BAC Information

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BAC

Clone NameB6Ng01-232D23
Chromosome1 (Build37)
Map Location 24,736,574 - 24,737,671
singlet/doubletsinglet
Overlap geneLmbrd1
Upstream geneB3gat2, Smap1, 1110058L19Rik, 4921533L14Rik, LOC665808, Col9a1, Col19a1, LOC100040475, LOC665829
Downstream gene4930472D16Rik, LOC669171, Bai3, LOC665595
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D23.bB6Ng01-232D23.g
ACCGA044633GA044634
length1,2261,057
definitionB6Ng01-232D23.b B6Ng01-232D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaattgggagctgtcacgccatatcaggtgctgaaacgta
acgcttcggattataaaagcagcgccattttcccaatttgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctcaccgaataacccaggaactgtcatcacactggcgcaaggaagatccc
tcgttcgcggggcagaatcagaaccgtgggacaaaaggctctacaaggta
cgtacaatcttgaaatttctccagagttagaagcccttttgattgtttgc
acggcgattacacttttccttttggtttcgttttgtttccaccactggaa
ctgctgactggttcttagtcgcggtcaggcctggacagcgcctggacagc
gatcaatttcagtcgggtcatgcctggacagctgcagtatgggaatctcc
cattctatagtagtggccttatgctaggtcctgaagcagtgtggcctaaa
aatcgccactaagaccttagaaggatttgtcagagagatagaccgtgttg
caccatggtatgcttgctcagggtcattaactgtcgcctcttgggacaaa
ctgaaaggagatctagttagggaacagcagaacggcaaacttaaagcagg
gattatgccgctatggaaattggtgaaatcgtcagcaaatggtagaagcg
gggcagaaagttctggacgaaattcaagaaaggtctatcagaggtagagc
ggggagagagagtaaaagtagagaggaaacaaagtgcactgaagaattta
ggccttttccacgggcctttgagcccgaggaaaagagatataaaggaaag
aatgccttgggagagataagaaaaagggatggaaagggagagaagaggga
gatcgagctggatgaggctcataaggaaatggagcctcttacccgcccac
tggctgaattaaagcagctctttattacctcaaaccagatgaaggaattt
agccgcctctgaagaaactcgaactgaaggagtaattcagttcgttatta
gggagcaaagggtatccagcaagattaaaatgttaagctatctcagtcct
gaaaaggcctaagcggcgtggtcgtaaggccaggcttgactgacttcggg
actcactccacagcaccgtagctctg
gaattcactggctttcccagcccatatgtttagtgaaaaataagcatgtt
accagcaggaacgtagagttggagtatcttgattaatgaaaaagcattta
aagcacagtagttttactgtggatacagtagttttatctaggaggataca
aacaaaataataagtggctttttaagagggggctgatcataagttaggaa
atagagatcttaagcattgaaagagaaaatatgattttataagggaaata
ggacttgggagaggatactgttggaagaaagtgccagtggaaaagtagcc
tttggatagtttgtggccttgaatcaggaacaacccggcagtagagaagt
actgttgcgaggtgcaaaatgtgatttactaaaaattaaacggacagtgg
tggcacacgcctttaatcccagcacttgggagtcagaggcaggtggattt
ctgagttcaaggccagcctggtctacagagtgagttccaggacagccaca
gatacacagagaaactctgtctcaaaaaacaaacaaaacaaaaaacaaca
acaaaaacccccaaacaaacaaaaattactgtcagtctgtttagtgcttg
gcttattagaaaggagctgtattcatgtctgcttttcgtttctgtcttca
agaaagttattttggttgaagtgtgtgtacaaaacctagtcagaaagtag
aggactgtttttggtagctggagatgttctttgtgatttgcaccaaaagc
tagcaacataccagttttcttcaggttctgtggcagtgtgcaatctaaaa
cccgagagcgttgtcttcccttacgttcaaggcccatgagtccgacttaa
gtgctgaggggaagctttttgcctatttctgggctctgtttttgtgatcc
tctgtttgcttacttagggagctagttggtaaactcgcaggttcatctcc
taaatatggaatatactgaattagggcagcatcatatattacactttatt
taaacacagatctggtcagaaattgtcctgagaagtcctaagtattgaaa
agttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_24736574_24737671
seq2: B6Ng01-232D23.g_1_1122

seq1  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN  50
                                                        
seq2  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN  50

seq1  NNNNNNNNNNNNNNNGAATTCACTGGCTTTCCCAGCCCATATGTTTAGTG  100
                     |||||||||||||||||||||||||||||||||||
seq2  NNNNNNNNNNNNNNNGAATTCACTGGCTTTCCCAGCCCATATGTTTAGTG  100

seq1  AAAAATAAGCATGTTACCAGCAGGAACGTAGAGTTGGAGTATCTTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGCATGTTACCAGCAGGAACGTAGAGTTGGAGTATCTTGATTA  150

seq1  ATGAAAAAGCATTTAAAGCACAGTAGTTTTACTGTGGATACAGTAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAGCATTTAAAGCACAGTAGTTTTACTGTGGATACAGTAGTTTT  200

seq1  ATCTAGGAGGATACAAACAAAATAATAAGTGGCTTTTTAAGAGGGGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGGAGGATACAAACAAAATAATAAGTGGCTTTTTAAGAGGGGGCTG  250

seq1  ATCATAAGTTAGGAAATAGAGATCTTAAGCATTGAAAGAGAAAATATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAAGTTAGGAAATAGAGATCTTAAGCATTGAAAGAGAAAATATGAT  300

seq1  TTTATAAGGGAAATAGGACTTGGGAGAGGATACTGTTGGAAGAAAGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGGGAAATAGGACTTGGGAGAGGATACTGTTGGAAGAAAGTGCC  350

seq1  AGTGGAAAAGTAGCCTTTGGATAGTTTGTGGCCTTGAATCAGGAACAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAAGTAGCCTTTGGATAGTTTGTGGCCTTGAATCAGGAACAACC  400

seq1  CGGCAGTAGAGAAGTACTGTTGCGAGGTGCAAAATGTGATTTACTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGTAGAGAAGTACTGTTGCGAGGTGCAAAATGTGATTTACTAAAAA  450

seq1  TTAAACGGACAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACGGACAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGTCA  500

seq1  GAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGT  550

seq1  TCCAGGACAGCCACAGATACACAGAGAAACTCTGTCTCAAAAAACAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCACAGATACACAGAGAAACTCTGTCTCAAAAAACAAACA  600

seq1  AAACAAAAAACAACAACAAAAACCCCCAAACAAACAAAAATTACTGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAACAACAACAAAAACCCCCAAACAAACAAAAATTACTGTCAG  650

seq1  TCTGTTTAGTGCTTGGCTTATTAGAAAGGAGCTGTATTCATGTCTGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTAGTGCTTGGCTTATTAGAAAGGAGCTGTATTCATGTCTGCTTT  700

seq1  TCG-TTCTGTCTTCAAGAAAGTTATTTTGGTTGAAGTGTGTGTACAAAAC  749
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTCTGTCTTCAAGAAAGTTATTTTGGTTGAAGTGTGTGTACAAAAC  750

seq1  CTAGTCAG-AAGTAGAGGACTG-TTTTGGTAGCTGGAGATGTTCTTTGTG  797
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  CTAGTCAGAAAGTAGAGGACTGTTTTTGGTAGCTGGAGATGTTCTTTGTG  800

seq1  A-TTGCACCAAAAGCTAGC-ACATACCAG-TTTCTTCAGGTTCTGTGGCA  844
      | ||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  ATTTGCACCAAAAGCTAGCAACATACCAGTTTTCTTCAGGTTCTGTGGCA  850

seq1  GTGTGCAATCTAAAA-CCGAGAGCGTTGTCTTCCCTTACGTTCAAGG-CC  892
      ||||||||||||||| ||||||||||||||||||||||||||||||| ||
seq2  GTGTGCAATCTAAAACCCGAGAGCGTTGTCTTCCCTTACGTTCAAGGCCC  900

seq1  ATGAGTCCGAC-TAAGTGCTGAGGGG-AGC-TTTTGCCCATTCCT-GGCT  938
      ||||||||||| |||||||||||||| ||| ||||||| ||| || ||||
seq2  ATGAGTCCGACTTAAGTGCTGAGGGGAAGCTTTTTGCCTATTTCTGGGCT  950

seq1  CTG-TTTTGTGAT-CTCTGTTTGC-TACTTA-GGAGCTAG-TGGT-AACT  982
      ||| ||||||||| |||||||||| |||||| |||||||| |||| ||||
seq2  CTGTTTTTGTGATCCTCTGTTTGCTTACTTAGGGAGCTAGTTGGTAAACT  1000

seq1  CGCA-GTTCATCTCCTAAATATGG-ATATACTGAATTA-GGCAGCATCAT  1029
      |||| ||||||||||||||||||| ||||||||||||| |||||||||||
seq2  CGCAGGTTCATCTCCTAAATATGGAATATACTGAATTAGGGCAGCATCAT  1050

seq1  ATATTACACTT--ATTAAACACAGATCTGGTCAGAAA-TGTCCTGAGAAG  1076
      |||||||||||   ||||||||||||||||||||||| ||||||||||||
seq2  ATATTACACTTTATTTAAACACAGATCTGGTCAGAAATTGTCCTGAGAAG  1100

seq1  TCCTAAGTATTGAAAAGTTGTC  1098
      ||||||||||||||||||||||
seq2  TCCTAAGTATTGAAAAGTTGTC  1122