BAC Information

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BAC

Clone NameB6Ng01-227M18
Chromosome1 (Build37)
Map Location 132,462,228 - 132,463,372
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740, Daf2, Cd55
Downstream geneZp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2, LOC100042826, LOC100042821, 2700049P18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227M18.bB6Ng01-227M18.g
ACCGA041374GA041375
length1,1511,155
definitionB6Ng01-227M18.b B6Ng01-227M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcaactaaggatataggcattactcacaatgtgattcagtgta
gcttgtaaaacaatccatgcaacaaatttttattttcacaaaagaaatag
attctactgtagaactggcttaaccagtatctcatctatctatctatcta
tctatctatctatctatctatctgtctgtctgtcatctgtctgtctatct
atccatccatccatctatatatttacttaatttttaccaaactggaaata
tttagcccattatatttcttattttaagttgactaaaactaagttcaatc
ctatcactatttaaattttaatttgggaaatttttacgtgtttctttaaa
aacgtttatatttttattttatgtgtgagtgcttgtctacatgcatgtat
gtgcaccacattcatgcctagagtccttggaggccattaaagtgtgttgg
atactctggaattatagttctagttgtgagccaccatgtgggagctgaga
actaaatcctggtcctctgcaatagagcaactggtgttcttaacccctga
actatcatctcctcagcctcttgtatatgtttctgagacaaatttttctt
gtgtactgcaagctgttttcaaatataccatgtagcactgacaagcttca
aactgggcagtctgcttgcactggagtcatgggtggaaactctagctaag
gggaatttaatcttacatgattttcatttttgttttagcaagtttagtta
tgaatattgttatgtgaaatgtttacactttctatttggtattaaggtag
atatgaaatacaacacaaaaaagaaaaattgttgacaacattcaggtatc
taaatctgtatcatttatgtattagtattgacaagcagtgatggcatttg
ttggacttaaaagtatcttgaatcagaagctgatgatttgctcaatgatg
gcaacataagactcataagtcagtgtagataaaaagcacagctcttcaac
tcatcctttcttacaaccacaatcattcattggccttttcaaggtaactt
tttattctcataagtcttttggtgctcctcattaacccgagttcactggc
tgaacacggattattttctctgtagttgtagaaaaatatcttttgcataa
a
gaattcagctttctatcttgaaactttaaattattttgcaataatattga
atttataaaaggttgtagaagccaaaacattgatattcaaaatatacaaa
agattcagcccacggttacatatggcctccgtgtgttatctctcgtgtct
ctttcaatatgtgatgatttcttaagactttgtttttcaagaccttgaag
tctatgaagaataatactggctaatgctttgatggactgtctcccactct
gtatttgatgtgttctcatgcttaaggtgatttatttatttatttatttg
tttatttatttatttattttggcaagaataacaaaaatcttaaattttgt
tgatcattgaacatatctgctaagcatttctttgcaaagatactattttc
cttcagtatatctttcatttgtttgtttttaagacagggtctcactaggt
agctctggttggcctgtaacttgctgtgtagaccaggctaatcccaaact
cacagagatctgcctgcttctgcctgcagagtgctaggattaaaggtgtg
caccactatgctgggtttgtaaggtgttctgttgttgttttgttgagaca
tatactgaggttatgccaatatcttattgtatttcctctgtgagtttcag
tgcacattgaaaaatcctacagttttctgaatgatgctctttattgctgg
caatcatcttgcttttatttatcagaattgtagcatgtatctttttcagg
atttagtattaattaatctagttatttatatcagtataggaccattggtg
tttttcttttattccaaggagtacaatccatttattttgttgctcaacat
ttttgtgtttagctaagagaactttgtgttctgctgacattcttccaagg
tgccactgtcattgcttgaatagattctttgggttttttggtaagtaaag
gaagacatttgaagcccattgttattcttcttctgcacttattgtagaac
tctacaaagaagtctcttcttcttggtagggaatggtgttgagaaacctc
acaggttgggttgtagataatgctcatggctattagggattcttttgttc
agatttatcagggagagagtaagggaagaagatgtccaggaatagtgata
actat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132462228_132463372
seq2: B6Ng01-227M18.b_47_1197

seq1  GAATTCATCAACTAAGGATATAGGCATTACTCACAATGTGATTCAGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAACTAAGGATATAGGCATTACTCACAATGTGATTCAGTGTA  50

seq1  GCTTGTAAAACAATCCATGCAACAAATTTTTATTTTCACAAAAGAAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTAAAACAATCCATGCAACAAATTTTTATTTTCACAAAAGAAATAG  100

seq1  ATTCTACTGTAGAACTGGCTTAACCAGTATCTCATCTATCTATCTATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTGTAGAACTGGCTTAACCAGTATCTCATCTATCTATCTATCTA  150

seq1  TCTATCTATCTATCTATCTATCTGTCTGTCTGTCATCTGTCTGTCTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTATCTGTCTGTCTGTCATCTGTCTGTCTATCT  200

seq1  ATCCATCCATCCATCTATATATTTACTTAATTTTTACCAAACTGGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATCCATCTATATATTTACTTAATTTTTACCAAACTGGAAATA  250

seq1  TTTAGCCCATTATATTTCTTATTTTAAGTTGACTAAAACTAAGTTCAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCCCATTATATTTCTTATTTTAAGTTGACTAAAACTAAGTTCAATC  300

seq1  CTATCACTATTTAAATTTTAATTTGGGAAATTTTTACGTGTTTCTTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACTATTTAAATTTTAATTTGGGAAATTTTTACGTGTTTCTTTAAA  350

seq1  AACGTTTATATTTTTATTTTATGTGTGAGTGCTTGTCTACATGCATGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTATATTTTTATTTTATGTGTGAGTGCTTGTCTACATGCATGTAT  400

seq1  GTGCACCACATTCATGCCTAGAGTCCTTGGAGGCCATTAAAGTGTGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACATTCATGCCTAGAGTCCTTGGAGGCCATTAAAGTGTGTTGG  450

seq1  ATACTCTGGAATTATAGTTCTAGTTGTGAGCCACCATGTGGGAGCTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGGAATTATAGTTCTAGTTGTGAGCCACCATGTGGGAGCTGAGA  500

seq1  ACTAAATCCTGGTCCTCTGCAATAGAGCAACTGGTGTTCTTAACCCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATCCTGGTCCTCTGCAATAGAGCAACTGGTGTTCTTAACCCCTGA  550

seq1  ACTATCATCTCCTCAGCCTCTTGTATATGTTTCTGAGACAAATTTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATCTCCTCAGCCTCTTGTATATGTTTCTGAGACAAATTTTTCTT  600

seq1  GTGTACTGCAAGCTGTTTTCAAATATACCATGTAGCACTGACAAGCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGCAAGCTGTTTTCAAATATACCATGTAGCACTGACAAGCTTCA  650

seq1  AACT-GGCAGTCTGCTTGCACTGGAGTCATGGGTGGAAACTCTAGCTAAG  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGCAGTCTGCTTGCACTGGAGTCATGGGTGGAAACTCTAGCTAAG  700

seq1  GGGAATTTAATCTTACATGATTTTCATTTTTGTTTTAGCAAGTTTAGTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTTAATCTTACATGATTTTCATTTTTGTTTTAGCAAGTTTAGTTA  750

seq1  TGAATATTGTTATGTGAAATGTTTACAC-TTCTATTTGGTATTAAGGTAG  798
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGAATATTGTTATGTGAAATGTTTACACTTTCTATTTGGTATTAAGGTAG  800

seq1  ATATGAAATACAACACAAAAAAGAAAAAT--GTGACAACATTCAGGTATC  846
      |||||||||||||||||||||||||||||   ||||||||||||||||||
seq2  ATATGAAATACAACACAAAAAAGAAAAATTGTTGACAACATTCAGGTATC  850

seq1  TAAATCTGTATCATTTATGTATTAGTATTGACAAGCAGTGATGGCA-TTG  895
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAAATCTGTATCATTTATGTATTAGTATTGACAAGCAGTGATGGCATTTG  900

seq1  TTGGACTTAAAAGTATC-TGAATCAGAAAGCTGATGATTTGCTCAATGAT  944
      ||||||||||||||||| |||||||| |||||||||||||||||||||||
seq2  TTGGACTTAAAAGTATCTTGAATCAG-AAGCTGATGATTTGCTCAATGAT  949

seq1  GGCAACATAAGACTCAT-AGTCAGTGTAGATAAAAAGCACAGCTC-TCAA  992
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  GGCAACATAAGACTCATAAGTCAGTGTAGATAAAAAGCACAGCTCTTCAA  999

seq1  CTCATCCCTTCTTACAAACCACAATCAATCCATAGCCTTTTTCATAGGTA  1042
      ||||||| ||||||| |||||||||| || ||| | | |||||| |||||
seq2  CTCATCCTTTCTTAC-AACCACAATC-ATTCATTGGCCTTTTCA-AGGTA  1046

seq1  ACTTTTTA-TCTCAT-AGTCTTTT-GTGCTCTCTCATTAAACCCGAAGTC  1089
      |||||||| |||||| |||||||| |||||| |||||| |||||||  ||
seq2  ACTTTTTATTCTCATAAGTCTTTTGGTGCTC-CTCATT-AACCCGAGTTC  1094

seq1  ACT-GCTGACCACAGAATTATTTCTCTGTAGTTGTAGAAAAATATTTTTG  1138
      ||| ||||| ||| || |  ||||||||||||||||||||||||| ||| 
seq2  ACTGGCTGAACACGGATTATTTTCTCTGTAGTTGTAGAAAAATATCTTTT  1144

seq1  TAATAAA  1145
        |||||
seq2  GCATAAA  1151