BAC Information

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BAC

Clone NameB6Ng01-223P07
Chromosome1 (Build37)
Map Location 65,226,590 - 65,227,547
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1
Downstream genePip5k3, Pthr2, LOC100042716, EG628894, LOC100043165, LOC383520, EG667775, Crygf, LOC667781, EG667786, Mtap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223P07.bB6Ng01-223P07.g
ACCGA038555GA038556
length1,212962
definitionB6Ng01-223P07.b B6Ng01-223P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatacaattgcaatgtactaagtggtatcacctataatcttatc
acacatgaaaactcttacatttttccaactttttattgattctttgtgag
cttcacaccctgcacccttgtcccacttatctccacccttgcaccttccc
cctcaatagaaactaaaaaacacacaaaccaaaagtcaaaacaagaaaca
aaaacaaagcttaggaaaaacaaagcatctcatcatggaaactgaactgt
cacatgtgtcccacactacacccttctgtccacacatcttcccttgcaaa
tgttcattgcaatgagtcattggtctggtttgaggcctctggcttctgag
aacccagcaatattagaccctcactgacacatctggttatcctgttgttg
ccctgtgtcatggagatcctgaagcttgagatcacctggatctacccttt
acacataaatatttttatgcctaacactaaactcaagacatggacaacat
ccatcagtgcaaaggtcctactcatacgtggccatgtttaccctcctctt
ccccagcattcgattacagggcaactgggaatctgttttccatcatacaa
ttttgtcttctatgttattatgtaaaccaattgagactttaaaaaaactg
cagagtccttgaggtacatccaagttgtcacttccatcactaatttgatt
ttttcctattgctgagtaatacccatgagatgttcataccatatatgtat
gtgtatatatatatattcaggtgagttcttacccaataatgtatagtact
tcatattttaaagtatcaatatcatgcagccctggttactaagtattgtg
atgcattttaaagtgagaaaatgggaatattttagctttgttatcactca
aaatagtttcggctatttgtgctgctttgtgaggttatacagatttttag
aatagtttcatccatttcctgttaaaaagatatgtcactgaaaatttcat
aagacttagttaaattctgtagatcaactttggcttattatgggcattta
taatattaaattcattattccatgaatattggctaccttcctactaatat
tgggctactttctaaccttatctgtaactctatttcttccaattagcatt
tatagtcaaggtacagttctttaatctccccagggttaatgttaatccct
cataaattatat
gaattcacggcagttagtaagattcattttggacgctagagggcgctatg
tggaaaaggactcatacgtggtgtcagctgttaatgttgattaactgggt
attagctgtgacctccgtttattcctataaaatgattagagagtgtgtga
gtttatactttcacctctaatctcactttaaatcactttaaaaaacgtta
cttactaccatcaggcacatattgtttatattactaaaagtaagtattca
tagccattcttgttccagaaagcattttagaataaattcaagaaacgaag
aataaaacacaataagaagtattgactataggtgatggcaaaagtaagaa
gaatgcataggaatacagagccatggtgaatttaaatataagcatcttca
accaagttctaaatatgtgctaagcatggattgactatctgagacactga
gataggacatatggcacttatgtgcatgtctccatctggaatcccgtttt
caagggctgatatgtcaagtgcacgagctgatagatcactgaaagagaat
atttgtagatgcttggtattgaattaaattattacaaaataagccaggtg
tagtggtgcatgtttgtattccctacacttgggaggcagaagcaggagga
ttgccacaagatccaggcttagccttgtctacataacgagctccggtctg
gtcaaaccccatttcaaaatcaagaacaaacaatagcctatactcaaata
aatatataggtaaaaccattcatattctcacgcagaaggtctcgtagaat
cgtaaaataataaacttatagactaaatgacttggaaaaatttacaaaca
ttaaaaaatcattattgatgtctaatatgtgagtgtggaaatgtgcatgc
catggcaaggatgtggaagcccaaggacagtcttggagatttgtaggctt
tgggagaccaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_65226590_65227547
seq2: B6Ng01-223P07.g_67_1027

seq1  GAATTCACGGCAGTTAGTAAGATTCATTTTGGACGCTAGAGGGCGCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACGGCAGTTAGTAAGATTCATTTTGGACGCTAGAGGGCGCTATG  50

seq1  TGGAAAAGGACTCATACGTGGTGTCAGCTGTTAATGTTGATTAACTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGGACTCATACGTGGTGTCAGCTGTTAATGTTGATTAACTGGGT  100

seq1  ATTAGCTGTGACCTCCGTTTATTCCTATAAAATGATTAGAGAGTGTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGTGACCTCCGTTTATTCCTATAAAATGATTAGAGAGTGTGTGA  150

seq1  GTTTATACTTTCACCTCTAATCTCACTTTAAATCACTTTAAAAAACGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATACTTTCACCTCTAATCTCACTTTAAATCACTTTAAAAAACGTTA  200

seq1  CTTACTACCATCAGGCACATATTGTTTATATTACTAAAAGTAAGTATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTACCATCAGGCACATATTGTTTATATTACTAAAAGTAAGTATTCA  250

seq1  TAGCCATTCTTGTTCCAGAAAGCATTTTAGAATAAATTCAAGAAACGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTCTTGTTCCAGAAAGCATTTTAGAATAAATTCAAGAAACGAAG  300

seq1  AATAAAACACAATAAGAAGTATTGACTATAGGTGATGGCAAAAGTAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACACAATAAGAAGTATTGACTATAGGTGATGGCAAAAGTAAGAA  350

seq1  GAATGCATAGGAATACAGAGCCATGGTGAATTTAAATATAAGCATCTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATAGGAATACAGAGCCATGGTGAATTTAAATATAAGCATCTTCA  400

seq1  ACCAAGTTCTAAATATGTGCTAAGCATGGATTGACTATCTGAGACACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTCTAAATATGTGCTAAGCATGGATTGACTATCTGAGACACTGA  450

seq1  GATAGGACATATGGCACTTATGTGCATGTCTCCATCTGGAATCCCGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGACATATGGCACTTATGTGCATGTCTCCATCTGGAATCCCGTTTT  500

seq1  CAAGGGCTGATATGTCAAGTGCACGAGCTGATAGATCACTGAAAGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCTGATATGTCAAGTGCACGAGCTGATAGATCACTGAAAGAGAAT  550

seq1  ATTTGTAGATGCTTGGTATTGAATTAAATTATTACAAAATAAGCCAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAGATGCTTGGTATTGAATTAAATTATTACAAAATAAGCCAGGTG  600

seq1  TAGTGGTGCATGTTTGTATTCCCTACACTTGGGAGGCAGAAGCAGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTGCATGTTTGTATTCCCTACACTTGGGAGGCAGAAGCAGGAGGA  650

seq1  TTGCCACAAGATCCAGGC-TAGCCTTGTCTACATAACGAGCTCCGGTCTG  699
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGCCACAAGATCCAGGCTTAGCCTTGTCTACATAACGAGCTCCGGTCTG  700

seq1  GTCAAACCCCATTTCAAAATCAAGAACAAACAATAGCCTATACTCAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACCCCATTTCAAAATCAAGAACAAACAATAGCCTATACTCAAATA  750

seq1  AATATATAGGTAAAACCATTCATATTCTCACGCAGAAGGTCTCGTAGAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATAGGTAAAACCATTCATATTCTCACGCAGAAGGTCTCGTAGAAT  800

seq1  CGTAAAATAATAAACTTATAGACTAAATGAC-TGGAAAAATTACAAAACA  848
      ||||||||||||||||||||||||||||||| ||||||||||   |||||
seq2  CGTAAAATAATAAACTTATAGACTAAATGACTTGGAAAAATTTACAAACA  850

seq1  TTAAAAAAATCATTATTGATGTCTAATATGTGAGTGTGGAAATGTGCATG  898
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-AAAAAATCATTATTGATGTCTAATATGTGAGTGTGGAAATGTGCATG  899

seq1  CCATGGCAAGGATGTGGAAGCCCAAGGACAGTCTT-GAGATTTGTAGGCT  947
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCATGGCAAGGATGTGGAAGCCCAAGGACAGTCTTGGAGATTTGTAGGCT  949

seq1  TT-GGAGACCAA  958
      || |||||||||
seq2  TTGGGAGACCAA  961