BAC Information

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BAC

Clone NameB6Ng01-228D22
Chromosome1 (Build37)
Map Location 67,523,421 - 67,661,241
singlet/doubletdoublet
Overlap geneKif22-ps
Upstream geneC030018G13Rik, Rpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228D22.bB6Ng01-228D22.g
ACCGA041703GA041704
length663387
definitionB6Ng01-228D22.b B6Ng01-228D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,523,421 - 67,524,083)(67,660,849 - 67,661,241)
sequence
gaattccctgtattatagtttttaaaaatcagtgagaactcaacatgtga
tacatattgactgatatttacatttggatttctttatatcgatggggtca
agtgtatttgaataggcacgtgctgacagtaatctacagagccggaagta
atgggatttttatagactgaacgcctttagaaatttcactcactcccaac
cttgatgaactgtcataataattgattgtattaacggaaataaatagcca
aatttgctttgccttcacaatgaccctgttccatctgacatgggtgaggg
ataaggttacttcacactgccccagtcaggtcaaggcgcaggaaaagcct
tggctcgggcctttaattcaatcccgcagacaagaggatgaatcggcgtt
gtcaatgtctctctctttggcgtgggtaccaaataaccttgcttcacttc
cttgtttctcccggagaaggtttttggcagtacattgcttactttccgtt
gcggaagttacacagtttaaagagggaacagtaattacaagccattaaac
tcagaaggccacccgcacaaatgatcattgtgaagaggacacagccttca
agttcagtaaaggatgattaccagagcattttagtggcgcgctggtgaag
ggggtgggggtgg

caggcactttgacttcacatcacttcaatcagaaaagcaaaagtcgaaga
acaaatgctaaggtgttccctccctggaatctgaatttcagcattcataa
ctctgccatgggttgtgtataagcagctttgctgaaggtctgcatctcca
gaaaccctcagggcagcactgaatgacctcaggatcagcctgtgctaaga
gtgattaggagcaagactaaattttcccccaggattactggaatctaaag
ggcagatatttgaaagaaataatctgaagaaaactgtattaagagagttt
tcagatattgggtcataaggaaaagaagtagtgttattagtgttactaag
ttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67523421_67524083
seq2: B6Ng01-228D22.b_47_709

seq1  GAATTCCCTGTATTATAGTTTTTAAAAATCAGTGAGAACTCAACATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTATTATAGTTTTTAAAAATCAGTGAGAACTCAACATGTGA  50

seq1  TACATATTGACTGATATTTACATTTGGATTTCTTTATATCGATGGGGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTGACTGATATTTACATTTGGATTTCTTTATATCGATGGGGTCA  100

seq1  AGTGTATTTGAATAGGCACGTGCTGACAGTAATCTACAGAGCCGGAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTGAATAGGCACGTGCTGACAGTAATCTACAGAGCCGGAAGTA  150

seq1  ATGGGATTTTTATAGACTGAACGCCTTTAGAAATTTCACTCACTCCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTTTTATAGACTGAACGCCTTTAGAAATTTCACTCACTCCCAAC  200

seq1  CTTGATGAACTGTCATAATAATTGATTGTATTAACGGAAATAAATAGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGAACTGTCATAATAATTGATTGTATTAACGGAAATAAATAGCCA  250

seq1  AATTTGCTTTGCCTTCACAATGACCCTGTTCCATCTGACATGGGTGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTTTGCCTTCACAATGACCCTGTTCCATCTGACATGGGTGAGGG  300

seq1  ATAAGGTTACTTCACACTGCCCCAGTCAGGTCAAGGCGCAGGAAAAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTTACTTCACACTGCCCCAGTCAGGTCAAGGCGCAGGAAAAGCCT  350

seq1  TGGCTCGGGCCTTTAATTCAATCCCGCAGACAAGAGGATGAATCGGCGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGGGCCTTTAATTCAATCCCGCAGACAAGAGGATGAATCGGCGTT  400

seq1  GTCAATGTCTCTCTCTTTGGCGTGGGTACCAAATAACCTTGCTTCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTCTCTCTCTTTGGCGTGGGTACCAAATAACCTTGCTTCACTTC  450

seq1  CTTGTTTCTCCCGGAGAAGGTTTTTGGCAGTACATTGCTTACTTTCCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTCCCGGAGAAGGTTTTTGGCAGTACATTGCTTACTTTCCGTT  500

seq1  GCGGAAGTTACACAGTTTAAAGAGGGAACAGTAATTACAAGCCATTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAGTTACACAGTTTAAAGAGGGAACAGTAATTACAAGCCATTAAAC  550

seq1  TCAGAAGGCCACCCGCACAAATGATCATTGTGAAGAGGACACAGCCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGCCACCCGCACAAATGATCATTGTGAAGAGGACACAGCCTTCA  600

seq1  AGTTCAGTAAAGGATGATTACCAGAGCATTTTAGTGGCGCGCTGGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTAAAGGATGATTACCAGAGCATTTTAGTGGCGCGCTGGTGAAG  650

seq1  GGGGTGGGGGTGG  663
      |||||||||||||
seq2  GGGGTGGGGGTGG  663


seq1: chr1_67660849_67661241
seq2: B6Ng01-228D22.g_68_460 (reverse)

seq1  CACACACACACACACACACACACACACACACACACAACTTAGTAACACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAACTTAGTAACACTA  50

seq1  ATAACACTACTTCTTTTCCTTATGACCCAATATCTGAAAACTCTCTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACTACTTCTTTTCCTTATGACCCAATATCTGAAAACTCTCTTAAT  100

seq1  ACAGTTTTCTTCAGATTATTTCTTTCAAATATCTGCCCTTTAGATTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTTCTTCAGATTATTTCTTTCAAATATCTGCCCTTTAGATTCCAG  150

seq1  TAATCCTGGGGGAAAATTTAGTCTTGCTCCTAATCACTCTTAGCACAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTGGGGGAAAATTTAGTCTTGCTCCTAATCACTCTTAGCACAGGC  200

seq1  TGATCCTGAGGTCATTCAGTGCTGCCCTGAGGGTTTCTGGAGATGCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTGAGGTCATTCAGTGCTGCCCTGAGGGTTTCTGGAGATGCAGAC  250

seq1  CTTCAGCAAAGCTGCTTATACACAACCCATGGCAGAGTTATGAATGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCAAAGCTGCTTATACACAACCCATGGCAGAGTTATGAATGCTGA  300

seq1  AATTCAGATTCCAGGGAGGGAACACCTTAGCATTTGTTCTTCGACTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGATTCCAGGGAGGGAACACCTTAGCATTTGTTCTTCGACTTTTG  350

seq1  CTTTTCTGATTGAAGTGATGTGAAGTCAAAGTGCCTGGAATTC  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGATTGAAGTGATGTGAAGTCAAAGTGCCTGGAATTC  393


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