BAC Information

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BAC

Clone NameB6Ng01-231O02
Chromosome1 (Build37)
Map Location 106,219,674 - 106,220,848
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC383546, LOC100041134, Cdh20, Rnf152
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231O02.bB6Ng01-231O02.g
ACCGA044357GA044358
length1,161864
definitionB6Ng01-231O02.b B6Ng01-231O02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacatccagatctgcaagcatcaggaagcaagagtaagagtgag
ccactgggtctggcttcagcttcgaaacctcaaaccctatccactatgac
atgcttcctacatatatgccatacatactcccaacaaggctgtccatcta
gtaatgatcggtacacgggccattttcattaaaaataccacaggagaggt
ggatgaggaagacatggagcagttaacagaggagataaacatatacaaac
taaacatagctcatgacactattttatcagagcttataattgtatgtgtt
agaaagatgctcaaaatatgtctgcatgtcacttgtcattaaagtttctt
tacaatatgattgatattatcacagaatctcaaatctcaacagttttcta
gggtgctctgactcagacaatattttaccatcatacttaattctaacata
attctgttagaataataatgttcagtaatagtgctcaaataattatcaaa
tcaataagatgtataaagtaagttttaaaattctcaaaacagccaacttg
actggccagcttttcaattatgtaagtagctagtagtgtctcagatgata
ttcattaggcttgactctaaagaaactaagatagataaaacttcctgcct
caaaatagttcagttaagtccaaagagactatgagtgttcatgtgtgtgg
ttgtgtggattccacagggaacatgtagaggtcagagaataactttagga
attggttcttgccttctcatttgttgtgacagggtatttattagtatatt
tgttatactttgttctcaaggccaactgtctcatcaaggtctgactatgt
ctttttgtgctacttcccatcttgctgtaagaatttgtgaattcttagca
ccctcactggatcaggtttttcttacagtccattgatcaaactcgggtac
ttaggcttgtatgggaactcacagaaccatcttcttagttcaagtataag
tcttatcattgtattatctttgtaatataggaccacattacagtgtgaga
ttactcagatattagatcataattcttcttgggaagactgatgattgctt
agtcaattcctcttgtagaatataattgaacttatttaaagatggcgaaa
actttgaagtc

gaattctcacctgaggaatactgaattgctgagaaacacctgaaaacatg
ttcatcctccttaatcatcagggaaatctaaatcaaaacaactctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggccatggtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactagtaagaaagaaacatactccactat
gttcatagcagccttatttataatagtcagaagctggaaagaacccaaat
gcccctcaacagaggaatggatacaaaaatgtggtacatttacacaatgg
agtactacccagttattaaaaagaatgaatttatgaaattcctagctaaa
tggttggacctggagggcattatcctgagtgaggtaacccaatcacaaaa
caattcaatgtactcactgataagcggatattagcccagaaacttagaat
acccaagatataagttacaatttgcaaaacacatgaaactcaagaagaac
gaagaccaaagtctggacactttgccccttcttagaattgggaacaaaac
acccatggaaggagttacagagacaaagtttggagatgacacaaaaggat
ggaccatttagagactgccatatccagggatccatcccataatcatcctc
caaatgctgataccattgtatacactagcaagattttgctgaaaggaacc
tgaaatagctgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_106219674_106220848
seq2: B6Ng01-231O02.b_47_1207

seq1  GAATTCTACATCCAGATCTGCAAGCATCAGGAAGCAAGAGTAAGAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCCAGATCTGCAAGCATCAGGAAGCAAGAGTAAGAGTGAG  50

seq1  CCACTGGGTCTGGCTTCAGCTTCGAAACCTCAAACCCTATCCACTATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGTCTGGCTTCAGCTTCGAAACCTCAAACCCTATCCACTATGAC  100

seq1  ATGCTTCCTACATATATGCCATACATACTCCCAACAAGGCTGTCCATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCTACATATATGCCATACATACTCCCAACAAGGCTGTCCATCTA  150

seq1  GTAATGATCGGTACACGGGCCATTTTCATTAAAAATACCACAGGAGAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGATCGGTACACGGGCCATTTTCATTAAAAATACCACAGGAGAGGT  200

seq1  GGATGAGGAAGACATGGAGCAGTTAACAGAGGAGATAAACATATACAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGGAAGACATGGAGCAGTTAACAGAGGAGATAAACATATACAAAC  250

seq1  TAAACATAGCTCATGACACTATTTTATCAGAGCTTATAATTGTATGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATAGCTCATGACACTATTTTATCAGAGCTTATAATTGTATGTGTT  300

seq1  AGAAAGATGCTCAAAATATGTCTGCATGTCACTTGTCATTAAAGTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATGCTCAAAATATGTCTGCATGTCACTTGTCATTAAAGTTTCTT  350

seq1  TACAATATGATTGATATTATCACAGAATCTCAAATCTCAACAGTTTTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATGATTGATATTATCACAGAATCTCAAATCTCAACAGTTTTCTA  400

seq1  GGGTGCTCTGACTCAGACAATATTTTACCATCATACTTAATTCTAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTCTGACTCAGACAATATTTTACCATCATACTTAATTCTAACATA  450

seq1  ATTCTGTTAGAATAATAATGTTCAGTAATAGTGCTCAAATAATTATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTAGAATAATAATGTTCAGTAATAGTGCTCAAATAATTATCAAA  500

seq1  TCAATAAGATGTATAAAGTAAGTTTTAAAATTCTCAAAACAGCCAACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGATGTATAAAGTAAGTTTTAAAATTCTCAAAACAGCCAACTTG  550

seq1  ACTGGCCAGCTTTTCAATTATGTAAGTAGCTAGTAGTGTCTCAGATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCAGCTTTTCAATTATGTAAGTAGCTAGTAGTGTCTCAGATGATA  600

seq1  TTCATTAGGCTTGACTCTAAAGAAACTAAGATAGATAAAACTTCCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGGCTTGACTCTAAAGAAACTAAGATAGATAAAACTTCCTGCCT  650

seq1  CAAAATAGTTCAGTTAAGTCCAAAGAGACTATGAGTGTTCATGTGTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAGTTCAGTTAAGTCCAAAGAGACTATGAGTGTTCATGTGTGTGG  700

seq1  TTGTGTGGATTCCACAGGGAACATGTAGAGGTCAGAGAATAACTTTAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGGATTCCACAGGGAACATGTAGAGGTCAGAGAATAACTTTAGGA  750

seq1  ATTGGTTCTTGCCTTCTCATTTGTTGTGACAGGGTATTTATTAGTATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTCTTGCCTTCTCATTTGTTGTGACAGGGTATTTATTAGTATATT  800

seq1  TGTTATACTTTGTTCTCAAGGCCAACTGTCTCATCAAGGTCTGACTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATACTTTGTTCTCAAGGCCAACTGTCTCATCAAGGTCTGACTATGT  850

seq1  CTTTTTGTGCTACTTCCCATCTTGCTGTAAGAATTTGTGAATTCTTAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGCTACTTCCCATCTTGCTGTAAGAATTTGTGAATTCTTAGCA  900

seq1  CCCTCACTGGATCAGGGTTTTTCTTACAGTCCATTGATCAAACTCGGGTA  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCTCACTGGATCA-GGTTTTTCTTACAGTCCATTGATCAAACTCGGGTA  949

seq1  CTTAGGCTTGTATGGGAACTCACAGAACCATCTTCTTAGTTCAAGTATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCTTGTATGGGAACTCACAGAACCATCTTCTTAGTTCAAGTATAA  999

seq1  GTCTTATCATTGTATTATCTATGTAATATAAGGACCACATTACAGTGTGA  1050
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  GTCTTATCATTGTATTATCTTTGTAATAT-AGGACCACATTACAGTGTGA  1048

seq1  AGAATTACTCAGGATATTAAGATCATAAATTCTCTTGGGAAGACTGATGA  1100
         |||||||| |||||| ||||||||| |  ||||||||||||||||||
seq2  --GATTACTCA-GATATT-AGATCATAATTCTTCTTGGGAAGACTGATGA  1094

seq1  TGGTTTAGTCAAATCCTC-TGTAGAATATAATGACTTTTAATTTTAAAGA  1149
      | | |||||||| ||||| |||||||||||||     |||  ||||||||
seq2  TTGCTTAGTCAATTCCTCTTGTAGAATATAATTGAACTTA--TTTAAAGA  1142

seq1  ATGGGCCCAAAAAAACATTTGAAGTC  1175
        | |      ||||| |||||||||
seq2  TGGCG------AAAAC-TTTGAAGTC  1161


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