BAC Information

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BAC

Clone NameB6Ng01-225N07
Chromosome1 (Build37)
Map Location 68,092,774 - 68,229,846
singlet/doubletdoublet
Overlap geneErbb4
Upstream geneCps1, Kif22-ps
Downstream geneLOC667842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225N07.bB6Ng01-225N07.g
ACCGA039925GA039926
length1,126168
definitionB6Ng01-225N07.b B6Ng01-225N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,228,714 - 68,229,846)(68,092,774 - 68,092,941)
sequence
gaattctgtgtggaatgaaagcaatattttaagcagaatccaagaaaaat
caaaagaatctaagagaatcgatcaccagtttctaaaaatgtggtttctg
cttctagaaagcgttatgtttggggttattttatagttgcacattgtaaa
tctcaggttcttcacctgtaacaatgtaattctgctacttattaaaggta
cagttgtagacgttaatatacatgtgttagttaatgagtgcaaagtgggt
gtttattgatgcctttacatagtgagaaattcattcatgagctccagact
gggatcgttgatgaaaatgaacaaactggtagagaatagaaagaaaggca
aaacctgcatcaaaaattcacaccaactacaaacgtttgccttgattcca
caagatggaggtgttacaaagagtatcctgcttgctgtgggaaggcagta
ttccacaatgtgtttctgagacttcatcccaatggattgaactcagatat
ccatttttctgagactcagggatggaaagacacagtgggacctgaccaga
atattgagttgcagagtttgtggtccaggagaccatttcatctgctgact
ctcactgccaccttgcactagtcagaccatgaaagcagtgactcttcttc
attccatctggtcacttctttccatctcttctaagtctttctatcgatat
cctgaattttctcccctctctgacacatggggtttaaagtaaggtgtaca
acatcttgaaaacagaagcaaccatatctctttaaggagaagcatattca
caaaggaaagattgagagagttatgttaaatatggcaccaaagcaccaag
caagtgaggatagaaacacttttgttcttaggctgttaggctgtatttat
tctgttattattccagtgcaaaaggaatgtgtgctgtgccaccagaattt
ccactcataatgcttggggttttagggaaatgaccactgaaaatacttat
agaaaagaaaatggaaatttacatatacacacataactgcctttgtatta
taatccttttaacacatgataaaatagaatatagttcactttgacttttc
tgcttcatagcttagttggcctgtac

acaggagaaagaaggaaaagtgttcaaaaataatagtaattacctgtgtt
cctttgacttcttacttggcaaaaatgcctgttctggctaatgctcaatt
tggatcacagctaaagctagagttgattgtgcattttgtgtgtgtgtgtg
tgtgtgtgtgtatgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_68228714_68229846
seq2: B6Ng01-225N07.b_47_1172 (reverse)

seq1  GTACAGGCCAAACCTAAGCTAATGGAAGCAGAAAAGTCAAAGTGACTATT  50
      |||||||||||  ||||||||   |||||||||||||||||||||  | |
seq2  GTACAGGCCAA--CTAAGCTA--TGAAGCAGAAAAGTCAAAGTGA--ACT  44

seq1  ATTTCTTATTTTATCAATGTGT--AAAGGATTATAATACAAAGGCAGTTT  98
      || |  ||||||||| ||||||  |||||||||||||||||||||||  |
seq2  ATATTCTATTTTATC-ATGTGTTAAAAGGATTATAATACAAAGGCAG--T  91

seq1  TATGTGTGTATATGTAAATTTCCCATTTTCTTTTTCTATAGTTATTTTCA  148
      ||||||||||||||||||||| |||||||| |||||||||  ||||||||
seq2  TATGTGTGTATATGTAAATTT-CCATTTTC-TTTTCTATAAGTATTTTCA  139

seq1  GTGGTCATTTCCTTAAAACCCCAAGCATTATGAGTGG-AATTCTGGTGGC  197
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GTGGTCATTTCCCTAAAACCCCAAGCATTATGAGTGGAAATTCTGGTGGC  189

seq1  ACAGCACACATTCCTTTTGCACTGGAATAATAACAGAATAAATACAGCCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACACATTCCTTTTGCACTGGAATAATAACAGAATAAATACAGCCT  239

seq1  AACAGCCTAAGAAC-AAAGTGTTTCTATCCTCACTTGCTTGGTGCTTTGG  296
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AACAGCCTAAGAACAAAAGTGTTTCTATCCTCACTTGCTTGGTGCTTTGG  289

seq1  TGCCATATTTAACATAACTCTCTCAATCTTTCCTTTGTGAATATGCTTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATATTTAACATAACTCTCTCAATCTTTCCTTTGTGAATATGCTTCT  339

seq1  CCTTAAAGAGATATGGTTGCTTCTGTTTTCAAGATGTTGTACACCTTACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAGAGATATGGTTGCTTCTGTTTTCAAGATGTTGTACACCTTACT  389

seq1  TTAAACCCCATGTGTCAGAGAGGGGAGAAAATTCAGGATATCGATAGAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCCCATGTGTCAGAGAGGGGAGAAAATTCAGGATATCGATAGAAA  439

seq1  GACTTAGAAGAGATGGAAAGAAGTGACCAGATGGAATGAAGAAGAGTCAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAGAAGAGATGGAAAGAAGTGACCAGATGGAATGAAGAAGAGTCAC  489

seq1  TGCTTTCATGGTCTGACTAGTGCAAGGTGGCAGTGAGAGTCAGCAGATGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATGGTCTGACTAGTGCAAGGTGGCAGTGAGAGTCAGCAGATGA  539

seq1  AATGGTCTCCTGGACCACAAACTCTGCAACTCAATATTCTGGTCAGGTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTCCTGGACCACAAACTCTGCAACTCAATATTCTGGTCAGGTCC  589

seq1  CACTGTGTCTTTCCATCCCTGAGTCTCAGAAAAATGGATATCTGAGTTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTCTTTCCATCCCTGAGTCTCAGAAAAATGGATATCTGAGTTCA  639

seq1  ATCCATTGGGATGAAGTCTCAGAAACACATTGTGGAATACTGCCTTCCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGGGATGAAGTCTCAGAAACACATTGTGGAATACTGCCTTCCCA  689

seq1  CAGCAAGCAGGATACTCTTTGTAACACCTCCATCTTGTGGAATCAAGGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCAGGATACTCTTTGTAACACCTCCATCTTGTGGAATCAAGGCA  739

seq1  AACGTTTGTAGTTGGTGTGAATTTTTGATGCAGGTTTTGCCTTTCTTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTGTAGTTGGTGTGAATTTTTGATGCAGGTTTTGCCTTTCTTTCT  789

seq1  ATTCTCTACCAGTTTGTTCATTTTCATCAACGATCCCAGTCTGGAGCTCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTACCAGTTTGTTCATTTTCATCAACGATCCCAGTCTGGAGCTCA  839

seq1  TGAATGAATTTCTCACTATGTAAAGGCATCAATAAACACCCACTTTGCAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATTTCTCACTATGTAAAGGCATCAATAAACACCCACTTTGCAC  889

seq1  TCATTAACTAACACATGTATATTAACGTCTACAACTGTACCTTTAATAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAACTAACACATGTATATTAACGTCTACAACTGTACCTTTAATAAG  939

seq1  TAGCAGAATTACATTGTTACAGGTGAAGAACCTGAGATTTACAATGTGCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAATTACATTGTTACAGGTGAAGAACCTGAGATTTACAATGTGCA  989

seq1  ACTATAAAATAACCCCAAACATAACGCTTTCTAGAAGCAGAAACCACATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAAAATAACCCCAAACATAACGCTTTCTAGAAGCAGAAACCACATT  1039

seq1  TTTAGAAACTGGTGATCGATTCTCTTAGATTCTTTTGATTTTTCTTGGAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAACTGGTGATCGATTCTCTTAGATTCTTTTGATTTTTCTTGGAT  1089

seq1  TCTGCTTAAAATATTGCTTTCATTCCACACAGAATTC  1133
      |||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTAAAATATTGCTTTCATTCCACACAGAATTC  1126


seq1: chr1_68092774_68092941
seq2: B6Ng01-225N07.g_71_238

seq1  ACAGGAGAAAGAAGGAAAAGTGTTCAAAAATAATAGTAATTACCTGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAAAGAAGGAAAAGTGTTCAAAAATAATAGTAATTACCTGTGTT  50

seq1  CCTTTGACTTCTTACTTGGCAAAAATGCCTGTTCTGGCTAATGCTCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGACTTCTTACTTGGCAAAAATGCCTGTTCTGGCTAATGCTCAATT  100

seq1  TGGATCACAGCTAAAGCTAGAGTTGATTGTGCATTTTGTGTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACAGCTAAAGCTAGAGTTGATTGTGCATTTTGTGTGTGTGTGTG  150

seq1  TGTGTGTGTGTATGTGTG  168
      ||||||||||||||||||
seq2  TGTGTGTGTGTATGTGTG  168


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