BAC Information

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BAC

Clone NameB6Ng01-231N21
Chromosome1 (Build37)
Map Location 8,622,742 - 8,623,746
singlet/doubletsinglet
Overlap geneSntg1
Upstream geneLOC665069, LOC100039408
Downstream geneLOC100039474, LOC620444, EG665007, LOC665103, LOC100039464, EG620853, LOC665138, Rrs1, Adhfe1, LOC620542, 3110035E14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231N21.bB6Ng01-231N21.g
ACCGA044347GA044348
length1,0551,008
definitionB6Ng01-231N21.b B6Ng01-231N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaaaagaggaaattcaaatgactgagaaatacttaaataagtg
ttcaataaccttaaccatcaatctcctttgagattccattagataactgt
caaaatggctaagttcaataacacaagtgacactcagactggtgaggatt
tggagtaaggcaaaaactcattcattcttggtgtgagtgcaaactgacaa
cttgactatgtaaatcagtgtagcagttcctcagaatgataggaattgac
ttttctcaagatatagctctatcgttctcagccatatacccaaaggtctc
tttataatagccaggaacttgaaatagcctagatgttactcaacagataa
atgggtaaagaaaatgtgttacatgagcacaatatgtaattattgccatt
aaaaataagcaaataaggctggagagatggttcagtggttaagagcacta
gctgttcttccaaaggttctcagttcaattctctactgtctatagtggga
tctgatgataccctctttggtcatgcacacatacaagcaagtagagcact
catatatatgaaatatacaaataaataaatgttttaaaaataatattatg
aaatttgccaaaaaaatcaatagaactagaaaaagtaatcatgaatgagg
tattttagacccagaaatacatctgtggtgtattaacttctatgttatat
gagtttttacgtcaataaccaagttatactctgtagaaccacagagttgt
agctgtgttttggctactttgtgggttcatttaatttacaaattacttca
tcatttttccacccatgcaatcccctaacactaggtaggaggaaaaaaag
tattgacaggtaagtgttgctattgattgatagactagattttgttgatt
agggttctttggaatgaaattgatctttaccataagatatctaattcttc
tcctttgtgcatgcctacttaacaatagaaccacagcaccaccaaaacca
acaacccatgcctcagaccctagtggatagttagatagatagatagatag
ataga

gaattccatgtatcagttcatgagacctgggactcatttaagtcatctgg
ttgtatttttaaatttctcactgttcattctaaatatcatgaattaacag
gtaatacagatactaaagaaacatgtgaattaaatgacattatagaccta
acgtgcctaacaaacatttatgaaacatagaccctactttctttgaaaca
aattatgtaataggacacaacggaagtctgaacaagtataagaatattac
catattatattctttctgaaacatgaaatatatgctggaataataggaca
caaaggaagtcttaacaagtataagaatattacaatattatattctttct
gaaacataaaatatatgctggaatataaatggaaactgacagcaagagaa
gtagaaagcatacatagcctgtggaagttgaatagcagtgcactcttgca
taatgatgccttagatagattgagtaaatacgtttatgagctttattcca
gtggcttacaagctgtggttcaagtagtccaacaatggctcttaatacca
gtgaaggaaacaacttgtcagcatgaatgaggacaaacaggcaaggaaca
agcagttcctttttccatgtcctttatataggctgtcacttgaaaatgtg
gatcttcccaacataaaagatctgaatctaggatgggttctcacacccta
aataattcaaccaagaaaaattccccatgggtgtacccaaccccttgaat
ttttgttaattctagatgttgtttgttcacaagcaataattgccagtgaa
gattaaagtcattggagagatggaaaaatatcattctagaattgaaagag
aatttaatgagaatggcagaatgtcatataaaaacatataagttaatccc
acccttatcagtggaaaaagaggctcattagtcgtgcaaactttatatgc
cctcagtacaggggaacaacagggccaagaagtaggagtgggttgggtgg
gggaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_8622742_8623746
seq2: B6Ng01-231N21.g_69_1076 (reverse)

seq1  AAAGTCCCCCACCC-ACCCACTCCTACTTCTTGGCCCTGTTGTTCCCCTG  49
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAATTCCCCCACCCAACCCACTCCTACTTCTTGGCCCTGTTGTTCCCCTG  50

seq1  TACTGA-GGCATATAAAGTTTGCACGACTAATGGGCCTCTTTTTCCACTG  98
      |||||| |||||||||||||||||||||||||| ||||||||||||||||
seq2  TACTGAGGGCATATAAAGTTTGCACGACTAATGAGCCTCTTTTTCCACTG  100

seq1  ATAA-GGTTGGATTAACTTATATGTTTTTATATGACATTCTGCCATTCTC  147
      |||| ||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTGGGATTAACTTATATGTTTTTATATGACATTCTGCCATTCTC  150

seq1  ATTAAATTCTCTTTCAATTCTAGAATGATATTTTTCCATCTCTCCAATGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTCTCTTTCAATTCTAGAATGATATTTTTCCATCTCTCCAATGA  200

seq1  CTTTAATCTTCACTGGCAATTATTGCTTGTGAACAAACAACATCTAGAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTTCACTGGCAATTATTGCTTGTGAACAAACAACATCTAGAAT  250

seq1  TAACAAAAATTCAAGGGGTTGGGTACACCCATGGGGAATTTTTCTTGGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAAATTCAAGGGGTTGGGTACACCCATGGGGAATTTTTCTTGGTT  300

seq1  GAATTATTTAGGGTGTGAGAACCCATCCTAGATTCAGATCTTTTATGTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTTAGGGTGTGAGAACCCATCCTAGATTCAGATCTTTTATGTTG  350

seq1  GGAAGATCCACATTTTCAAGTGACAGCCTATATAAAGGACATGGAAAAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATCCACATTTTCAAGTGACAGCCTATATAAAGGACATGGAAAAAG  400

seq1  GAACTGCTTGTTCCTTGCCTGTTTGTCCTCATTCATGCTGACAAGTTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTTGTTCCTTGCCTGTTTGTCCTCATTCATGCTGACAAGTTGTT  450

seq1  TCCTTCACTGGTATTAAGAGCCATTGTTGGACTACTTGAACCACAGCTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACTGGTATTAAGAGCCATTGTTGGACTACTTGAACCACAGCTTG  500

seq1  TAAGCCACTGGAATAAAGCTCATAAACGTATTTACTCAATCTATCTAAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACTGGAATAAAGCTCATAAACGTATTTACTCAATCTATCTAAGG  550

seq1  CATCATTATGCAAGAGTGCACTGCTATTCAACTTCCACAGGCTATGTATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTATGCAAGAGTGCACTGCTATTCAACTTCCACAGGCTATGTATG  600

seq1  CTTTCTACTTCTCTTGCTGTCAGTTTCCATTTATATTCCAGCATATATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTACTTCTCTTGCTGTCAGTTTCCATTTATATTCCAGCATATATTT  650

seq1  TATGTTTCAGAAAGAATATAATATTGTAATATTCTTATACTTGTTAAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCAGAAAGAATATAATATTGTAATATTCTTATACTTGTTAAGAC  700

seq1  TTCCTTTGTGTCCTATTATTCCAGCATATATTTCATGTTTCAGAAAGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGTGTCCTATTATTCCAGCATATATTTCATGTTTCAGAAAGAAT  750

seq1  ATAATATGGTAATATTCTTATACTTGTTCAGACTTCCGTTGTGTCCTATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATGGTAATATTCTTATACTTGTTCAGACTTCCGTTGTGTCCTATT  800

seq1  ACATAATTTGTTTCAAAGAAAGTAGGGTCTATGTTTCATAAATGTTTGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTGTTTCAAAGAAAGTAGGGTCTATGTTTCATAAATGTTTGTT  850

seq1  AGGCACGTTAGGTCTATAATGTCATTTAATTCACATGTTTCTTTAGTATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACGTTAGGTCTATAATGTCATTTAATTCACATGTTTCTTTAGTATC  900

seq1  TGTATTACCTGTTAATTCATGATATTTAGAATGAACAGTGAGAAATTTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTACCTGTTAATTCATGATATTTAGAATGAACAGTGAGAAATTTAA  950

seq1  AAATACAACCAGATGACTTAAATGAGTCCCAGGTCTCATGAACTGATACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAACCAGATGACTTAAATGAGTCCCAGGTCTCATGAACTGATACA  1000

seq1  TGGAATTC  1005
      ||||||||
seq2  TGGAATTC  1008


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