BAC Information

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BAC

Clone NameB6Ng01-230E09
Chromosome1 (Build37)
Map Location 148,651,516 - 148,652,637
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230E09.bB6Ng01-230E09.g
ACCGA043179GA043180
length1,111783
definitionB6Ng01-230E09.b B6Ng01-230E09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactgctacatgttgcaacagtgtggaaagatcaacagaaaag
gaggtaccccagtctccatctcatggcccttggagagaaaccttaaataa
aatctcccagttactagcatacatatggttgcacaatgaaagtatgaaaa
cagaatgtaaggatttagagctaccctgcctaaaattcccatctcaagtt
tccagtatgtttttttttaaacaattgaggatgccattgaaattctattt
gagtattttttatagaaaattactatatcaaattcagtgtctgtttagta
ttgaatgcaaaacaagattcttagacaattctcatataaattcttttagg
aaataatgatattttattaaccaaaaattgtctcaagatatcaatattat
tttatactctgacaaaccattttattgtatgatttaaggcaaatatatac
tggccatgttttctgctgtattaactatattgtgaaatacaaaacaatgt
accttctacagatttgtactgcatttttgaaatggatatgaaaatcaagg
tgtctaagtccttcagattgctgaggcttcaactaagaagccttatacaa
gtatttcaggtgtcatcaggttcccaatgatgtatgtgatagtttgtata
tgcttggcccagggagtggcactatttggagttgtggccttattggacta
agtgtgtcactgtgggcatgatcttcattaccctcatcctaactgcctgg
gaggcagtcctttcctagcagcctctagatgaagatgtagaactctcaac
tcctcctgcaccatgcttgcttgcactctgtcatgcttcaaccttggtga
taatggactgaagccccagttaaacgttattctcataagagttgccatgg
tcatgttgtctgttcacagcagtaaaatcaatgtgacttaagaactgctc
tgaatacagaagtggatgctcacagtcatctatggatggaacacagggtc
cctaatgaggagctagagaaagtacccagagctaagggtctacagcccta
ttagagaacaaaatatgactaccagtactttaccccgaccccagctgtgt
ctctaggtgca

gaattcctaaaataatatcagtatttattaagctcttttataatgggact
gcaattagatcattttctgatagtcaaaattgcaataagaactctgtcag
tctcccttgtgtcaccagttaattgtttctacatagtaaccatattttct
actactcagagcacataccaagacattgtaaaaccactaaccaaaggtca
tacaaagggaactaatgatttattataggtactaggacagaaaataaaat
actgactgggttaatctacacaaaacttcactaataacttgctgttatta
ttaaatatatatgataatcattagctattagcccactattttgagcagat
cactgtagagttatagattttaactctcagtgaacttgaagagctgtgac
aggtgataaatgtttaaccagataattactcctaatgatatgtaaacttt
ctctgttgttaacttctatttcaaattatgatttgattttatgtgtgaac
ttttaaatatttgatcatgtatgctcaaagatgtataagtgttgaggact
aagaaaagagtcagaactgagcctgaggacaacttttttcttgttttttt
tttttgtccttccttccttccttccttccttacatccatacatccttcct
tccttccctacttccttctttccctccctccttccttcctttccctcctt
ccttccctcccctccatccgtgttttcccttccctccgtcccttccttcc
ctcctacctaccaacatcctttcatcctatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148651516_148652637
seq2: B6Ng01-230E09.b_44_1154 (reverse)

seq1  TGCAACTAGAGACACAGCTTGGGGTCGGGGTAAGGTACTGGTTAGTTCAT  50
      |||| ||||||||||||| |||||||||||||| ||||||| ||| ||||
seq2  TGCACCTAGAGACACAGC-TGGGGTCGGGGTAAAGTACTGG-TAG-TCAT  47

seq1  ATTTTTGTTCCTCCTATAGGGCTGTAGACCCCTTTAGCTCCTTGGGTACT  100
      | ||||||| |||  ||||||||||||||||  |||||||  ||||||||
seq2  A-TTTTGTT-CTCTAATAGGGCTGTAGACCC--TTAGCTC--TGGGTACT  91

seq1  TTCTCTAGCTCCTTCATTAGGGACCCTGTGTTCCATCCAATAGATGACTG  150
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  TTCTCTAGCTCC-TCATTAGGGACCCTGTGTTCCATCC-ATAGATGACTG  139

seq1  TGAGCATCCACTTCTGTATTCAGAGCAGTTCTTAAGTCACATTGATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATCCACTTCTGTATTCAGAGCAGTTCTTAAGTCACATTGATTTTA  189

seq1  CTGCTGTGAACAGACAACATGACCATGGCAACTCTTATGAGAATAACGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTGAACAGACAACATGACCATGGCAACTCTTATGAGAATAACGTT  239

seq1  TAACTGGGGCTTCAGTCCATTATCACCAAGGTTGAAGCATGACAGAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGGGCTTCAGTCCATTATCACCAAGGTTGAAGCATGACAGAGTGC  289

seq1  AAGCAAGCATGGTGCAGGAGGAGTTGAGAGTTCTACATCTTCATCTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCATGGTGCAGGAGGAGTTGAGAGTTCTACATCTTCATCTAGAG  339

seq1  GCTGCTAGGAAAGGACTGCCTCCCAGGCAGTTAGGATGAGGGTAATGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGGAAAGGACTGCCTCCCAGGCAGTTAGGATGAGGGTAATGAAG  389

seq1  ATCATGCCCACAGTGACACACTTAGTCCAATAAGGCCACAACTCCAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCCCACAGTGACACACTTAGTCCAATAAGGCCACAACTCCAAATA  439

seq1  GTGCCACTCCCTGGGCCAAGCATATACAAACTATCACATACATCATTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCACTCCCTGGGCCAAGCATATACAAACTATCACATACATCATTGGG  489

seq1  AACCTGATGACACCTGAAATACTTGTATAAGGCTTCTTAGTTGAAGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATGACACCTGAAATACTTGTATAAGGCTTCTTAGTTGAAGCCTC  539

seq1  AGCAATCTGAAGGACTTAGACACCTTGATTTTCATATCCATTTCAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATCTGAAGGACTTAGACACCTTGATTTTCATATCCATTTCAAAAAT  589

seq1  GCAGTACAAATCTGTAGAAGGTACATTGTTTTGTATTTCACAATATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACAAATCTGTAGAAGGTACATTGTTTTGTATTTCACAATATAGTT  639

seq1  AATACAGCAGAAAACATGGCCAGTATATATTTGCCTTAAATCATACAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCAGAAAACATGGCCAGTATATATTTGCCTTAAATCATACAATA  689

seq1  AAATGGTTTGTCAGAGTATAAAATAATATTGATATCTTGAGACAATTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTTGTCAGAGTATAAAATAATATTGATATCTTGAGACAATTTTT  739

seq1  GGTTAATAAAATATCATTATTTCCTAAAAGAATTTATATGAGAATTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAATAAAATATCATTATTTCCTAAAAGAATTTATATGAGAATTGTCT  789

seq1  AAGAATCTTGTTTTGCATTCAATACTAAACAGACACTGAATTTGATATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTTGTTTTGCATTCAATACTAAACAGACACTGAATTTGATATAG  839

seq1  TAATTTTCTATAAAAAATACTCAAATAGAATTTCAATGGCATCCTCAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTCTATAAAAAATACTCAAATAGAATTTCAATGGCATCCTCAATT  889

seq1  GTTTAAAAAAAAACATACTGGAAACTTGAGATGGGAATTTTAGGCAGGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAAAAAACATACTGGAAACTTGAGATGGGAATTTTAGGCAGGGT  939

seq1  AGCTCTAAATCCTTACATTCTGTTTTCATACTTTCATTGTGCAACCATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAAATCCTTACATTCTGTTTTCATACTTTCATTGTGCAACCATAT  989

seq1  GTATGCTAGTAACTGGGAGATTTTATTTAAGGTTTCTCTCCAAGGGCCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTAGTAACTGGGAGATTTTATTTAAGGTTTCTCTCCAAGGGCCAT  1039

seq1  GAGATGGAGACTGGGGTACCTCCTTTTCTGTTGATCTTTCCACACTGTTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAGACTGGGGTACCTCCTTTTCTGTTGATCTTTCCACACTGTTG  1089

seq1  CAACATGTAGCAGTTTGAATTC  1122
      ||||||||||||||||||||||
seq2  CAACATGTAGCAGTTTGAATTC  1111


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