BAC Information

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BAC

Clone NameB6Ng01-226L13
Chromosome1 (Build37)
Map Location 150,875,537 - 150,876,233
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226L13.bB6Ng01-226L13.g
ACCGA040582GA040583
length1,164701
definitionB6Ng01-226L13.b B6Ng01-226L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacgtgaggaatactgaatggctgagaagcacctgaaaaaaaa
atgttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctga
aattctacctcacaccagtcagaatagctaagatcaaaaattcaggtgac
agcagatgctggcgaggatgtggagaaagaggtacactcctccattgttg
gtgggatttcaagcttatacaaccactctgtaaatcagtctggcagttcc
tcaaaaaattgaacatagtactacaggaggatcccacagtaactcttctg
ggcatatatccagaagatgttccaaccagtaagaaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgcccctcaacagagtaatggatacagaaaatgtggtacatttgcaca
atagagtactactcagctattaaaaaaatgaatttatgaaattcctaagc
aaatggatggacctggagggcatcatcctgagtgaggtaacccaatcaca
aaagaactcgcacattatgtacttactgataagtggatattagcccagaa
acttaggatactcaagatataagatacaatttgctaaactcatgaaactc
aagaagaacgaagaccaaagtgtggacactttgccccttcgaacaaaaca
cccatggaaggagttacagagacacagtttggagttgagacaaaagcatg
gaccatctagagactgccatatatggggatccatcctatcagcttctaaa
cgctgacaccattgcatatactagcaagattttgctgaaaggacccagac
atggctgtctcttgtgagactatgctggggcctggcaaacacagaagtgg
atgctcacagacagctattggatggatcatctggcctccattggaggagc
tagagaaagtaccccaggagttgaagggtctacaatcctataggtggaac
aacaatatgaactaagcaatactcccctcccctaagctcgtgtctctagc
tgcatatgatcagagatgccatcggtggaaagagagcccaatgtgtgtaa
acctttatatgctcagtacagggaacgccaggcaagaactgcaagtgctt
gcttaaggcagctg
gaattcaatttcacacttaaccaatacagaactccacggacctcattgca
tgcatgaagctgcactgtgcccacagaacactgattcaggctcaggactc
cttttcccatttgctttctgcatccgttatgaagacgtctgccaagtacc
cacatatgaatcacctcatttccttagagtgtcagaaactgactgacatc
caaggccactttagaggagaatggattcttatacatggagtctatacaaa
attttgttacagtagtaatcaatgcattttgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgttaagcatcaagcagaacatgaataaaataattgttt
tctattcatccttacacttctagtatctttttataagctttatctggcac
aaactgaagtcaggctagaaacaacccatgtggtgttagcacactcacaa
acatctccatgtgtttaagtacagtggagtcaagcatacacatctgagaa
gtacaatattttttaattagaagatgaatattcatgaaaaagtatctgta
atccttataaggcataattcatgtttagaaagttttatctgaaataagaa
agatactttgaacctcagtcttccatgccaacaccccgatgagagagaag
aaaggggttctgaggattagtatggggggtgtctgcattgtgatacatgc
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150875537_150876233
seq2: B6Ng01-226L13.g_65_765

seq1  GAATTCAATTTCACACTTAACCAATACAGAACTCCACGGACCTCATTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTCACACTTAACCAATACAGAACTCCACGGACCTCATTGCA  50

seq1  TGCATGAAGCTGCACTGTGCCCACAGAACACTGATTCAGGCTCAGGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAGCTGCACTGTGCCCACAGAACACTGATTCAGGCTCAGGACTC  100

seq1  CTTTTCCCATTTGCTTTCTGCATCCGTTATGAAGACGTCTGCCAAGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCATTTGCTTTCTGCATCCGTTATGAAGACGTCTGCCAAGTACC  150

seq1  CACATATGAATCACCTCATTTCCTTAGAGTGTCAGAAACTGACTGACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGAATCACCTCATTTCCTTAGAGTGTCAGAAACTGACTGACATC  200

seq1  CAAGGCCACTTTAGAGGAGAATGGATTCTTATACATGGAGTCTATACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCACTTTAGAGGAGAATGGATTCTTATACATGGAGTCTATACAAA  250

seq1  ATTTTGTTACAGTAGTAATCAATGCATTTTGTGTGTGTGTGTGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTACAGTAGTAATCAATGCATTTTGTGTGTGTGTGTGTGTGTGT  300

seq1  GTGTGTGTGTGTGTTAAGCATCAAGCAGAACATGAATAAAATAATTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTAAGCATCAAGCAGAACATGAATAAAATAATTGTTT  350

seq1  TCTATTCATCCTTACACTTCTAGTATCTTTTTATAAGCTTTATCTGGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCATCCTTACACTTCTAGTATCTTTTTATAAGCTTTATCTGGCAC  400

seq1  AAACTGAAGTCAGGCTAGAAACAACCCATGTGGTGTTAGCACACTCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGTCAGGCTAGAAACAACCCATGTGGTGTTAGCACACTCACAA  450

seq1  ACATCTCCATGTGTTTAAGTACAGTGGAGTCAAGCATACACATCTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCCATGTGTTTAAGTACAGTGGAGTCAAGCATACACATCTGAGAA  500

seq1  GTACAATATTTTTTAATTAGAAGATGAATATTCATG-AAAAGTATCTGTA  549
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTACAATATTTTTTAATTAGAAGATGAATATTCATGAAAAAGTATCTGTA  550

seq1  ATCCTTATAAGGCATAATTCATGTTTAGAAAGTTTTATCTGAAATAAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATAAGGCATAATTCATGTTTAGAAAGTTTTATCTGAAATAAGAA  600

seq1  AGATACTTTGAACCTCAGTCTTCCATGCCAACA-CCCGATGAGAGAGAAG  648
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGATACTTTGAACCTCAGTCTTCCATGCCAACACCCCGATGAGAGAGAAG  650

seq1  AAAGGGGTTCTGAGGATTAGTAT-GGGGGTGTCTGCA-TGTGATACATGC  696
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  AAAGGGGTTCTGAGGATTAGTATGGGGGGTGTCTGCATTGTGATACATGC  700

seq1  C  697
      |
seq2  C  701