BAC Information

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BAC

Clone NameB6Ng01-225D09
Chromosome1 (Build37)
Map Location 69,837,157 - 69,986,475
singlet/doubletdoublet
Overlap geneSpag16
Upstream geneErbb4, LOC667842, EG241084, Ikzf2
Downstream geneA830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225D09.bB6Ng01-225D09.g
ACCGA039463GA039464
length1,119994
definitionB6Ng01-225D09.b B6Ng01-225D09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,985,350 - 69,986,475)(69,837,157 - 69,838,149)
sequence
gaattcaccaaagactaagcctgtaaagaaaattgattcctctctcaata
gctgtcagttacccattcctcctcagctaagggtaggactttgagcccag
ctttcagctctatgctgggattttgtgaggcttaaatctgcacaggtttt
gtcacatctgatgtgacttcatttgtgtaacttctgtaccagaaaacact
gtttctttagtagccctacatactgtctgtctcttgaaatctttctgtcc
cctcttttgcaatgatccttgagttgaagaagagggatgacaaatggatg
tccctttaatgggctgaggatgcctcagtctcttattctcttatcccttg
ataagctgtggctctccatgttaatagccatctactgtatatagaaacat
aggcagggttctgatgagggttgagaaatgtattaatctatgggaagaag
aagtcacctaggtagaaatctaaattaggtgaaatattatacaaaactat
tatacttctaagtattagaaggagaaaatactgtacatccaactagttta
aatgaattaaaaattaattaaattgaggccttttcaaacgaccttgttcc
ttgtctctcttccttctgcactgactttgcccctcctgtttctccatttc
tcactttacatcccctgtatcccgctgttcccctctccagacttccacct
agggttcctccatgtggtgtaatcacatctgaagattttgagctagaagc
tccagatgagaaatattagaggcatggcattgttattttttatttaccta
aaatcatacacaataaaaatatatgcaactaaaggagttggagataaaag
agaggcacccaaaccgtgggctgtgttcactcacgaaagagccatgcaca
ggctgcctatccaaaaggaagacagtgatgcaaactgctggggaaagcat
tgctatcaagacaaattgaattgagatttgccctaactcagtcttcaaga
ttctatgagcatgtaaattaaaattctgctactcattctctatattgacc
cacctaataggatctcagctagtcatccccatagactcctgtagcctttc
catacgctagacccagaga

aatgaagtctaggtttcattctttcctttcgcacctctgccataaaatgc
tccttcttgcggcctaagctctttcctgtataatgactttcttttgaatg
atttcagagcttttgctggcgtaagagaacaaagtctttcatagacaacg
ttgagaaaaatctatctcttcgtgattaggataataagcctctgtacttg
attttgatatgtattatacgtctgctgtcgccttatgtgggtagcatggc
ggtggccacgtctgccacaggcaactttccgatctcactgggatgattac
ccgcgtttacattttattacgaattgttgaaatgacctccgggccagctc
ttttgtcattcccaaatccatttgcggctatgttggattctaaaacacac
aacacaacaatgagagcaacaacaacaaaaacttagttggccactttgag
ccgtgctgagtgtctctattgtctgtgttgatgtggctcgtccattagtg
acttaatggattgggagcttgaaaaggtagatgatactgacaggcgcaaa
tggatttctaggcgttcctctaatgttctctcacgggaacaatgaagtat
caaaatcccttcttgtgattttggctttggtcctatcgaagtttgtggtg
ctagaactttttattctttttcggtggcggggatctaggatgttgtcttt
ctaggatggagaggatgaaaccctgcctggataagaaggtaatttgggaa
cagcccacaggaagtgctctggatctgctagacttgcacttttgcttttc
tctcacttagaaaattgacagctgtcattcatttctgtcctgtttacatg
aatgggatggtcttccaggtatctgggactccttttttttttttttttta
atagatattttctctatttacatttcaaatgttatcccattcctagttcc
ccctctgaaaatccccttatccccttccccccttcccctgatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69985350_69986475
seq2: B6Ng01-225D09.b_43_1161 (reverse)

seq1  TCTCTGGGTCTAGCTGTAATGGGAAAGGCTACAGGGAGTCTATGGGGATG  50
      |||||||||||||| |||   |||||||||||| ||||||||||||||||
seq2  TCTCTGGGTCTAGC-GTA--TGGAAAGGCTACA-GGAGTCTATGGGGATG  46

seq1  ACCTTAGCTGAGATTCCTATTA-GTGGGTC-ATATAGAGAATGAAGTAGC  98
      ||  ||||||||| |||||||| ||||||| |||||||||||| ||||| 
seq2  AC--TAGCTGAGA-TCCTATTAGGTGGGTCAATATAGAGAATG-AGTAG-  91

seq1  CAAGATTTTAATTTACATGCTCATAGAATCTTGAAGACTTGAGTTA-GGC  147
      ||  |||||||||||||||||||||||||||||||||| ||||||| |||
seq2  CAGAATTTTAATTTACATGCTCATAGAATCTTGAAGAC-TGAGTTAGGGC  140

seq1  AAATCTCAATTCAATTTGTCTTGATAGCAATGCTTTCCCCAGCAGTTTGC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAATTCAATTTGTCTTGATAGCAATGCTTTCCCCAGCAGTTTGC  190

seq1  ATCACTGTCTTCCTTTTGGATAGGCAGCCTGTGCATGGCTCTTTCGTGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTCTTCCTTTTGGATAGGCAGCCTGTGCATGGCTCTTTCGTGAG  240

seq1  TGAACACAGCCCACGGTTTGGGTGCCTCTCTTTTATCTCCAACTCCTTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACAGCCCACGGTTTGGGTGCCTCTCTTTTATCTCCAACTCCTTTA  290

seq1  GTTGCATATATTTTTATTGTGTATGATTTTAGGTAAATAAAAAATAACAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCATATATTTTTATTGTGTATGATTTTAGGTAAATAAAAAATAACAA  340

seq1  TGCCATGCCTCTAATATTTCTCATCTGGAGCTTCTAGCTCAAAATCTTCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCCTCTAATATTTCTCATCTGGAGCTTCTAGCTCAAAATCTTCA  390

seq1  GATGTGATTACACCACATGGAGGAACCCTAGGTGGAAGTCTGGAGAGGGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGATTACACCACATGGAGGAACCCTAGGTGGAAGTCTGGAGAGGGG  440

seq1  AACAGCGGGATACAGGGGATGTAAAGTGAGAAATGGAGAAACAGGAGGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCGGGATACAGGGGATGTAAAGTGAGAAATGGAGAAACAGGAGGGG  490

seq1  CAAAGTCAGTGCAGAAGGAAGAGAGACAAGGAACAAGGTCGTTTGAAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCAGTGCAGAAGGAAGAGAGACAAGGAACAAGGTCGTTTGAAAAG  540

seq1  GCCTCAATTTAATTAATTTTTAATTCATTTAAACTAGTTGGATGTACAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAATTTAATTAATTTTTAATTCATTTAAACTAGTTGGATGTACAGT  590

seq1  ATTTTCTCCTTCTAATACTTAGAAGTATAATAGTTTTGTATAATATTTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCCTTCTAATACTTAGAAGTATAATAGTTTTGTATAATATTTCA  640

seq1  CCTAATTTAGATTTCTACCTAGGTGACTTCTTCTTCCCATAGATTAATAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTTAGATTTCTACCTAGGTGACTTCTTCTTCCCATAGATTAATAC  690

seq1  ATTTCTCAACCCTCATCAGAACCCTGCCTATGTTTCTATATACAGTAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAACCCTCATCAGAACCCTGCCTATGTTTCTATATACAGTAGAT  740

seq1  GGCTATTAACATGGAGAGCCACAGCTTATCAAGGGATAAGAGAATAAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTAACATGGAGAGCCACAGCTTATCAAGGGATAAGAGAATAAGAG  790

seq1  ACTGAGGCATCCTCAGCCCATTAAAGGGACATCCATTTGTCATCCCTCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCATCCTCAGCCCATTAAAGGGACATCCATTTGTCATCCCTCTT  840

seq1  CTTCAACTCAAGGATCATTGCAAAAGAGGGGACAGAAAGATTTCAAGAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTCAAGGATCATTGCAAAAGAGGGGACAGAAAGATTTCAAGAGA  890

seq1  CAGACAGTATGTAGGGCTACTAAAGAAACAGTGTTTTCTGGTACAGAAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTATGTAGGGCTACTAAAGAAACAGTGTTTTCTGGTACAGAAGT  940

seq1  TACACAAATGAAGTCACATCAGATGTGACAAAACCTGTGCAGATTTAAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAATGAAGTCACATCAGATGTGACAAAACCTGTGCAGATTTAAGC  990

seq1  CTCACAAAATCCCAGCATAGAGCTGAAAGCTGGGCTCAAAGTCCTACCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAAATCCCAGCATAGAGCTGAAAGCTGGGCTCAAAGTCCTACCCT  1040

seq1  TAGCTGAGGAGGAATGGGTAACTGACAGCTATTGAGAGAGGAATCAATTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGGAGGAATGGGTAACTGACAGCTATTGAGAGAGGAATCAATTT  1090

seq1  TCTTTACAGGCTTAGTCTTTGGTGAATTC  1126
      |||||||||||||||||||||||||||||
seq2  TCTTTACAGGCTTAGTCTTTGGTGAATTC  1119


seq1: chr1_69837157_69838149
seq2: B6Ng01-225D09.g_72_1065

seq1  AATGAAGTCTAGGTTTCATTCTTTCCTTTCGCACCTCTGCCATAAAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTCTAGGTTTCATTCTTTCCTTTCGCACCTCTGCCATAAAATGC  50

seq1  TCCTTCTTGCGGCCTAAGCTCTTTCCTGTATAATGACTTTCTTTTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTGCGGCCTAAGCTCTTTCCTGTATAATGACTTTCTTTTGAATG  100

seq1  ATTTCAGAGCTTTTGCTGGCGTAAGAGAACAAAGTCTTTCATAGACAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAGCTTTTGCTGGCGTAAGAGAACAAAGTCTTTCATAGACAACG  150

seq1  TTGAGAAAAATCTATCTCTTCGTGATTAGGATAATAAGCCTCTGTACTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAAAATCTATCTCTTCGTGATTAGGATAATAAGCCTCTGTACTTG  200

seq1  ATTTTGATATGTATTATACGTCTGCTGTCGCCTTATGTGGGTAGCATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATATGTATTATACGTCTGCTGTCGCCTTATGTGGGTAGCATGGC  250

seq1  GGTGGCCACGTCTGCCACAGGCAACTTTCCGATCTCACTGGGATGATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCACGTCTGCCACAGGCAACTTTCCGATCTCACTGGGATGATTAC  300

seq1  CCGCGTTTACATTTTATTACGAATTGTTGAAATGACCTCCGGGCCAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGTTTACATTTTATTACGAATTGTTGAAATGACCTCCGGGCCAGCTC  350

seq1  TTTTGTCATTCCCAAATCCATTTGCGGCTATGTTGGATTCTAAAACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCATTCCCAAATCCATTTGCGGCTATGTTGGATTCTAAAACACAC  400

seq1  AACACAACAATGAGAGCAACAACAACAAAAACTTAGTTGGCCACTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAACAATGAGAGCAACAACAACAAAAACTTAGTTGGCCACTTTGAG  450

seq1  CCGTGCTGAGTGTCTCTATTGTCTGTGTTGATGTGGCTCGTCCATTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCTGAGTGTCTCTATTGTCTGTGTTGATGTGGCTCGTCCATTAGTG  500

seq1  ACTTAATGGATTGGGAGCTTGAAAAGGTAGATGATACTGACAGGCGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATGGATTGGGAGCTTGAAAAGGTAGATGATACTGACAGGCGCAAA  550

seq1  TGGATTTCTAGGCGTTCCTCTAATGTTCTCTCACGGGAACAATGAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTCTAGGCGTTCCTCTAATGTTCTCTCACGGGAACAATGAAGTAT  600

seq1  CAAAATCCCTTCTTGTGATTTTGGCTTTGGTCCTATCGAAGTTTGTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCCTTCTTGTGATTTTGGCTTTGGTCCTATCGAAGTTTGTGGTG  650

seq1  CTAGAACTTTTTATTCTTTTTCGGTGGCGGGGATCTAGGATGTTGTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTTTTTATTCTTTTTCGGTGGCGGGGATCTAGGATGTTGTCTTT  700

seq1  CTAGGATGGAGAGGATGAAACCCTGCCTGGATAAGAAGGTAATTTGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATGGAGAGGATGAAACCCTGCCTGGATAAGAAGGTAATTTGGGAA  750

seq1  CAGCCCACAGGAAGTGCTCTGGATCTGCTAGACTTGCACTTTTGC-TTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGCCCACAGGAAGTGCTCTGGATCTGCTAGACTTGCACTTTTGCTTTTC  800

seq1  TCTCAACTTAGAAAATTGACAGCTGTCATTCATTTCTGTCCTGTTTACAT  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTC-ACTTAGAAAATTGACAGCTGTCATTCATTTCTGTCCTGTTTACAT  849

seq1  GAATGGGATGGTCTTCCAGGTATCTGGGACTCCTTTTTTTTTTTTTTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAATGGGATGGTCTTCCAGGTATCTGGGACTCCTTTTTTTTTTTTTTTTT  899

seq1  ATTAGATATTTTCTCTATTTACATTTCAAATGTTATCCCATTTCCTAGTT  949
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATAGATATTTTCTCTATTTACATTTCAAATGTTATCCCA-TTCCTAGTT  948

seq1  TCCCCTCTGAAAATCCCC-TATCCCC-TCCCCCCTCCCCCTGATCC  993
       ||||||||||||||||| ||||||| |||||||| ||||||||||
seq2  CCCCCTCTGAAAATCCCCTTATCCCCTTCCCCCCTTCCCCTGATCC  994


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