BAC Information

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BAC

Clone NameB6Ng01-223E07
Chromosome1 (Build37)
Map Location 104,504,996 - 104,654,529
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041056
Downstream geneLOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223E07.bB6Ng01-223E07.g
ACCGA038061GA038062
length1,154305
definitionB6Ng01-223E07.b B6Ng01-223E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,504,996 - 104,505,682)(104,654,225 - 104,654,529)
sequence
gaattcttaagtttacataaactctatatgtactggatcaagagtcccag
ccctcatttccttagagcagaacaaaccacaacgcaaaagcacatttcca
tataggtgtacaagcctgttctttactgttagctggccacagctcttcta
gttttatggtacagcagacagctttctatagtaactgcatcaatataaaa
atagaaaaaaaatacaaactattaaaattaaaatgattccttacaatgtt
ttgaatttataacaataaaacagctctctctaatatcttttcaggcattg
ttatcttaatttcttcaatcagcgagaaaaacagaacactaacctgttat
acgcttctacagcatatttaattctctattcttcatttccttatcctagc
aattctatatcctcatgtactctccatctagtactatttatccatagatt
gtatataaatacctatttttctacccataccctttcccctctatccttaa
tatctcttaattcatcctagctaatcaatggagcagtctttggaccttaa
ggtacatgtgcttcttcatgattccaaattcaaggccaagtctagcaatg
aaccgtttacaaaaaggaccacgtaagtttttatggctcctatgattata
ttgcctatctaaatccttcaccatgaccctgaactcctgttcatcatcct
ccacagcctcatgaccatctccattcctcactcctgaaaactgcatctgt
tttatttactatgtcatgactagctcttggtaatggaggatgtatactct
ctagtaagtaggaatgtgtagtaaagacaacagatcaacttttaggcaac
agcaattatcagcacacgtgaggctcatggtttcaatggcctaaaggtgc
tccggggcaagaacagtcacacacacacacacacacacacacacacacac
acacacacacacttatgcagtcataagctccagggttaggaactatgtca
ctcccctcacacagtcatgattggggaacatggatgaatcctctggtctt
ttaatagcacttattagttacaaaaacagtgtctggtatcatttaattcc
ctatcacctctcttgaacattttcttgtccactgtgtacaaattacctct
gaaa

ttggcacttttctaccatctctcaccagagaaactttctacttcttcttg
gtgacttgatgaagaaaataaacaattaatattgagagccaatgcctgtt
tctttattggctttccaaataagtaaatttccaaacaacttggcttggct
gacaggagctctttttaatctattatgttattgtagttccatttatttat
ttatttattgtttgtttgtttatctctgtgtgtgcctgagtatgagtcta
agtcagaggaaactttaaaatcaatgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104504996_104505682
seq2: B6Ng01-223E07.b_506_1195

seq1  ATTTTTCTACCCATACCCTTTCCCCTCTATCCTTAATATCTCTTAATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTACCCATACCCTTTCCCCTCTATCCTTAATATCTCTTAATTCA  50

seq1  TCCTAGCTAATCAATGGAGCAGTCTTTGGACCTTAAGGTACATGTGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTAATCAATGGAGCAGTCTTTGGACCTTAAGGTACATGTGCTTC  100

seq1  TTCATGATTCCAAATTCAAGGCCAAGTCTAGCAATGAACCGTTTACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATTCCAAATTCAAGGCCAAGTCTAGCAATGAACCGTTTACAAAA  150

seq1  AGGACCACGTAAGTTTTTATGGCTCCTATGATTATATTGCCTATCTAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCACGTAAGTTTTTATGGCTCCTATGATTATATTGCCTATCTAAAT  200

seq1  CCTTCACCATGACCCTGAACTCCTGTTCATCATCCTCCACAGCCTCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCATGACCCTGAACTCCTGTTCATCATCCTCCACAGCCTCATGA  250

seq1  CCATCTCCATTCCTCACTCCTGAAAACTGCATCTGTTTTATTTACTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCATTCCTCACTCCTGAAAACTGCATCTGTTTTATTTACTATGT  300

seq1  CATGACTAGCTCTTGGTAATGGAGGATGTATACTCTCTAGTAAGTAGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTAGCTCTTGGTAATGGAGGATGTATACTCTCTAGTAAGTAGGAA  350

seq1  TGTGTAGTAAAGACAACAGATCAACTTTTAGGCAACAGCAATTATCAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGTAAAGACAACAGATCAACTTTTAGGCAACAGCAATTATCAGCA  400

seq1  CACGTGAGGCTCATGGTTTCAATGGCCTAAAGGTGCTCCGGGGCAAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGAGGCTCATGGTTTCAATGGCCTAAAGGTGCTCCGGGGCAAGAAC  450

seq1  AGTCACACACACACACACACACACACACACACACACACACACACACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACACACACACACACACACACACACACACACACACACACACACACTT  500

seq1  ATGCAGTCATAAGCTCCAGGGTTAGGAACTATGTCACTTCCCCTCACACA  550
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGCAGTCATAAGCTCCAGGGTTAGGAACTATGTCAC-TCCCCTCACACA  549

seq1  GTCATGATT-GGGAACATGGATGAATTCCTTCTGGTCTTTTTAATAGCAC  599
      ||||||||| ||||||||||||||||  | ||||||| ||||||||||||
seq2  GTCATGATTGGGGAACATGGATGAAT--CCTCTGGTC-TTTTAATAGCAC  596

seq1  T--ATAGTAACAAAAACAGTGTCTGGTTATCATTT-ATTCTCTATCA-CT  645
      |   |||| ||||||||||||||||| |||||||| |||| |||||| ||
seq2  TTATTAGTTACAAAAACAGTGTCTGG-TATCATTTAATTCCCTATCACCT  645

seq1  CTCTTGAACATTTTCTTGT-CACTGTG-ACAAAATA-CTCTGAAA  687
      ||||||||||||||||||| ||||||| ||||| || ||||||||
seq2  CTCTTGAACATTTTCTTGTCCACTGTGTACAAATTACCTCTGAAA  690


seq1: chr1_104654225_104654529
seq2: B6Ng01-223E07.g_73_377 (reverse)

seq1  ACACACACACACACACACACACACACACACATTGATTTTAAAGTTTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACATTGATTTTAAAGTTTCCTC  50

seq1  TGACTTAGACTCATACTCAGGCACACACAGAGATAAACAAACAAACAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGACTCATACTCAGGCACACACAGAGATAAACAAACAAACAATA  100

seq1  AATAAATAAATAAATGGAACTACAATAACATAATAGATTAAAAAGAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATGGAACTACAATAACATAATAGATTAAAAAGAGCTC  150

seq1  CTGTCAGCCAAGCCAAGTTGTTTGGAAATTTACTTATTTGGAAAGCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCCAAGCCAAGTTGTTTGGAAATTTACTTATTTGGAAAGCCAAT  200

seq1  AAAGAAACAGGCATTGGCTCTCAATATTAATTGTTTATTTTCTTCATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAGGCATTGGCTCTCAATATTAATTGTTTATTTTCTTCATCAA  250

seq1  GTCACCAAGAAGAAGTAGAAAGTTTCTCTGGTGAGAGATGGTAGAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAAGAAGAAGTAGAAAGTTTCTCTGGTGAGAGATGGTAGAAAAGT  300

seq1  GCCAA  305
      |||||
seq2  GCCAA  305


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