BAC Information

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BAC

Clone NameB6Ng01-228J01
Chromosome1 (Build37)
Map Location 11,086,510 - 11,087,429
singlet/doubletsinglet
Overlap genenone
Upstream geneCspp1, Arfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228J01.bB6Ng01-228J01.g
ACCGA041946GA041947
length959739
definitionB6Ng01-228J01.b B6Ng01-228J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactttcagctggtctctacagctagaatatttcagctttaaa
tgtgcctgctttcttttaacccataggtaaattgctgggttttatttaaa
tcaaagtttctatcttttggttttgatacttaatattcaaaacattaagc
atagcctcatatttccataataattactgataggttatatctccaatgtc
aatgaaaagatccatttcaaaatagattagattagattaaaggcaggtta
gttaggaattaggattgaggccaggggaatctccaaggggaagtgggagg
agagaaagagagaaagagcatgagtacagagaaaagagaagaagaagaga
gcaagaaagacaaaaatgtctgggttatataggaaaagcctctgagggaa
tggcagcccagctcctgggctgggagtttaggattgggggcaaggtatgt
caggtaaggattggggaatgctgggagaacctgaaggccagttctgcttt
gatatgtaaaatacatacctcagtcctttgtccaaagtcctttgtccaaa
caactactagtattggtcttatagtctactacaaatagagttaaacaaaa
actcaaatctattttaaaattctaaagtagaaattaataaagaggtgtta
ttatattcacttgcttatctatattccaaacatattttgttttaggaaac
ctctttcttaaaatttctttttatcctgacagaacagaatcaaatggaga
tgttgtaaatctttacacagtttgatcaacactcctgtgctcactgagcc
ccaaattaccatgaacatgaaccttaggtctcaatacagtagcatgattg
cttattacttccttgtgagtatataattccctatttggggattaacccac
agttaaaatagcattttaaagaacagtcattaccttacccagacctcagg
gactttcag

gaattctacctcctttgtgcagagttctcctgtatttctttaagtgagtt
attaatacccttcttaaaatcctctatgagcatcatgagatatgatttta
aatctgaatcttgattttcaggtgtgtagatgtatctaggactcactgtg
gtgggagcactgggttctgatgatgccaagtggtcttggtttctattagc
aagattcttacgtttgccttttgccatctggtaatctgtggtggtagatg
ttctagctgtctctggctggagcttgttcctcctgtgattctttagcctc
tgtcaggcactcctgggattccaactctctcctgagtctcagtggtcaga
gcactctctgcaggcaagctctcctcttgcagggaaggtgcacagaagtc
tggagctcagatccacctcctgagtcctcgggtcaaggccctccctgcca
gccaattctcctctggcagggaaggtgtccaggagtctgggtctcagctc
tgcctcctggctgaggatgaaggtccaaagggaccctgtccaagaagctc
tgttgcttcttctgcccatgtgctctcctgtgtagcctggtgtcagtgat
cccaagatcctgggtgtgctagggcctgtagtgattgtgtccaatatggt
gcggggctggcactgactggaacaaaccccagcttgctggttgggtggtt
ttcctttttcctctgttcaatgttgagcacatagatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11086510_11087429
seq2: B6Ng01-228J01.b_47_969 (reverse)

seq1  TTCTTTAAAATGCTATTTTAACTGT-GGTTATCCCCAAAATAAGGAATTA  49
      ||||||||||||||||||||||||| |||||  ||| ||||| |||||||
seq2  TTCTTTAAAATGCTATTTTAACTGTGGGTTAATCCCCAAATAGGGAATTA  50

seq1  TATACTCACAAGGAAGTAATAAGCAATCATGCTACTGTATTGAGACCT-A  98
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATACTCACAAGGAAGTAATAAGCAATCATGCTACTGTATTGAGACCTAA  100

seq1  GGTTCATGTTCATGGTAATTTGGGGCTCAGTGAGCACAGGAGTGTTGATC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATGTTCATGGTAATTTGGGGCTCAGTGAGCACAGGAGTGTTGATC  150

seq1  AAACTGTGTAAAGATTTACAACATCTCCATTTGATTCTGTTCTGTCAGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGTAAAGATTTACAACATCTCCATTTGATTCTGTTCTGTCAGGA  200

seq1  TAAAAAGAAATTTTAAG-AAGAGGTTTCCTAAAACAAAATATGTTTGGAA  247
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAAAAGAAATTTTAAGAAAGAGGTTTCCTAAAACAAAATATGTTTGGAA  250

seq1  TATAGATAAGCAAGTGAATATAATAACACCTCTTTATTAATTTCTACTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAAGCAAGTGAATATAATAACACCTCTTTATTAATTTCTACTTT  300

seq1  AGAATTTTAAAATAGATTTGAGTTTTTGTTTAACTCTATTTGTAGTAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTAAAATAGATTTGAGTTTTTGTTTAACTCTATTTGTAGTAGAC  350

seq1  TATAAGACCAATACTAGTAGTTGTTTGGACAAAGGACTTTGGACAAAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACCAATACTAGTAGTTGTTTGGACAAAGGACTTTGGACAAAGGA  400

seq1  CTGAGGTATGTATTTTACATATCAAAGCAGAACTGGCCTTCAGGTTCTCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTATGTATTTTACATATCAAAGCAGAACTGGCCTTCAGGTTCTCC  450

seq1  CAGCATTCCCCAATCCTTACCTGACATACCTTGCCCCCAATCCTAAACTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTCCCCAATCCTTACCTGACATACCTTGCCCCCAATCCTAAACTC  500

seq1  CCAGCCCAGGAGCTGGGCTGCCATTCCCTCAGAGGCTTTTCCTATATAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGGAGCTGGGCTGCCATTCCCTCAGAGGCTTTTCCTATATAAC  550

seq1  CCAGACATTTTTGTCTTTCTTGCTCTCTTCTTCTTCTCTTTTCTCTGTAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATTTTTGTCTTTCTTGCTCTCTTCTTCTTCTCTTTTCTCTGTAC  600

seq1  TCATGCTCTTTCTCTCTTTCTCTCCTCCCACTTCCCCTTGGAGATTCCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTCTTTCTCTCTTTCTCTCCTCCCACTTCCCCTTGGAGATTCCCC  650

seq1  TGGCCTCAATCCTAATTCCTAACTAACCTGCCTTTAATCTAATCTAATCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCAATCCTAATTCCTAACTAACCTGCCTTTAATCTAATCTAATCT  700

seq1  ATTTTGAAATGGATCTTTTCATTGACATTGGAGATATAACCTATCAGTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAATGGATCTTTTCATTGACATTGGAGATATAACCTATCAGTAA  750

seq1  TTATTATGGAAATATGAGGCTATGCTTAATGTTTTGAATATTAAGTATCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGGAAATATGAGGCTATGCTTAATGTTTTGAATATTAAGTATCA  800

seq1  AAACCAAAAGATAGAAACTTTGATTTAAATAAAACCCAGCAATTTACCTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAAGATAGAAACTTTGATTTAAATAAAACCCAGCAATTTACCTA  850

seq1  TGGGTTAAAAGAAAGCAGGCACATTTAAAGCTGAAATATTCTAGCTGTAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAAAAGAAAGCAGGCACATTTAAAGCTGAAATATTCTAGCTGTAG  900

seq1  AGACCAGCTGAAAGTTTGAATTC  920
      |||||||||||||||||||||||
seq2  AGACCAGCTGAAAGTTTGAATTC  923


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