BAC Information

Click to search

BAC

Clone NameB6Ng01-231G11
Chromosome1 (Build37)
Map Location 31,071,257 - 31,072,414
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231G11.bB6Ng01-231G11.g
ACCGA044015GA044016
length1,146393
definitionB6Ng01-231G11.b B6Ng01-231G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctacaacaagtgtctttcccctggagatcactgaaaacagta
tgttaagatcccatttccgggattcctatctaattggcctgagcctggca
gtcattgtcttcaccaaataaaaggctaggtgttagtcaatccaaagcac
taatttcttagttccaaaaacatttaccaaaagaagcatttcagggggaa
aatgaaggccatagaagtccttcctggtaactagaacccatgaatatgtg
tgccatgctcagaggactgtcaggtcttgcggtggcttaggactaattgc
aggttacaacaacattttcagatgcaaagactgtcaagtggtgacataaa
cattgcttgttttctgaggggaactttatgtagacttccatcaaataccc
gagtctggatgtgcaaggctcattcaaatggtgtatttgtataaaacctt
ctgagaccatcctgtgtgctctaggtaagttaagcacgcttaaccaaaag
cagatgctttgtaaatagttgctgtgctgatgatttagggaatactgaca
agaaaaatgtttttttatatttctttccagttcccctgcccataactttt
gattggctgaacccatggatgcaggatctttgtatggaaagttgactgta
ttgaaaaaaaatcacaaactgtaaataataactaggcttaccttttctca
cagtggtgttccctttctataaagtgagaattgcttctgagcacttatca
tccctgagattaaaattcagttagctctaatgtcaaagaagtgactataa
atccttcaccttcaagtccaaattaaattatagacgaaatgggaagggtt
catttgtaggagtccatgggatcaggtattttttaacacgataattttaa
tccaatcttttctcataatgcatcctttgtgacattaacaaaatatcctt
aaacctttgtgactggctttcaagtaccagtaaaacagagctgtaacatg
acctatgccccaaataaacacagctatgactttaatgtcaaatgtctgag
agctatcagctcctgatctgatactcgtgggcacagtatgactcattcat
gtgagctatttttatttggatgctttaggacttcattagtttaaaa

ctcttttcatcctgttatcttgaggtagtgtctatctttgatgacgaaac
aacaaaatacagatcctgtttctaaaccaacctgttagtttatggccctg
tacaggggaattgagaactttaatagagttattattgaaagatgtgcatt
aatctctgtcagttgttctgtggtgctttcttagtccttttgactgactt
ttgtagaattgtttattccttgggtctgcctggggctcttatctctctct
tcatactaaagtattccagtttagaggctgacattcccataacatgcttc
tataatgcaatcttttttctccatcagttatatctggtaagtttttttgt
tttgttttattttgttggttttggttttggtggtggtggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31071257_31072414
seq2: B6Ng01-231G11.b_46_1191

seq1  GAATTCCTCTACAACAAGTGTCTTTCCCCTGGAGATCACTGAAAACAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTACAACAAGTGTCTTTCCCCTGGAGATCACTGAAAACAGTA  50

seq1  TGTTAAGATCCCATTTCCGGGATTCCTATCTAATTGGCCTGAGCCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGATCCCATTTCCGGGATTCCTATCTAATTGGCCTGAGCCTGGCA  100

seq1  GTCATTGTCTTCACCAAATAAAAGGCTAGGTGTTAGTCAATCCAAAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTCTTCACCAAATAAAAGGCTAGGTGTTAGTCAATCCAAAGCAC  150

seq1  TAATTTCTTAGTTCCAAAAACATTTACCAAAAGAAGCATTTCAGGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTAGTTCCAAAAACATTTACCAAAAGAAGCATTTCAGGGGGAA  200

seq1  AATGAAGGCCATAGAAGTCCTTCCTGGTAACTAGAACCCATGAATATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGCCATAGAAGTCCTTCCTGGTAACTAGAACCCATGAATATGTG  250

seq1  TGCCATGCTCAGAGGACTGTCAGGTCTTGCGGTGGCTTAGGACTAATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCTCAGAGGACTGTCAGGTCTTGCGGTGGCTTAGGACTAATTGC  300

seq1  AGGTTACAACAACATTTTCAGATGCAAAGACTGTCAAGTGGTGACATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACAACAACATTTTCAGATGCAAAGACTGTCAAGTGGTGACATAAA  350

seq1  CATTGCTTGTTTTCTGAGGGGAACTTTATGTAGACTTCCATCAAATACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTGTTTTCTGAGGGGAACTTTATGTAGACTTCCATCAAATACCC  400

seq1  GAGTCTGGATGTGCAAGGCTCATTCAAATGGTGTATTTGTATAAAACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGGATGTGCAAGGCTCATTCAAATGGTGTATTTGTATAAAACCTT  450

seq1  CTGAGACCATCCTGTGTGCTCTAGGTAAGTTAAGCACGCTTAACCAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCATCCTGTGTGCTCTAGGTAAGTTAAGCACGCTTAACCAAAAG  500

seq1  CAGATGCTTTGTAAATAGTTGCTGTGCTGATGATTTAGGGAATACTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTTTGTAAATAGTTGCTGTGCTGATGATTTAGGGAATACTGACA  550

seq1  AGAAAAATGTTTTTTTATATTTCTTTCCAGTTCCCCTGCCCATAACTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGTTTTTTTATATTTCTTTCCAGTTCCCCTGCCCATAACTTTT  600

seq1  GATTGGCTGAACCCATGGATGCAGGATCTTTGTATGGAAAGTTGACTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCTGAACCCATGGATGCAGGATCTTTGTATGGAAAGTTGACTGTA  650

seq1  TTGAAAAAAAATCACAAACTGTAAATAATAACTAGGCTTACCTTTTCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAATCACAAACTGTAAATAATAACTAGGCTTACCTTTTCTCA  700

seq1  CAGTGGTGTTCCCTTTCTATAAAGTGAGAATTGCTTCTGAGCACTTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTGTTCCCTTTCTATAAAGTGAGAATTGCTTCTGAGCACTTATCA  750

seq1  TCCCTGAGATTAAAATTCAGTTAGCTCTAATGTCAAAGAAGTGACTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGATTAAAATTCAGTTAGCTCTAATGTCAAAGAAGTGACTATAA  800

seq1  ATCCTTCACCTTCAAGTCCAAATTAAATTATAGACGAAATGGGAAGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCACCTTCAAGTCCAAATTAAATTATAGACGAAATGGGAAGGGTT  850

seq1  CATTTGTAGGAGGTCCATGGGATCAGGTATTTTTTAACACGATAATTTTA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAGGA-GTCCATGGGATCAGGTATTTTTTAACACGATAATTTTA  899

seq1  ATCCAATCTTTTCTCATAATGCATCCTTTGTGACATTAACAAAATATCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATCTTTTCTCATAATGCATCCTTTGTGACATTAACAAAATATCCT  949

seq1  TAAACCTTTGTGACTGGCTTTCAAGTACCAGTAAAACAGAGCTGTAACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTTGTGACTGGCTTTCAAGTACCAGTAAAACAGAGCTGTAACAT  999

seq1  GACCTATGCCCCAAATAAACACAGCTATTGACTTTTAATGTCCAAATGTT  1050
      ||||||||||||||||||||||||||| |||| |||||||| |||||| |
seq2  GACCTATGCCCCAAATAAACACAGCTA-TGAC-TTTAATGT-CAAATG-T  1045

seq1  CTGAGAGGCTATCAGCTTCCTGATCCTTGATACTCGTGGGCACAGTTATG  1100
      |||||| ||||||||| ||||||||  |||||||||||||||||| ||||
seq2  CTGAGA-GCTATCAGC-TCCTGATC--TGATACTCGTGGGCACAG-TATG  1090

seq1  ACTCATTCATGTGAGGCTATTTTATTTTGGGGTTGCTTTAGGAC-TCATA  1149
      |||||||||||||| ||||||||  |||  || ||||||||||| |||| 
seq2  ACTCATTCATGTGA-GCTATTTTTATTT--GGATGCTTTAGGACTTCATT  1137

seq1  GTTTTAAAA  1158
        |||||||
seq2  AGTTTAAAA  1146


| Home | SequenceCutter | Blast | Download |