BAC Information

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BAC

Clone NameB6Ng01-229G15
Chromosome1 (Build37)
Map Location 167,334,219 - 167,335,251
singlet/doubletsinglet
Overlap geneIqwd1
Upstream geneNme7, Atp1b1, LOC100040065, Dpt, Xcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161
Downstream geneBrp44, Sacy, Ppia-ps1-1625, Mpzl1, Rcsd1, Creg1, Cd247, Pou2f1, LOC665409, Dusp27, Gpa33, Mael, LOC100039795, Tada1l, Pogk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229G15.bB6Ng01-229G15.g
ACCGA042569GA042570
length1,2531,030
definitionB6Ng01-229G15.b B6Ng01-229G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatggtcaatgcagtaactgtttcctgaaatctttatagtaaca
gaaaaaagacaattgtaagtcagaagacacttaaaaaatatgtcagcggt
caggtgagcatagtaaagtgggggaaagcgcggtctcaggctgtctctag
gttttaggtgttacctgatcattgttagctttgggttggtggaagctaag
ttaacacatttgaaaaaaaagatttatttattattatatgtaagtacact
gtagctgtcttcacacacaccagaagagggcatcagatcccattaccgaa
ggttgtgagccaccatgtggttgctgggaattgaactcaggatctctagg
aagaacagtcagtgctcttaaccactgcgccatctccccagctcagttaa
tactttctaaaagttttcccctgatagtcacaaggatgttagatcagaaa
agtgtgggcaagggatagctacaaagggagctaaagatagcccaaagtaa
attgtaatcagatgtgggacctgtagtgctccagcccctgcacatcactg
aggatctgatcaggcaaccagcttttgtggcctctttccaggactttctt
cgaatacttgatgctctttggttatttgttcttctcagcttcctctgagt
accctgaatctgtacttagctgatactattttgaaggcaattctgtcatt
atttcaaatatttctgccctttcttacgttagtcttttggtgttttccat
taaacatggatcatgtaccttttgtgtttgtatcacagtccttggatatt
ctagtggcttcccctctcccataccccaaactttgtttcctttgtggttt
taaaggtttctgtatatcccaaagtcatttcttcaactatatcaatatgt
tattgagcctatcaaagccatcttcacttgtgttagtttctttttgatgt
ctagcattactctactgttctttttaagatcaccctgtctgctttagatc
tcctattctcatctatcgtctactttatcagcgcccttagtgtgttgtat
ttcaagttttcttggcctagggattgttccctgcagaagctttcaggtcc
tctcagttcaaggacaccttggtgtccttggtggtagcagttggtcttgg
aggatccaggaacaattgttggaatttttctagtagttctgagctttagc
gtattacagtgaattctcaagccctcttgatgataggtgaatgtgtagag
gac
gaattcctctggaactggagttggtgttaggaaccaaacgtggggctctc
tgtaagagcaaaagtgcttttatgctctgggccatctttccatacctaat
tgtattctcaataatgggtggggtatgtacctgggtacaggtgctctcct
aaggagattccgtatcagatcccctagagtcggatggctaagggccatct
gctgccatggtaagctgtctatcttgagtgctgggaaccaagctctggtt
cctgtaaaagcagcaaattctcttatccacggcaccctctccccagcgcc
tgttatgaattgataaactgtgcaagtatcatcccaatagtctttcttgc
tttctttttgagacgagatctcatgtcatgcatgctggcctcaaacagga
atggccctgaacttctgatcttcctgcctcgagctacagagtactgagat
tacagccacacagcactatgcctacttaccaacaacagcgtagttaaaac
ttagtaacgtacttttcctcttagaataatctatattgacagccagccac
cttccggaccggaggacaggtgcccgcccggctggggaggcggcctaagc
cacagcagcagcggtcgccatcttggtccgggacccgccgaacttaggaa
attagtctgaacaggtgagagggtgcgccagagaacctgacagcttctgg
aacaggcagaagcacagaggcgctgaggcagcaccctgtgtgggccgggg
acagccggccaccttccggaccagaggacaggtgcccgcccagctgggga
ggcggcctaagccacagcagcagcggtcgccatcttggtccgggacccgc
cgaacttaggaaattagtctgaacaggtgagagggtgcgccagagaacct
gacagcctctggaacaggcagaagcacagaggggctgaggcagcaccctg
gtgtgggccggggacagcggcacttccggaccggaggacagtgcccgccc
gggctgggggaggcgactagcaacagcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_167334219_167335251
seq2: B6Ng01-229G15.g_64_1093

seq1  GAATTCCTCTGGAACTGGAGTTGGTGTTAGGAACCAAACGTGGGGCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGGAACTGGAGTTGGTGTTAGGAACCAAACGTGGGGCTCTC  50

seq1  TGTAAGAGCAAAAGTGCTTTTATGCTCTGGGCCATCTTTCCATACCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAGCAAAAGTGCTTTTATGCTCTGGGCCATCTTTCCATACCTAAT  100

seq1  TGTATTCTCAATAATGGGTGGGGTATGTACCTGGGTACAGGTGCTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCTCAATAATGGGTGGGGTATGTACCTGGGTACAGGTGCTCTCCT  150

seq1  AAGGAGATTCCGTATCAGATCCCCTAGAGTCGGATGGCTAAGGGCCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATTCCGTATCAGATCCCCTAGAGTCGGATGGCTAAGGGCCATCT  200

seq1  GCTGCCATGGTAAGCTGTCTATCTTGAGTGCTGGGAACCAAGCTCTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCATGGTAAGCTGTCTATCTTGAGTGCTGGGAACCAAGCTCTGGTT  250

seq1  CCTGTAAAAGCAGCAAATTCTCTTATCCACGGCACCCTCTCCCCAGCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAAAGCAGCAAATTCTCTTATCCACGGCACCCTCTCCCCAGCGCC  300

seq1  TGTTATGAATTGATAAACTGTGCAAGTATCATCCCAATAGTCTTTCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGAATTGATAAACTGTGCAAGTATCATCCCAATAGTCTTTCTTGC  350

seq1  TTTCTTTTTGAGACGAGATCTCATGTCATGCATGCTGGCCTCAAACAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGAGACGAGATCTCATGTCATGCATGCTGGCCTCAAACAGGA  400

seq1  ATGGCCCTGAACTTCTGATCTTCCTGCCTCGAGCTACAGAGTACTGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCTGAACTTCTGATCTTCCTGCCTCGAGCTACAGAGTACTGAGAT  450

seq1  TACAGCCACACAGCACTATGCCTACTTACCAACAACAGCGTAGTTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCACACAGCACTATGCCTACTTACCAACAACAGCGTAGTTAAAAC  500

seq1  TTAGTAACGTACTTTTCCTCTTAGAATAATCTATATTGACAGCCAGCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACGTACTTTTCCTCTTAGAATAATCTATATTGACAGCCAGCCAC  550

seq1  CTTCCGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGC  600

seq1  CACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGCCGAACTTAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGCCGAACTTAGGAA  650

seq1  ATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGG  700

seq1  AACAGGCAGAAGCACAGAGGCGCTGAGGCAGCACCCTGTGTGGGCCGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCAGAAGCACAGAGGCGCTGAGGCAGCACCCTGTGTGGGCCGGGG  750

seq1  ACAGCCGGCCACCTTCCGGACCAGAGGACAGGTGCCCGCCCAGCTGGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGGCCACCTTCCGGACCAGAGGACAGGTGCCCGCCCAGCTGGGGA  800

seq1  GGCGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCGGGACCCGC  850

seq1  CGAACTTAGGAAATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTTAGGAAATTAGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCT  900

seq1  GACAGCCTCTGGAACAGGCAGAAGCACAGAGGGGCTGAGGCAGCACCCT-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACAGCCTCTGGAACAGGCAGAAGCACAGAGGGGCTGAGGCAGCACCCTG  950

seq1  GTGTGGGCCGGGGACAGCCGGCCACCTTCCGGACCGGAGGACAGGTGCCC  999
      ||||||||||||||||| ||||   |||||||||||||||||| ||||||
seq2  GTGTGGGCCGGGGACAG-CGGC--ACTTCCGGACCGGAGGACA-GTGCCC  996

seq1  GCCC-GGCT-GGGGAGGCGACCTAAGCCACAGCAGC  1033
      |||| |||| |||||||||||   ||| ||||||||
seq2  GCCCGGGCTGGGGGAGGCGAC--TAGCAACAGCAGC  1030