BAC Information

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BAC

Clone NameB6Ng01-226L03
Chromosome1 (Build37)
Map Location 132,309,700 - 132,310,841
singlet/doubletsinglet
Overlap geneDaf2
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneCd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226L03.bB6Ng01-226L03.g
ACCGA040564GA040565
length1,142916
definitionB6Ng01-226L03.b B6Ng01-226L03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaatggtgactgcagatcggtctggtttttttttttttcttt
ctgtgcattttgttgatactaatattaatctactcaacaagggaccagaa
gcaggtggtcattctaaggtcaggtgtctaagggttctggcattgattat
tcaataaagaagaactcatctgtgcacagtgccttgggcacatcaaaagt
aattcagttttctatataccaagttcagagtgagcaccaagtagtgtttg
cactcaggatctggctcaatatcactgtagatagtgtgataaggaaggac
agcagcacacaggtcctaggacaacaggccaggcctgcagctatcaactg
ctctgccagaaccttccatgcatcccgaatcttccagggcttggtgggga
aggtgacttggtttctggtctcagctgctggggtgaggcaatacccacct
gagtgatggaccctgtgctctgggtggtctttcccttaaagctctgctac
agacagtgagaagaataccaaaaatggggcaactgccccaccgtgcccct
cccccatcctactcagggtgtcagcgctgttaataatgagctacatgtca
gagagtacatagtgctgaatgctgatattcattttgaggaaagacacaat
gctatctttttgtttgtttgttgaaacagggtttctatgtgtttccgagg
ttatcctggaatttacttgatagaacttaaactcacctctgcctcctgag
tactgggattaaaggcatgtatcacaactgtccagtttacattgctattt
ttttttaaccaggaaatcttttcatttaacccatgattttacttgtcttg
aaaaccatccaaacagtacagtatgcataaatacataaagatgaaattat
gtgtacacaaagaaatatgagagattacctatacactgggggtggtggac
tgctccattgtcctacatcagacttgcttcacaagtacaattttatggta
gaatttccaaacagggatgaagccttgtcacatgataatgacacctggct
atatttatagaatcgctttccctcgcattattcattgtggattttggtgg
gtcttgaacaaaataattttcttaaaagaatccagtactttc
gaattcctgatttttccaagacttttaacatgaagggatgctgaattttg
tcaaatgcgttttcagcatctaatgaattgatcatgtgattttttttttc
cttgagtttgtttgtgtagtggattacattgatggacttccatgtaatga
aacatccctgcatccctgtgatgaagcctacttgattgtagtgaatgatc
attttgatgtgttcttaaattcggttggctagagttttattgagtatttt
tgcatcaatgttcatacgggagattggtctgaagttctctttctttgttt
ggtcttttgtggtttaggtataagtgtaattgtgacttcatagaatgaat
tgggtagtgttccttctgtttctattttgtgggatagtgtgaagaatatt
ggtattaggtcttctttaaaggtctgatagaattctccactaaacccatc
tggtcctgggcttttttttggttgggagactattaacgactgcttctgtt
tctttaggggttatgggactgtttagatgatttatctaatcctgttttaa
ctttggcaccttgtatgtctagaaaattgtctatttcatccagattttcc
aatttagttgagtataaacttttgtagtaggatttgatgatttttgaatt
tccatggtttccattgttatgtctcccttttcttttttttaaaaacaatt
ttttattagatattttcttcatttctatgtctcccttttcatttctgatt
ttattaatttggatactgtctctatgccctctggttagtctggctagagg
ttatctatcttgtttgattttctcaaagaaccagctcctggttttgttga
ttctttgtatacttctttttgtttctatttgggttggtgtcaaaccttgg
gttttgatttatttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132309700_132310841
seq2: B6Ng01-226L03.b_47_1188

seq1  GAATTCTCCAATGGTGACTGCAGATCGGTCTGGTTTTTTTTTTTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAATGGTGACTGCAGATCGGTCTGGTTTTTTTTTTTTTCTTT  50

seq1  CTGTGCATTTTGTTGATACTAATATTAATCTACTCAACAAGGGACCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCATTTTGTTGATACTAATATTAATCTACTCAACAAGGGACCAGAA  100

seq1  GCAGGTGGTCATTCTAAGGTCAGGTGTCTAAGGGTTCTGGCATTGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGTCATTCTAAGGTCAGGTGTCTAAGGGTTCTGGCATTGATTAT  150

seq1  TCAATAAAGAAGAACTCATCTGTGCACAGTGCCTTGGGCACATCAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAAGAAGAACTCATCTGTGCACAGTGCCTTGGGCACATCAAAAGT  200

seq1  AATTCAGTTTTCTATATACCAAGTTCAGAGTGAGCACCAAGTAGTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGTTTTCTATATACCAAGTTCAGAGTGAGCACCAAGTAGTGTTTG  250

seq1  CACTCAGGATCTGGCTCAATATCACTGTAGATAGTGTGATAAGGAAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGATCTGGCTCAATATCACTGTAGATAGTGTGATAAGGAAGGAC  300

seq1  AGCAGCACACAGGTCCTAGGACAACAGGCCAGGCCTGCAGCTATCAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCACACAGGTCCTAGGACAACAGGCCAGGCCTGCAGCTATCAACTG  350

seq1  CTCTGCCAGAACCTTCCATGCATCCCGAATCTTCCAGGGCTTGGTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCAGAACCTTCCATGCATCCCGAATCTTCCAGGGCTTGGTGGGGA  400

seq1  AGGTGACTTGGTTTCTGGTCTCAGCTGCTGGGGTGAGGCAATACCCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTTGGTTTCTGGTCTCAGCTGCTGGGGTGAGGCAATACCCACCT  450

seq1  GAGTGATGGACCCTGTGCTCTGGGTGGTCTTTCCCTTAAAGCTCTGCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATGGACCCTGTGCTCTGGGTGGTCTTTCCCTTAAAGCTCTGCTAC  500

seq1  AGACAGTGAGAAGAATACCAAAAATGGGGCAACTGCCCCACCGTGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGAGAAGAATACCAAAAATGGGGCAACTGCCCCACCGTGCCCCT  550

seq1  CCCCCATCCTACTCAGGGTGTCAGCGCTGTTAATAATGAGCTACATGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCCTACTCAGGGTGTCAGCGCTGTTAATAATGAGCTACATGTCA  600

seq1  GAGAGTACATAGTGCTGAATGCTGATATTCATTTTGAGGAAAGACACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTACATAGTGCTGAATGCTGATATTCATTTTGAGGAAAGACACAAT  650

seq1  GCTATCTTTTTGTTTGTTTGTTGAAACAGGGTTTCTATGTGTTTCCGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTTTTTGTTTGTTTGTTGAAACAGGGTTTCTATGTGTTTCCGAGG  700

seq1  TTATCCTGGAATTTACTTGATAGAACTTAAACTCACCTCTGCCTCCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGGAATTTACTTGATAGAACTTAAACTCACCTCTGCCTCCTGAG  750

seq1  TACTGGGATTAAAGGCATGTATCACAACTGTCCAGTTTACATTGCTA-TT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TACTGGGATTAAAGGCATGTATCACAACTGTCCAGTTTACATTGCTATTT  800

seq1  TTTTTTAACCAGGAAATCTTTTCATTTAACCCATGATTTTACTTGTCTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAACCAGGAAATCTTTTCATTTAACCCATGATTTTACTTGTCTTG  850

seq1  AAAACCATCCAAACAGTACAGTATGCATAAATACATAAAGATGAAATTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATCCAAACAGTACAGTATGCATAAATACATAAAGATGAAATTAT  900

seq1  GTGTACACAAAG-AATATGAGAGATTACCTATACACT-GGGGTGGTGGAC  947
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GTGTACACAAAGAAATATGAGAGATTACCTATACACTGGGGGTGGTGGAC  950

seq1  TGCTCCATTGTCCTACATCAGACTTGC-TCAC-AGTACAA-TATATGGTA  994
      ||||||||||||||||||||||||||| |||| ||||||| | |||||||
seq2  TGCTCCATTGTCCTACATCAGACTTGCTTCACAAGTACAATTTTATGGTA  1000

seq1  GAATTTCCAAACA-GGATGAAGCCTTTGTCACATGAATAAATGACCACCT  1043
      ||||||||||||| |||||||||| |||||||||||   ||||| |||||
seq2  GAATTTCCAAACAGGGATGAAGCC-TTGTCACATGA--TAATGA-CACCT  1046

seq1  GGCTATATTTATAAGAATCGCTTTCCCCTCGCATTATTCCATTGTTGATT  1093
      |||||||||||| ||||||||||| ||||||||||||| |||||| || |
seq2  GGCTATATTTAT-AGAATCGCTTT-CCCTCGCATTATT-CATTGTGGA-T  1092

seq1  TTTGGTGGGTC-TGGACAAAATA--TTTCTTAAAAAGAATCAAAGTACTT  1140
      ||||||||||| || ||||||||  |||||| |||||||||  |||||||
seq2  TTTGGTGGGTCTTGAACAAAATAATTTTCTT-AAAAGAATC-CAGTACTT  1140

seq1  TC  1142
      ||
seq2  TC  1142