BAC Information

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BAC

Clone NameB6Ng01-229D06
Chromosome1 (Build37)
Map Location 149,809,394 - 149,810,610
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229D06.bB6Ng01-229D06.g
ACCGA042418GA042419
length1,206209
definitionB6Ng01-229D06.b B6Ng01-229D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacttaataaagaaaagaatgatttattcattttttcatatta
caatgagatgatagttgactaaattattacatcagttaggacatatgagt
aattacagaaagaggtcaatcatagattatgtgtgcatgtaaatgaatat
ttcataaaatttatttatatgtggcaaattactttgattttggcatagaa
aataatttagttgaaaatgatgttgtattgtttctttctacaaaactgtg
tacataacccatgaatccagttttgcttaatctttgataatttatcagtg
ttttagtatagtgtattctaaagaactttggatggaatttgagataaaca
aaagcaaaactaatcgatatacttgagaaagtaactcattcatattactc
ctaaatggatttgtttgctattttgtcatagatatgtttacatttaaaat
catttttaaagacacaatcacagagttctgattttatcttgacctatttt
cgacacagaacggacttctcaaatattgtgcttgaagctttcatcaggag
gaaaatactttagtccagcttaaaacctaagtcagttcttaaacgtcaga
acttgcatctcttcttaattatactgctaaatgaataaagactacgataa
ttttattgctataaactgatattgaatcatgttacatgtaaaacaatatt
atgcttggaagcaaagaaatcttagaaagtgagcagattataattttata
tatgacaaggtaaaatgcattttatgttaaaataaaatgctaataatcat
tgtaaagattaaaatttaatgtaatgtttatagttattgtaattgtttaa
attaatttcattttgtttagtactggacagcataaatatttacacctatt
tcaaagaccttgtgggaaagttaatattcacagagttttcgcctttaaca
ttataaatgaactttttaagattgggaaactagtgattgattcagagctc
attgtacacattttctttgtggtacatgatatatagatttagcataagaa
aaataaattacctcctgaggcatgatgctgctgagaatgctcaaaataaa
tctggtatttcatttatgttcatggttatggatccaacatttggaaggag
agaacctgagctagctcgattgttttgcctgagctccaatgaaattcagc
aaacca

tctatttccttgtgtgatatgggcctgtttagatagtttacctgctcatg
attgaactgtggtatgtggtatctgtctagaaaacaatccatttcattta
gatttttccagttttgttgagtagagtccaagtgaggatgcctcattccc
agctgggagggagaagaaagcaaccacaagaggggaggtagggaggaatg
tggagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149809394_149810610
seq2: B6Ng01-229D06.b_48_1253 (reverse)

seq1  TGGTTTGCTGAATTTCATTGGAGCTTCAGGCAAAACATATCCGAGCCTTC  50
      |||||||||||||||||||||||| |||||||||||| || ||||    |
seq2  TGGTTTGCTGAATTTCATTGGAGC-TCAGGCAAAACA-AT-CGAG----C  43

seq1  TGCCTCA-GTTCTCTCCTTCCAAATGTTGGAATCATAACCCATGAACATA  99
      |  |||| |||||||||||||||||||||||  ||||| |||||||||||
seq2  TAGCTCAGGTTCTCTCCTTCCAAATGTTGGATCCATAA-CCATGAACATA  92

seq1  AATGAAATACCAGATTTAATTTTGAGCA-TCTCAGCAGCATCATGCCTTC  148
      ||||||||||||||||| |||||||||| |||||||||||||||||| ||
seq2  AATGAAATACCAGATTT-ATTTTGAGCATTCTCAGCAGCATCATGCC-TC  140

seq1  AGGAGGTAATTTA-TTTTCTATGGCTAAATCTATATTATCATGTACCACA  197
      ||||||||||||| ||||||   |||||||||||| ||||||||||||||
seq2  AGGAGGTAATTTATTTTTCTTATGCTAAATCTATA-TATCATGTACCACA  189

seq1  AAGAAAATGTGTTACAATTGAGCTCCTGAATCAATCACTAGTTT-CCAAT  246
      ||||||||||| ||||| |||||| ||||||||||||||||||| |||||
seq2  AAGAAAATGTG-TACAA-TGAGCT-CTGAATCAATCACTAGTTTCCCAAT  236

seq1  CTTAAAAAAGTTCATTTATAATGTTAAAGGCGAAAACTCTGTGAATATTA  296
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTT-AAAAAGTTCATTTATAATGTTAAAGGCGAAAACTCTGTGAATATTA  285

seq1  ACTTTCCCACAAGGTCTTTGAAATAGGTGTAAATATTTATGCTGTCCAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCACAAGGTCTTTGAAATAGGTGTAAATATTTATGCTGTCCAGT  335

seq1  ACTAAACAAAATGAAATTAATTTAAACAATTACAATAACTATAAACATTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAAAATGAAATTAATTTAAACAATTACAATAACTATAAACATTA  385

seq1  CATTAAATTTTAATCTTTACAATGATTATTAGCATTTTATTTTAACATAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATTTTAATCTTTACAATGATTATTAGCATTTTATTTTAACATAA  435

seq1  AATGCATTTTACCTTGTCATATATAAAATTATAATCTGCTCACTTTCTAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTTACCTTGTCATATATAAAATTATAATCTGCTCACTTTCTAA  485

seq1  GATTTCTTTGCTTCCAAGCATAATATTGTTTTACATGTAACATGATTCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTTGCTTCCAAGCATAATATTGTTTTACATGTAACATGATTCAA  535

seq1  TATCAGTTTATAGCAATAAAATTATCGTAGTCTTTATTCATTTAGCAGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTTATAGCAATAAAATTATCGTAGTCTTTATTCATTTAGCAGTA  585

seq1  TAATTAAGAAGAGATGCAAGTTCTGACGTTTAAGAACTGACTTAGGTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAGAAGAGATGCAAGTTCTGACGTTTAAGAACTGACTTAGGTTTT  635

seq1  AAGCTGGACTAAAGTATTTTCCTCCTGATGAAAGCTTCAAGCACAATATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGACTAAAGTATTTTCCTCCTGATGAAAGCTTCAAGCACAATATT  685

seq1  TGAGAAGTCCGTTCTGTGTCGAAAATAGGTCAAGATAAAATCAGAACTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTCCGTTCTGTGTCGAAAATAGGTCAAGATAAAATCAGAACTCT  735

seq1  GTGATTGTGTCTTTAAAAATGATTTTAAATGTAAACATATCTATGACAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGTGTCTTTAAAAATGATTTTAAATGTAAACATATCTATGACAAA  785

seq1  ATAGCAAACAAATCCATTTAGGAGTAATATGAATGAGTTACTTTCTCAAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAACAAATCCATTTAGGAGTAATATGAATGAGTTACTTTCTCAAG  835

seq1  TATATCGATTAGTTTTGCTTTTGTTTATCTCAAATTCCATCCAAAGTTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCGATTAGTTTTGCTTTTGTTTATCTCAAATTCCATCCAAAGTTCT  885

seq1  TTAGAATACACTATACTAAAACACTGATAAATTATCAAAGATTAAGCAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATACACTATACTAAAACACTGATAAATTATCAAAGATTAAGCAAA  935

seq1  ACTGGATTCATGGGTTATGTACACAGTTTTGTAGAAAGAAACAATACAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTCATGGGTTATGTACACAGTTTTGTAGAAAGAAACAATACAAC  985

seq1  ATCATTTTCAACTAAATTATTTTCTATGCCAAAATCAAAGTAATTTGCCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCAACTAAATTATTTTCTATGCCAAAATCAAAGTAATTTGCCA  1035

seq1  CATATAAATAAATTTTATGAAATATTCATTTACATGCACACATAATCTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATAAATTTTATGAAATATTCATTTACATGCACACATAATCTAT  1085

seq1  GATTGACCTCTTTCTGTAATTACTCATATGTCCTAACTGATGTAATAATT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACCTCTTTCTGTAATTACTCATATGTCCTAACTGATGTAATAATT  1135

seq1  TAGTCAACTATCATCTCATTGTAATATGAAAAAATGAATAAATCATTCTT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAACTATCATCTCATTGTAATATGAAAAAATGAATAAATCATTCTT  1185

seq1  TTCTTTATTAAGTTTGAATTC  1217
      |||||||||||||||||||||
seq2  TTCTTTATTAAGTTTGAATTC  1206


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