTCAGTGGTAACCA  50

seq1  ACAGCTTCCTAAATTGACTTAAAGTACACCAAATGTGATTGATGTAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTCCTAAATTGACTTAAAGTACACCAAATGTGATTGATGTAATTT  100

seq1  TCTTTAATTATAAACACATTTTTAAAATATTAGATTTTTTTATTTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTATAAACACATTTTTAAAATATTAGATTTTTTTATTTTAAAT  150

seq1  GTTGTTTTGTATCTTATATCATGAGCAATGGTTTTATGGTGCATTGGA-T  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTGTTTTGTATCTTATATCATGAGCAATGGTTTTATGGTGCATTGGATT  200

seq1  TTTACGTGTGATCTAAAA-TCTGAATTTTAAATCCTTCCAAGTTATTCAT  248
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  TTTACGTGTGATCTAAAATTCTGAA-TTTAAATCCTTCCAAGTTATTCAT  249

seq1  TTTACTTCTAACATA-TTTACTTTAAACAACAACAATAAGAAAGATACTC  297
      ||||||||| ||||| ||||||||||||||||||||||||||||||||||
seq2  TTTACTTCTTACATATTTTACTTTAAACAACAACAATAAGAAAGATACTC  299

seq1  TGAAATGCCTGAAATGGAGTTCTAATACTTTGCTGTAATTTGTCTCTTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCCTGAAATGGAGTTCTAATACTTTGCTGTAATTTGTCTCTTTA  349

seq1  TGTGTTCACTTATTTATGCTTTCTT-GACATGGTCCCTTGGGACTCACAC  396
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTGTTCACTTATTTATGCTTTCTTGGACATGGTCCCTTGGGACTCACAC  399

seq1  TTGAAAGACAAGCGT  411
      |||||||||| ||||
seq2  TTGAAAGACATGCGT  414