BAC Information

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BAC

Clone NameB6Ng01-232H08
Chromosome1 (Build37)
Map Location 102,564,587 - 102,565,787
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC633295, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232H08.bB6Ng01-232H08.g
ACCGA044793GA044794
length1,1851,156
definitionB6Ng01-232H08.b B6Ng01-232H08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagaaagagatcaaggcaggaaaatgaaggcagtagcaggagt
aaagttcatgcaggaatgcttcttattttctttattcttttagcttgctc
ggcctgcttttatctagaagccagggccagcagcccaatagtgatactat
ccacagttagctggcccctcctaaatcaatcttcaatcaaggacacacac
cataggtttgcctaaagaccagtatggtaggtgcattttcttaggtgatg
tttccttttccaaaatgactctagcctgttcaagtagacatgaaacaaac
caatataacaagtataagatattacattaattttcttgggtaacaagaat
aagcatctattcattcttcatagggcactgatgaatgaccaaagtaacca
tttcatcaaagtccaacctgggaaactaatgattttatgagccttaatta
aagaacatgagtaaagggctacctacagtagcaaaagagcttcaaaacta
caaagtaccatcttcataggaactgcatcatagaatcacactctcaacct
tacacttcctacatatactatgcttggaggagagaaatgataacacaggt
tatcatatgatgttttcttgctgtgtgtattacttagggttcaaatcagt
gatttctgccatctcaaattatcagcatctcagtatagtaataatatccc
aaatgtatttctactttccccatacataaaatataccatgtccctctgta
gccaccgactgtccaacagaagctctgtgatcacttctgcagtatcacta
tgctctagcacttattgagtagttagttctaatctttccttcttttatcc
tcagttgttgctgatttttagaacctgccttccacatttaaaggatccag
tcagataccgcagcctgatagactcagcatacattctctccataactgtc
tgcagagaatgtatgttgggctagttttaaatcaacttgacatagctaga
gtcaatagagaggagggaccctctgtgaaaatacctcatagatcagatag
ggcaagatgcaggtattttctaaatagcattgatggtcgagtcccagaca
tcgtgggatgatcaatctctggggtctgagctataggaatcaggctaaaa
gccaagggcaagcagaatgggaacattccctccat

gaattcacgcagttgaatccttctcaacagtctgtgttacgggaacactt
cattaccaccgttccccagctgaggagttctgaatccacaccggatcctt
ctcaacagtctgttttacgggaacacttcattaccatgacccgcagttct
ggttccggaatgagggatcttccttgcgccagtgatggtaaccttcccag
gtcttctcgtcccaggtcttctcgtcccaggtcttctcgtcccaggtctt
ctcgtcccgggtcttctcgtcccgggtctcagcaccaactcttacacgcg
ttctcgcgaccggccaggaagaacacaacaaaccggaatcttctgcggca
aaagctttattgcttacatcttcaggagccagagagcaagagagcaagaa
tgcaagagcaagagagagcaagaaagcaagaaagcaagaaaaagaacaag
aacaagaaagcaagagagagaatggcaaaaccccgtcccttttaaggaga
attatcctccgcctaggacgtgtcactccctgattggctgcagcccatcg
gcccagttgtcatcacgggaaaggcagaacacatggcgggaaaactgccc
ctgcatgtgtgcagattatgtttaccacttagaacacagctgtcagcgcc
atcttgtaatggcaaatgtgagggcggctcctcacaacagtcagcagaat
gtttatgtcccactgcacttgacatgccaccatactgttacaatgataga
atacttggtctttgagcttcatgaataccaagcagctgaataagactaat
gtcctaacaaaagattcctagagaaaactttgaacacatcatgagaatgc
agtgagaaacatattctcatcactcactgaatctgcatttatcttgggct
tttccatcttcagaacactgagaaataaacttcatctcttctctctctct
ctcttctctctctctctctctcctctctctctttttttttataaatcctg
caccctgtggtatttggaataatctgtgtgaaactaagacaatttttcca
taacgcttgctgagggctggctattctaaatatcattaactctgtttgca
aggctagtctcccaattgcctaccatccatccaatcatgttttattaaat
aatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102564587_102565787
seq2: B6Ng01-232H08.b_45_1229 (reverse)

seq1  ATGGAGGG-ATGCT-CCATTCTGGCTTGCCCCTTGTGGCTTTTTTAGCCT  48
      |||||||| ||| | ||||||| ||||||||    ||||  |||||||||
seq2  ATGGAGGGAATGTTCCCATTCT-GCTTGCCC---TTGGC--TTTTAGCCT  44

seq1  GATTTCTTATAAAGCTCAGGAACCCCAGAGATGGATCAACCCACGATGGT  98
      |||| |   || |||||||  ||||||||||| ||||| |||||||| ||
seq2  GATTCC---TATAGCTCAG--ACCCCAGAGATTGATCATCCCACGAT-GT  88

seq1  CTGGGAACTCCGACATCAATGCCTATTTAAGAAAATACCCTGCATTCTTG  148
      ||||| ||||   |||||||| |||||| |||||||| |||||| |||||
seq2  CTGGG-ACTCGACCATCAATG-CTATTT-AGAAAATA-CCTGCA-TCTTG  133

seq1  CCCTATCTGATCTTATTGAGGTATTTTCACAGAGGGTCCCTCCTCTCTAT  198
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  CCCTATCTGATCT--ATGAGGTATTTTCACAGAGGGTCCCTCCTCTCTAT  181

seq1  TGACTCTAGCTTATGTCAAGTTGATTTAAAACTAG-CCAACATACATTCT  247
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  TGACTCTAGC-TATGTCAAGTTGATTTAAAACTAGCCCAACATACATTCT  230

seq1  CTGCAGACAGTTATGGAGAGAATGTATGCTGAGTCTATCAGGCTGCGGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGACAGTTATGGAGAGAATGTATGCTGAGTCTATCAGGCTGCGGTA  280

seq1  TCTGACTGGATCC-TTAAATGTGGAAGGCAGGTTCTAAAAATCAGCAACA  346
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGGATCCTTTAAATGTGGAAGGCAGGTTCTAAAAATCAGCAACA  330

seq1  ACTGAGGATAAAAGAAGGAAAGATTAGAACTAACTACTCAATAAGTGCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGATAAAAGAAGGAAAGATTAGAACTAACTACTCAATAAGTGCTA  380

seq1  GAGCATAGTGATACTGCAGAAGTGATCACAGAGCTTCTGTTGGACAGTCG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATAGTGATACTGCAGAAGTGATCACAGAGCTTCTGTTGGACAGTCG  430

seq1  GTGGCTACAGAGGGACATGGTATATTTTATGTATGGGGAAAGTAGAAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTACAGAGGGACATGGTATATTTTATGTATGGGGAAAGTAGAAATA  480

seq1  CATTTGGGATATTATTACTATACTGAGATGCTGATAATTTGAGATGGCAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGATATTATTACTATACTGAGATGCTGATAATTTGAGATGGCAG  530

seq1  AAATCACTGATTTGAACCCTAAGTAATACACACAGCAAGAAAACATCATA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACTGATTTGAACCCTAAGTAATACACACAGCAAGAAAACATCATA  580

seq1  TGATAACCTGTGTTATCATTTCTCTCCTCCAAGCATAGTATATGTAGGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAACCTGTGTTATCATTTCTCTCCTCCAAGCATAGTATATGTAGGAA  630

seq1  GTGTAAGGTTGAGAGTGTGATTCTATGATGCAGTTCCTATGAAGATGGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGGTTGAGAGTGTGATTCTATGATGCAGTTCCTATGAAGATGGTA  680

seq1  CTTTGTAGTTTTGAAGCTCTTTTGCTACTGTAGGTAGCCCTTTACTCATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGTTTTGAAGCTCTTTTGCTACTGTAGGTAGCCCTTTACTCATG  730

seq1  TTCTTTAATTAAGGCTCATAAAATCATTAGTTTCCCAGGTTGGACTTTGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAATTAAGGCTCATAAAATCATTAGTTTCCCAGGTTGGACTTTGA  780

seq1  TGAAATGGTTACTTTGGTCATTCATCAGTGCCCTATGAAGAATGAATAGA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGTTACTTTGGTCATTCATCAGTGCCCTATGAAGAATGAATAGA  830

seq1  TGCTTATTCTTGTTACCCAAGAAAATTAATGTAATATCTTATACTTGTTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATTCTTGTTACCCAAGAAAATTAATGTAATATCTTATACTTGTTA  880

seq1  TATTGGTTTGTTTCATGTCTACTTGAACAGGCTAGAGTCATTTTGGAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTTGTTTCATGTCTACTTGAACAGGCTAGAGTCATTTTGGAAAA  930

seq1  GGAAACATCACCTAAGAAAATGCACCTACCATACTGGTCTTTAGGCAAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATCACCTAAGAAAATGCACCTACCATACTGGTCTTTAGGCAAAC  980

seq1  CTATGGTGTGTGTCCTTGATTGAAGATTGATTTAGGAGGGGCCAGCTAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGTGTGTCCTTGATTGAAGATTGATTTAGGAGGGGCCAGCTAAC  1030

seq1  TGTGGATAGTATCACTATTGGGCTGCTGGCCCTGGCTTCTAGATAAAAGC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAGTATCACTATTGGGCTGCTGGCCCTGGCTTCTAGATAAAAGC  1080

seq1  AGGCCGAGCAAGCTAAAAGAATAAAGAAAATAAGAAGCATTCCTGCATGA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCGAGCAAGCTAAAAGAATAAAGAAAATAAGAAGCATTCCTGCATGA  1130

seq1  ACTTTACTCCTGCTACTGCCTTCATTTTCCTGCCTTGATCTCTTTCTCTG  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTACTCCTGCTACTGCCTTCATTTTCCTGCCTTGATCTCTTTCTCTG  1180

seq1  AATTC  1201
      |||||
seq2  AATTC  1185


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