BAC Information

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BAC

Clone NameB6Ng01-228I01
Chromosome1 (Build37)
Map Location 113,304,394 - 113,305,016
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228I01.bB6Ng01-228I01.g
ACCGA041899GA041900
length1,244873
definitionB6Ng01-228I01.b B6Ng01-228I01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagatctacaaagaagacttgataccaatattcttcaaact
attacataaaactgaaacagaaagaacactaccaaattcattctatgtat
ccacaataactctgatacctaaaccacagaaggacctaaccagaaaagag
aacttcagaccaatcttgcttttgaatattgatgcaaaaataatcaataa
aatcttgtaaaccaaatccaagaacacatcagaaccttcattcaccagga
tcaagtaggcttcattccagggatgcaaggttgtttaatatacaaaaatc
aattaatgtaatatactatatatgcaaactcaaaggaaaaaaaacacata
atcatctccttagctacagaaaaagcatttgacaaaatacagcacccttt
atttttaaaagtacttgagtgatcagcaattcaaagcccacaactaaaca
tgatcaaagcaatatacagcaaaccaactacaaccaaactacagctagta
acacattaaataaaaaaatacatgaagcaatctcaataaaattggggaca
agacaaggatgcccactttccccatatttattcaatatagtacttgaatg
ctagctataacaataagacaacaagaagagatcaaggggatataaattgg
caaagaagaaataaaggtattactatttgaagatgatatgataatatata
taaacaacccccaaaaactctaccagaaacttttctccagccaataaact
acttcagcaaagtggccacatataaacttaactcaaactagtagccaccc
tttatacaaatgataaacaggctgataaagaaattagtaaaacacctccc
cttcacaatacccacaagttgatataaaattatctttgggggtaactcta
acccaaacaagttaaaaattctgtacgaccattaattttcaagtcctctt
taaatagaaactgaagaagatcttaaaaaatggagcaatcctctcatggc
tcatgatttggcagatttaacatagtaaaagttgtccagcttacgaaggc
caattctacaggagtcatcatcagttctccattcaaatcccaataacaat
tctttaaagatgtaggaaggatcaatttctctagttcatttagtatggct
aataaaacggaaggtagataaccggtactaatcattaaaggaatgactgg
ggaggaatccacatcccctggaaatctttcaatctcttcacagt

gaattcctataatccaaatctggtgactttaattactcaagccctttgga
aaaactctttacttagtttgtccatgcctacactctcttgtacttaacct
tttcattccaaattccattgagtggagatttgagcaggtgaggaactggg
agagcaaggaggcacagattagcctgacacagaagaagatctgacctaaa
agcaaacagacatgtgaggatcagatacatttattggagcctatttctac
agaagaccagctgatcgaactagccatgtgagactagatccttgcacttc
ccattcatagctgtccactgtaacctcagcatacaggaaccaaggagcaa
cctgggacagaatccttccagattctttctgagcctggagctgatcctgt
gccacaacattacttacccaaatatgcagggagagagtgggtcttccagg
agtactgacaacctgaccaacatgtctgctcaaatttctggcccaagtgg
gacctgtggtaagccatcaggatacaggaatcaaggaacagctggagaca
ggaatattctggtttccatctgcaatctggagatgatcctgtgccacagc
tctccatacccaaattctttccagagagaactggtctcccagtagttctg
acacacaggcttgcagaatagacaagccacagtcagagacagcaagagca
gctaacaccagagataaccagatgattagaagcaaaggcaagaacataag
ctacagaaaccaaggctactttgccatcatcagaatctagttcttctacc
acagtgagtcatagacaccacaacacacaagaaaagcaagactctgattt
aaaaatcacatctcatgatgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113304394_113305016
seq2: B6Ng01-228I01.g_67_689

seq1  GAATTCCTATAATCCAAATCTGGTGACTTTAATTACTCAAGCCCTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAATCCAAATCTGGTGACTTTAATTACTCAAGCCCTTTGGA  50

seq1  AAAACTCTTTACTTAGTTTGTCCATGCCTACACTCTCTTGTACTTAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTTACTTAGTTTGTCCATGCCTACACTCTCTTGTACTTAACCT  100

seq1  TTTCATTCCAAATTCCATTGAGTGGAGATTTGAGCAGGTGAGGAACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCCAAATTCCATTGAGTGGAGATTTGAGCAGGTGAGGAACTGGG  150

seq1  AGAGCAAGGAGGCACAGATTAGCCTGACACAGAAGAAGATCTGACCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGGAGGCACAGATTAGCCTGACACAGAAGAAGATCTGACCTAAA  200

seq1  AGCAAACAGACATGTGAGGATCAGATACATTTATTGGAGCCTATTTCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACAGACATGTGAGGATCAGATACATTTATTGGAGCCTATTTCTAC  250

seq1  AGAAGACCAGCTGATCGAACTAGCCATGTGAGACTAGATCCTTGCACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACCAGCTGATCGAACTAGCCATGTGAGACTAGATCCTTGCACTTC  300

seq1  CCATTCATAGCTGTCCACTGTAACCTCAGCATACAGGAACCAAGGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATAGCTGTCCACTGTAACCTCAGCATACAGGAACCAAGGAGCAA  350

seq1  CCTGGGACAGAATCCTTCCAGATTCTTTCTGAGCCTGGAGCTGATCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGACAGAATCCTTCCAGATTCTTTCTGAGCCTGGAGCTGATCCTGT  400

seq1  GCCACAACATTACTTACCCAAATATGCAGGGAGAGAGTGGGTCTTCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAACATTACTTACCCAAATATGCAGGGAGAGAGTGGGTCTTCCAGG  450

seq1  AGTACTGACAACCTGACCAACATGTCTGCTCAAATTTCTGGCCCAAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGACAACCTGACCAACATGTCTGCTCAAATTTCTGGCCCAAGTGG  500

seq1  GACCTGTGGTAAGCCATCAGGATACAGGAATCAAGGAACAGCTGGAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTGGTAAGCCATCAGGATACAGGAATCAAGGAACAGCTGGAGACA  550

seq1  GGAATATTCTGGTTTCCATCTGCAATCTGGAGATGATCCTGTGCCACAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTCTGGTTTCCATCTGCAATCTGGAGATGATCCTGTGCCACAGC  600

seq1  TCTCCATACCCAAATTCTTTCCA  623
      |||||||||||||||||||||||
seq2  TCTCCATACCCAAATTCTTTCCA  623


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