BAC Information

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BAC

Clone NameB6Ng01-226M18
Chromosome1 (Build37)
Map Location 111,549,080 - 111,549,746
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626474
Downstream geneEG666508, Cdh7, LOC100041429, EG626652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226M18.bB6Ng01-226M18.g
ACCGA040634GA040635
length9741,196
definitionB6Ng01-226M18.b B6Ng01-226M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaccttaaacactctttccaagttacagagaaaaaaactaac
tttaaaagtagttgtactgttttaaagaaataaaatgtagaaatggaaga
tataacattatgagaatgaaggtacttaactttgtattacattaatgtat
gcattcttttttcccacatttttattagatattttcttctgttacatttc
aaatgctatcccaaaagtcccttataccctcccaccaccctgcttcccta
cccactcactcccacttcttgaccctggttgactggggcatataaagttt
gctagaccaaggggcctctcttcccaatgatggtcgacttggccatcttc
tgctacatgtgcagctagagacacaagctctgggggtactgattatttca
tgttgttgttccatctatagggttgtagacccccttcagcttttgtgtac
tttctctacctcctatattgggggccctgtattccatcctatagatgact
gtgagcatccacttctgtatttgccaggcaatggcaaagcctcacaggag
acagctatgtcagggtcccttcatcaaaaatcttgctggcatatgcaata
gtgtctgtgtttggtggctgattatgggatggaccccctggtggggcagt
ctccggatgatccatcctttcaaaaaaaggccaccaacacattgggaaag
aatttttaccaatcctaaatctgataggggactaatatccaatatataca
aagaactcaagaagctgaactccagaaattcaaataaccccattgaaatg
gggtacagagctaaacaaagaattctcaactgaggaataccaaagggctg
agaagcacttgaaaaaatgttcaatatccttaatcatcagtaaatgcaaa
tcaaaacaaccaagagattccacctcacaacagtcagaatgctaggatca
aaaattcaagtgacagcagatgct

gaattctcacctgaggaataccgaatggctgagaagcacgtgaaaaaaaa
tattcaacatgcttaatcatcaaggaaatgcaaatcaaaacaaccctgag
attccatctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
ccagatgctggtgaggatgtggagaaagaggaacactcctccattgttgg
tgggattgcaagcttgtacaaccactctgaaaatcagtctggcagttcct
cagaaaattgaacatagtactactagaggatcccataatacctctcctgg
gcatatatccagaagatgttccaaccggtaagaagaacacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaactcag
atgcccctcaacagaggaatggatatagaaaatatgatacatttacacaa
tggagtactaatcagctattaaaaagaatgaatttatgaaattcctagcc
aaatggatggacctggagggcatcattctgaatgaggtaacccaatcaca
aaagaacttgcacaatatgtagtcagtaataagtggatattagcccagaa
acttagaatacctaagatataagatagaatttgctaaacacatgaaactc
aagaagaatgaagaccaaagtgtggacactttgccccttctcataattgg
gaacaaaacaccatggaaggagttacagaggcaaagtttggatctgagat
gaaaggatggaccatctacagactgccatatccagggatccatcccataa
tcagcttccaaacgctgacaccattgcatactctagcaagattttgctga
aaggacccagtcttttgtgagactattcaggggcctagcaaacacagaag
tggatgctcacagtcagctattggatggatcacagggcccccaatggagg
agctagaagaaagtaccataggagataaagggatctgcaaccctatatgt
ggaacaacatatggattaacccccccccccccccactgtgctcgtgtctc
tagctacatatgatgagaagatgtttctagtcagccatcagtgaaggaga
ggccatgcatgcaaatttttatatgccctcagttacaaggaaatgcaacg
cctagagatagagattggatggagaagagcctgtgtggggggacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111549080_111549746
seq2: B6Ng01-226M18.b_46_712

seq1  GAATTCAACACCTTAAACACTCTTTCCAAGTTACAGAGAAAAAAACTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACCTTAAACACTCTTTCCAAGTTACAGAGAAAAAAACTAAC  50

seq1  TTTAAAAGTAGTTGTACTGTTTTAAAGAAATAAAATGTAGAAATGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTAGTTGTACTGTTTTAAAGAAATAAAATGTAGAAATGGAAGA  100

seq1  TATAACATTATGAGAATGAAGGTACTTAACTTTGTATTACATTAATGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATTATGAGAATGAAGGTACTTAACTTTGTATTACATTAATGTAT  150

seq1  GCATTCTTTTTTCCCACATTTTTATTAGATATTTTCTTCTGTTACATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTTTTCCCACATTTTTATTAGATATTTTCTTCTGTTACATTTC  200

seq1  AAATGCTATCCCAAAAGTCCCTTATACCCTCCCACCACCCTGCTTCCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATCCCAAAAGTCCCTTATACCCTCCCACCACCCTGCTTCCCTA  250

seq1  CCCACTCACTCCCACTTCTTGACCCTGGTTGACTGGGGCATATAAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCACTCCCACTTCTTGACCCTGGTTGACTGGGGCATATAAAGTTT  300

seq1  GCTAGACCAAGGGGCCTCTCTTCCCAATGATGGTCGACTTGGCCATCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACCAAGGGGCCTCTCTTCCCAATGATGGTCGACTTGGCCATCTTC  350

seq1  TGCTACATGTGCAGCTAGAGACACAAGCTCTGGGGGTACTGATTATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATGTGCAGCTAGAGACACAAGCTCTGGGGGTACTGATTATTTCA  400

seq1  TGTTGTTGTTCCATCTATAGGGTTGTAGACCCCCTTCAGCTTTTGTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTCCATCTATAGGGTTGTAGACCCCCTTCAGCTTTTGTGTAC  450

seq1  TTTCTCTACCTCCTATATTGGGGGCCCTGTATTCCATCCTATAGATGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTACCTCCTATATTGGGGGCCCTGTATTCCATCCTATAGATGACT  500

seq1  GTGAGCATCCACTTCTGTATTTGCCAGGCAATGGCAAAGCCTCACAGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATCCACTTCTGTATTTGCCAGGCAATGGCAAAGCCTCACAGGAG  550

seq1  ACAGCTATGTCAGGGTCCCTTCATCAAAAATCTTGCTGGCATATGCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATGTCAGGGTCCCTTCATCAAAAATCTTGCTGGCATATGCAATA  600

seq1  GTGTCTGTGTTTGGTGGCTGATTATGGGATGGACCCCCTGGTGGGGCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTGTTTGGTGGCTGATTATGGGATGGACCCCCTGGTGGGGCAGT  650

seq1  CTCCGGATGATCCATCC  667
      |||||||||||||||||
seq2  CTCCGGATGATCCATCC  667


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