BAC Information

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BAC

Clone NameB6Ng01-224J02
Chromosome1 (Build37)
Map Location 151,326,886 - 151,328,055
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224J02.bB6Ng01-224J02.g
ACCGA038991GA038992
length9841,169
definitionB6Ng01-224J02.b B6Ng01-224J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttagctctgtactccactttttaatatggttattttgttct
ctggagtctaacttcttgagttctttggtatgttttggataatagcactc
cattggatatagagttgataaagatcttttcccagcgtgtagtttgctat
tttgtcctattgacagtgtcttttgttttacagaagcctttcaattttat
gatgtcccatttgtcaattgttgatcttagagcctgagccattggtgttt
gatcaggaaattttcccctttgccattgagtttgaggctcttccccactt
tcttttctattagattcagtgtatctggttttatgtggaggtccttgatc
cacttggacttgagctttttacaaggtgataagaatgaatcaatttttat
tcttctacatgcttactgccagttgaaccagcacaatttgttgaaaatgc
tatcttttttcccaccaaatggttttagctcctttgtcaaagatcaagtg
accataggtttgtgggtttatttctaggtgctatctctgtatcaatatca
tgcagtttttaatcacagttgctctgtagtacagattgaagtcagggatg
gtgattctgcagaagttcttttattgttgagaatagcttttgctattctg
ggttttgtgttattccaaatgaatttgagaattgctctttctaactatgt
taagaattgaattggatttttgatggggattgtagtgaatctgtagattg
cttttggtaagatagcaatctacatattcaaatttacaaatatattattt
ttactataataaatcctgcccaatccatgagcatgggagatctttccatc
ttctgaagtcttctttgacttctttcttcagggtgataactcatgtatat
agttgcatatgagaaaattccagaacaaaggaaagagaagactacctgtt
taattatggttgggggataagttttgtccttata

gaattcatgaaattcttggacaaatggatggaactagaaaatatcatcct
gagtgaggtaacccagtcacaaaagaacacatatcatatgtactcactga
taagtgcatattagcccaaacacttggacagacatgttcttgttgcaaat
ataaacttgaagaattttaaaggcctcagagattcagctatttcttcatc
cttaacaaattatagcatctacaatatttccaggcacctggaagtgtcat
aagcatataattttattgtttgaaattagtccacagagccttttgaaacc
tcagcgaactgaaaactgaacagtagtagctcataaatcaactttaaaga
ggtcattgatggcttatcattaaatgatattcagaaagtacaaaacagaa
tgaagggaaatattcatataatgcttagacatatatatgtgtttatttct
gaaaaataaaaaataataaataggttataaaattatggaaaatcgcactt
caagtattgcatatgatttcatatcattatattttatttgcagattttaa
tttatgtgcagctgcattaaaaaacttttagtatttttaactttgaaaga
aaatcttttcataataatttcctacaaagcaaaatttaaatggaaaatac
agaagttttgattatataaaaaatgtgcattaaattatactaaaagtata
ttcaagagaaatcatgagaaatgttagaaaatgtcattagtttttcaaca
atattttaatctatttaactcaatagaacaaactgcgcagttaatatctt
cctcaacggagacccttagcagtattatagaaagtccctcgtgccattta
gatattcatttatgacaggtaattagtcattagttttttatcaaggttga
aagatagacatatataagagtgaagtctgactaaaagccaacttccaggg
tgaaacattaaattatgaaaagtgttaacagcaattaaaagaaaagaccc
ttgtcatgcctcggttcaataaaatgttttatgaaaacagttattggcct
ctgctcaaattactgcaagaaaaaagaaatatgactgtaagtcaggaaga
ttttgactgagtctcatccaacctaaaaatcaaagacttcgagtttgcaa
cctgaaggttattaccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151326886_151328055
seq2: B6Ng01-224J02.g_65_1233

seq1  GAATTCATGAAATTCTTGGACAAATGGATGGAACTAGAAAATATCATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAATTCTTGGACAAATGGATGGAACTAGAAAATATCATCCT  50

seq1  GAGTGAGGTAACCCAGTCACAAAAGAACACATATCATATGTACTCACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGTAACCCAGTCACAAAAGAACACATATCATATGTACTCACTGA  100

seq1  TAAGTGCATATTAGCCCAAACACTTGGACAGACATGTTCTTGTTGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCATATTAGCCCAAACACTTGGACAGACATGTTCTTGTTGCAAAT  150

seq1  ATAAACTTGAAGAATTTTAAAGGCCTCAGAGATTCAGCTATTTCTTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTGAAGAATTTTAAAGGCCTCAGAGATTCAGCTATTTCTTCATC  200

seq1  CTTAACAAATTATAGCATCTACAATATTTCCAGGCACCTGGAAGTGTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAAATTATAGCATCTACAATATTTCCAGGCACCTGGAAGTGTCAT  250

seq1  AAGCATATAATTTTATTGTTTGAAATTAGTCCACAGAGCCTTTTGAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATATAATTTTATTGTTTGAAATTAGTCCACAGAGCCTTTTGAAACC  300

seq1  TCAGCGAACTGAAAACTGAACAGTAGTAGCTCATAAATCAACTTTAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGAACTGAAAACTGAACAGTAGTAGCTCATAAATCAACTTTAAAGA  350

seq1  GGTCATTGATGGCTTATCATTAAATGATATTCAGAAAGTACAAAACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTGATGGCTTATCATTAAATGATATTCAGAAAGTACAAAACAGAA  400

seq1  TGAAGGGAAATATTCATATAATGCTTAGACATATATATGTGTTTATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAAATATTCATATAATGCTTAGACATATATATGTGTTTATTTCT  450

seq1  GAAAAATAAAAAATAATAAATAGGTTATAAAATTATGGAAAATCGCACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAAAAAATAATAAATAGGTTATAAAATTATGGAAAATCGCACTT  500

seq1  CAAGTATTGCATATGATTTCATATCATTATATTTTATTTGCAGATTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTGCATATGATTTCATATCATTATATTTTATTTGCAGATTTTAA  550

seq1  TTTATGTGCAGCTGCATTAAAAAACTTTTAGTATTTTTAACTTTGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTGCAGCTGCATTAAAAAACTTTTAGTATTTTTAACTTTGAAAGA  600

seq1  AAATCTTTTCATAATAATTTCCTACAAAGCAAAATTTAAATGGAAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTCATAATAATTTCCTACAAAGCAAAATTTAAATGGAAAATAC  650

seq1  AGAAGTTTTGATTATATAAAAAATGTGCATTAAATTATACTAAAAGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTTGATTATATAAAAAATGTGCATTAAATTATACTAAAAGTATA  700

seq1  TTCAAGAGAAATCATGAGAAATGTTAGAAAATGTCATTAGTTTTTCAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGAAATCATGAGAAATGTTAGAAAATGTCATTAGTTTTTCAACA  750

seq1  ATATTTTAATCTATTTAACTCAATAGAACAAACTGCGCAGTTAATATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAATCTATTTAACTCAATAGAACAAACTGCGCAGTTAATATCTT  800

seq1  CCTCAACGGAGACCCTTAGCAGTATTATAGAAAGTCCCTCGTGCCATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACGGAGACCCTTAGCAGTATTATAGAAAGTCCCTCGTGCCATTTA  850

seq1  GATATTCATTTATGACAGGTAATTAGTCATTAGTTTTTTATCAAGGTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCATTTATGACAGGTAATTAGTCATTAGTTTTTTATCAAGGTTGA  900

seq1  AAGATAGACATATATAAGAGTGAAGTCTGACTAAAAGCCAACTTCCA-GG  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGATAGACATATATAAGAGTGAAGTCTGACTAAAAGCCAACTTCCAGGG  950

seq1  TGAAACATTAAA-TATGAAAAGTGTTAAACAGCAA-TAAAAG-AAAGA-C  995
      |||||||||||| ||||||||||||| |||||||| |||||| ||||| |
seq2  TGAAACATTAAATTATGAAAAGTGTT-AACAGCAATTAAAAGAAAAGACC  999

seq1  CTTGTCATGCCTCGGTTCAATAAAATG-TTTATG-ACACAGTTATTGG-C  1042
      ||||||||||||||||||||||||||| |||||| | ||||||||||| |
seq2  CTTGTCATGCCTCGGTTCAATAAAATGTTTTATGAAAACAGTTATTGGCC  1049

seq1  TCTGCTCAAA-TACTGCAAG--AAAAGAAATATGACTGTAGGTTCAAGAA  1089
      |||||||||| |||||||||  |||||||||||||||||| | ||| |||
seq2  TCTGCTCAAATTACTGCAAGAAAAAAGAAATATGACTGTAAG-TCAGGAA  1098

seq1  GATTTTGACATTGAGTTCTCATCAAAACCTAAAAAATTTCAAAGACTTTC  1139
      |||||||||  |||| |||||||  ||||||||||   |||||||| |||
seq2  GATTTTGAC--TGAG-TCTCATC-CAACCTAAAAA---TCAAAGAC-TTC  1140

seq1  GAGTTTGCAAACTGAAAGTTATATAACCATT  1170
      |||||||||| ||||| ||  ||| ||||||
seq2  GAGTTTGCAACCTGAAGGT--TATTACCATT  1169


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