BAC Information

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BAC

Clone NameB6Ng01-223H22
Chromosome1 (Build37)
Map Location 147,556,376 - 147,557,244
singlet/doubletsinglet
Overlap genenone
Upstream geneRgs18, LOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223H22.bB6Ng01-223H22.g
ACCGA038223GA038224
length1,176452
definitionB6Ng01-223H22.b B6Ng01-223H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattccattttgtagacgtgccacgttttctttagctattcttcaatt
gagggacatgtaggtctttttttttttttttcagtttctggctattaaga
ataaagctattgtgaacatagtagagtacatgttcaaattgatttccaat
gtagttgtataagtttgtactcccaccagcaatggagaagtgttcgcctt
gctccatatcctctccagaatatgctattttcttcagtttttgtcttagc
cattcagaccaatgtaagatggaatctcaaagttgcgttgatttgcattt
ccctgattactaaggactttgaacatttctttaagtgcttctcggccatt
tgagattcatctgttgagaattgtgtttagttctgcactccacttttaat
taggttatttgggttttggtagttaacttcttgagttctttatgaatttt
ggatattagccaactgttagatgtaaggttggtcaaagtccttttggaat
ttgtaagctgctgttttgtcctattgacagtgccctttgccttatagagg
attttcaatttcatagaaaaagaaagtagcttcaacaacttgtgccagtc
taattggatgcctacatgtagaagaatgtaaatagatccacatttgtcac
cctacacaaaactgaagtacaagtggatcaagaacctctctataaacctt
gatacactaaatctcatagaagagaaagtgggaaatagccttgaatgcat
tgttacagttgttacaggagacaatttcatgaaccaatgcctcaggctct
attttgattttcttaacttagggaaatgtagtatgttcactttctgactc
gtgagatcttttataaacactgattttcttttgtattttgtctttttaaa
aattctttactaatcttagatactcatagatatttactgttttctatagc
attcataattattaggtgagttgaaagaaatcccagcacatgatataaac
tattttctatatggacacagtaatgcttaattattgaatttttttgtatg
tcttgccagccaaattatttcaatatatctccatgaccctccatagttaa
taggttcaagttatgttttcccttttgtaggattcaattcctgttcacag
ttgatttcaaatagcatcagtgatct

atttgtctgagaacattctgtggatctagagtctgaaagagttttttttt
ttcattgtatttccattgaattcttttgaggacttgatcaagaacaatga
ccatgattgaacattcactaatatctactctagattgacaattctattat
agtgattgcatatatatatatatatatatatatatatatatatatgtgtg
tgtgtgtgtgtgtgagtgtctatagagagaatatatgtgtgagtgtgcat
gtgtggtttgtgttgttgagcgagcgctcgagcgaaagagatagagacac
aaagaaaaaaaaacacacactatcactctctatctaaagagctcacacac
aaaatcatattgtgtgtttctctctagtgttttatatatatgtagagggg
cgggggcgggcggggggcaccgaccctcgccggcgggaggaaccacaaca
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147556376_147557244
seq2: B6Ng01-223H22.b_346_1218

seq1  TGATTACTAAGGACTTTGAACATTTCTTTAAGTGCTTCTCGGCCATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACTAAGGACTTTGAACATTTCTTTAAGTGCTTCTCGGCCATTTGA  50

seq1  GATTCATCTGTTGAGAATTGTGTTTAGTTCTGCACTCCACTTTTAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCTGTTGAGAATTGTGTTTAGTTCTGCACTCCACTTTTAATTAG  100

seq1  GTTATTTGGGTTTTGGTAGTTAACTTCTTGAGTTCTTTATGAATTTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGGGTTTTGGTAGTTAACTTCTTGAGTTCTTTATGAATTTTGGA  150

seq1  TATTAGCCAACTGTTAGATGTAAGGTTGGTCAAAGTCCTTTTGGAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCAACTGTTAGATGTAAGGTTGGTCAAAGTCCTTTTGGAATTTG  200

seq1  TAAGCTGCTGTTTTGTCCTATTGACAGTGCCCTTTGCCTTATAGAGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCTGTTTTGTCCTATTGACAGTGCCCTTTGCCTTATAGAGGATT  250

seq1  TTCAATTTCATAGAAAAAGAAAGTAGCTTCAACAACTTGTGCCAGTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTCATAGAAAAAGAAAGTAGCTTCAACAACTTGTGCCAGTCTAA  300

seq1  TTGGATGCCTACATGTAGAAGAATGTAAATAGATCCACATTTGTCACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGCCTACATGTAGAAGAATGTAAATAGATCCACATTTGTCACCCT  350

seq1  ACACAAAACTGAAGTACAAGTGGATCAAGAACCTCTCTATAAACCTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACTGAAGTACAAGTGGATCAAGAACCTCTCTATAAACCTTGAT  400

seq1  ACACTAAATCTCATAGAAGAGAAAGTGGGAAATAGCCTTGAATGCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAATCTCATAGAAGAGAAAGTGGGAAATAGCCTTGAATGCATTGT  450

seq1  TACAGTTGTTACAGGAGACAATTTCATGAACCAATGCCTCAGGCTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGTTACAGGAGACAATTTCATGAACCAATGCCTCAGGCTCTATT  500

seq1  TTGATTTTCTTAACTTAGGGAAATGTAGTATGTTCACTTTCTGACTCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTCTTAACTTAGGGAAATGTAGTATGTTCACTTTCTGACTCGTG  550

seq1  AGATCTTTTATAAAACACTGATTT--CTTTGTATTTTGTCTTTTTAAAAA  598
      ||||||||||| ||||||||||||   |||||||||||||||||||||||
seq2  AGATCTTTTAT-AAACACTGATTTTCTTTTGTATTTTGTCTTTTTAAAAA  599

seq1  TTCTTTACTAATCTTAGATACTCATAGATA-TTACTGTTTTCTATAGCAT  647
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTCTTTACTAATCTTAGATACTCATAGATATTTACTGTTTTCTATAGCAT  649

seq1  TCATAATTATTA-GTGAGTTGAAAGAAATCCCAGCACATGATATAAACTA  696
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCATAATTATTAGGTGAGTTGAAAGAAATCCCAGCACATGATATAAACTA  699

seq1  TTTTCTATAATGACAACAGTAATGCTTAATTATTGATTTTTTTTGTATTG  746
      |||||||||  ||| ||||||||||||||||||||| |||||||||||  
seq2  TTTTCTATATGGAC-ACAGTAATGCTTAATTATTGAATTTTTTTGTAT--  746

seq1  TTCTTGCCAG-CAAATTATTTCAATATATCT-CATGACC--TCATAATTT  792
       ||||||||| |||||||||||||||||||| |||||||   |||| || 
seq2  GTCTTGCCAGCCAAATTATTTCAATATATCTCCATGACCCTCCATAGTTA  796

seq1  ATTAGTCCAATTTATGTTT--CCTTTTGTAGAATTCA--TTCTGTTCACA  838
      ||  || ||| ||||||||  |||||||||| |||||  | |||||||||
seq2  ATAGGTTCAAGTTATGTTTTCCCTTTTGTAGGATTCAATTCCTGTTCACA  846

seq1  GTTTGATTTCTATATTAGCATTTAGTGATCT  869
      | ||||||||   | ||||| | ||||||||
seq2  G-TTGATTTC--AAATAGCA-TCAGTGATCT  873


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