BAC Information

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BAC

Clone NameB6Ng01-222G09
Chromosome1 (Build37)
Map Location 35,141,631 - 35,142,759
singlet/doubletsinglet
Overlap genenone
Upstream geneDst, LOC100040913, LOC383629, LOC100040938, Ccdc115, Imp4, Ptpn18, Tesp1, Cfc1, Tesp2, 9430069J07Rik, AA619741, Arhgef4, BC043098, Plekhb2, LOC666261
Downstream geneLOC100041544, LOC666283, LOC100041091, EG666290, Hs6st1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222G09.bB6Ng01-222G09.g
ACCGA037428GA037429
length1,1261,186
definitionB6Ng01-222G09.b B6Ng01-222G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggggcttgctgcacagctggccaaaacacttagtgagtttgg
ggctattggaagacattgtctcaaataaaaaagtatatcgctcctaagga
ataatacctgaggttgcccttggtctctacttccatgtgtgcctgtaaca
tcaaaattgtgtgcttcctactgctccccttctctatcttactttacaca
cacacacacacacacacacacacagagagagagagagagagagagagaga
gagagagagagagagagagagagagcccaagaaggggttacccctggtaa
caagcagatttacctttccacgtaattggtcagaagtaagtcacttgctg
actttccacctgcaaggcaggtcactagatgagtgtgtatcttggaggca
caagctcagatgagaagacgggagaagagaatgcttggtaggttagacca
acagtgttgcccaataggagagaagatatagtacaaggtttagccatagt
cagtagcaagtttgatggcttttgaccgtggattagagaataacccaatc
aatcaaatatgtacaattattaccttcaagcaagagagtgatatattatt
actacattaaaaagaagactaccaaagaatatttattgacatgcagatat
gttcatgagatattaatctgtgtcaactacaacatttgtcttagttgggg
ttttactgctgtgaacagacaccatgaccaaggcaagtcttagaaaaaac
aacatttaattggggctggattacaggttcagaggttctgtccattatca
tcaaggtgggagcatggcagcatccaggcagtcatggcacagcagagctg
agagttctatgtcttcatccaaaggctactagtggaagactgacttccag
gcaactagggtgaggatcttatgcccacacccacagtgacacacctactc
caaccaggtcacacctatccaacaggccacacctccaaatggtaccactc
cctggcccagaatatacaaatcactacaacatttaaccactgttctaacc
cataaagacatgtatctttgccataaatatttatacatggaataaaggaa
agcctctgaaatgtgttacctttatt
gaattctttatttagtctgagccccattttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatgttagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggcctt
tttttcttattgacggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttgtcaattctcgatctgacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatattcgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagttttgaccttaatacaaggagatagaaatggatcaatttgca
ttcttctatatgataactgccagttgtgccagcacaatttgttgaaaatg
ctgtcttttttccactgaatggtttttgctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccatttgt
ctacttgtctgttgctataccagtaccatgcagtttttttttttttaatc
acaattgctgtgtagtacagcttgaggtcaggcatggtgattccaccaga
ggttcttttattgttgagaatagtttttgctatcctaggtcttttgttat
tccagatgaatttgcagattgtcctctctaattcgttgaagaattgagtt
ggaattatgatggggattgcattgaatctgtagattgcttttggcaagat
agccatttttactatgttgatcctgccaatccatgagcatgggagatctt
tccatcttctgagatcttcttcaattttctttcttcaggagacttgaagt
tcttatcatacagatctttcacttccttagttagagtcatgccaaggtat
tttattattacttgtgactattgagagggtgttctttcctcaatttcttt
ctcagcctgtttattcttgtgtagaagaagggcattgacttgtttggagt
attttatatcagctatgtcacaagcttgtttatcagttaggagtctctgt
gcaattttagccctaattactatcatcatccgcaaggtatttgacttcat
tccaaggtgtatccctgtactctctcattggtggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_35141631_35142759
seq2: B6Ng01-222G09.b_43_1168 (reverse)

seq1  AATAAAAGTAACACATCTCAGA-GCTTTCCTTTTATCAATGTATAAATAT  49
      |||||| ||||||||| ||||| ||||||||||  || ||||||||||||
seq2  AATAAAGGTAACACATTTCAGAGGCTTTCCTTTATTCCATGTATAAATAT  50

seq1  TAATTGCAAAGATACATGTCTTTATGGGTTAGAACAGTGGTTAAATGTTG  99
      | || |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCAAAGATACATGTCTTTATGGGTTAGAACAGTGGTTAAATGTTG  100

seq1  TAGTGATTTGTATATTCTTGGGCCAGGGAGTGGTACCATTTGGAGGTGTG  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAGTGATTTGTATATTC-TGGGCCAGGGAGTGGTACCATTTGGAGGTGTG  149

seq1  GCCTTGTTGGAATAGGTGTGACCTGGTTGGAGTAGGTGTGTCACTGTGGG  199
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCC-TGTTGG-ATAGGTGTGACCTGGTTGGAGTAGGTGTGTCACTGTGGG  197

seq1  TGTGGGCATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCCACTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCCACTA  247

seq1  GTAGCCTTTGGATGAAGACATAGAACTCTCAGCTCTGCCTGTGCCATGAC  299
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTAGCCTTTGGATGAAGACATAGAACTCTCAGCTCTG-CTGTGCCATGAC  296

seq1  TGCCTGGATGCTGCCATGCTCCCACCTTGATGATAATGGACAGAACCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGATGCTGCCATGCTCCCACCTTGATGATAATGGACAGAACCTCT  346

seq1  GAACCTGTAATCCAGCCCCAATTAAATGTTGTTTTTTCTAAGACTTGCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGTAATCCAGCCCCAATTAAATGTTGTTTTTTCTAAGACTTGCCT  396

seq1  TGGTCATGGTGTCTGTTCACAGCAGTAAAACCCCAACTAAGACAAATGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGGTGTCTGTTCACAGCAGTAAAACCCCAACTAAGACAAATGTT  446

seq1  GTAGTTGACACAGATTAATATCTCATGAACATATCTGCATGTCAATAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGACACAGATTAATATCTCATGAACATATCTGCATGTCAATAAAT  496

seq1  ATTCTTTGGTAGTCTTCTTTTTAATGTAGTAATAATATATCACTCTCTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGGTAGTCTTCTTTTTAATGTAGTAATAATATATCACTCTCTTG  546

seq1  CTTGAAGGTAATAATTGTACATATTTGATTGATTGGGTTATTCTCTAATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGGTAATAATTGTACATATTTGATTGATTGGGTTATTCTCTAATC  596

seq1  CACGGTCAAAAGCCATCAAACTTGCTACTGACTATGGCTAAACCTTGTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCAAAAGCCATCAAACTTGCTACTGACTATGGCTAAACCTTGTAC  646

seq1  TATATCTTCTCTCCTATTGGGCAACACTGTTGGTCTAACCTACCAAGCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTCTCTCCTATTGGGCAACACTGTTGGTCTAACCTACCAAGCAT  696

seq1  TCTCTTCTCCCGTCTTCTCATCTGAGCTTGTGCCTCCAAGATACACACTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCCCGTCTTCTCATCTGAGCTTGTGCCTCCAAGATACACACTC  746

seq1  ATCTAGTGACCTGCCTTGCAGGTGGAAAGTCAGCAAGTGACTTACTTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTGACCTGCCTTGCAGGTGGAAAGTCAGCAAGTGACTTACTTCTG  796

seq1  ACCAATTACGTGGAAAGGTAAATCTGCTTGTTACCAGGGGTAACCCCTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTACGTGGAAAGGTAAATCTGCTTGTTACCAGGGGTAACCCCTTC  846

seq1  TTGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  896

seq1  TCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGTAAGATAGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAGTAAGATAGAGA  946

seq1  AGGGGAGCAGTAGGAAGCACACAATTTTGATGTTACAGGCACACATGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGCAGTAGGAAGCACACAATTTTGATGTTACAGGCACACATGGAA  996

seq1  GTAGAGACCAAGGGCAACCTCAGGTATTATTCCTTAGGAGCGATATACTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGACCAAGGGCAACCTCAGGTATTATTCCTTAGGAGCGATATACTT  1046

seq1  TTTTATTTGAGACAATGTCTTCCAATAGCCCCAAACTCACTAAGTGTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGAGACAATGTCTTCCAATAGCCCCAAACTCACTAAGTGTTTT  1096

seq1  GGCCAGCTGTGCAGCAAGCCCCAAGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  GGCCAGCTGTGCAGCAAGCCCCAAGAATTC  1126