BAC Information

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BAC

Clone NameB6Ng01-233F08
Chromosome1 (Build37)
Map Location 129,435,004 - 129,435,500
singlet/doubletsinglet
Overlap geneTmem163
Upstream geneE030049G20Rik, LOC383559, Mgat5, LOC667090
Downstream geneAcmsd, Ccnt2, Ysk4, Rab3gap1, Zranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233F08.bB6Ng01-233F08.g
ACCGA045426GA045427
length543491
definitionB6Ng01-233F08.b B6Ng01-233F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttaatcctcacactttgggaacccagccattttcaagccactctgtcat
gtagaagagatgaaacctgccttccatctagctgatcacgacagacagat
cagtgtccacactagtgatgctctttcccaatcctcaggatccatgaata
cattactgtacaggaccagagggagatgtgctgatgtcttccaggatatc
aagaaggaaatcacggtggactgtctaggaatgccggtgagagcaggaga
gtcctagtccacaagaaggggagggtcagaatcagaggaggcgtgaggac
agagggatgaaggtacaggaagggggttttgatgtcacagcaggctaagc
cccaccagtagcttcttccaggtggaaaagaaaaattcatttctccctgc
ggctcacaatgggaacctatgcctgcctggactttaatttaggtcagtga
gacctattagtccagaactttaagctgacatgagtgtgttctttacatgt
atgcatgcatgtatgtatgtatgtatgtatgtatgtatgttga
ataccggagcagtaagatggttcacagcttaaaataacagaactgaagca
atccggagcccctgatacactgttaaatagtgccaagagcaaaactctaa
agtcactaaaaagaacagattgggtatataggaaagagatctgggaaatg
ttcttggctttgagttgagagataagtgggttacagagcgatatgtggag
aaaggtctaattttcattttcatacctagctacatgtgtgtgagaacagc
atatacatgtatgtatgttctatttgatttgcaaaggaaatacactggaa
gctcgggtactagctcgtggtgatcgccatttacagaggggggtgggtgg
gaaggatgcaatcagggtaaccagggattagggaaccctctgaaatctgc
cttcatagctaagcagttacttttcacatatgcaccgcaacaatatttgg
cagcatgaatgaaacgtattcttttttcttttgaagaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_129435004_129435500
seq2: B6Ng01-233F08.g_68_564

seq1  GAATTCATACCGGAGCAGTAAGATGGTTCACAGCTTAAAATAACAGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCGGAGCAGTAAGATGGTTCACAGCTTAAAATAACAGAACT  50

seq1  GAAGCAATCCGGAGCCCCTGATACACTGTTAAATAGTGCCAAGAGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAATCCGGAGCCCCTGATACACTGTTAAATAGTGCCAAGAGCAAAA  100

seq1  CTCTAAAGTCACTAAAAAGAACAGATTGGGTATATAGGAAAGAGATCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGTCACTAAAAAGAACAGATTGGGTATATAGGAAAGAGATCTGG  150

seq1  GAAATGTTCTTGGCTTTGAGTTGAGAGATAAGTGGGTTACAGAGCGATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTTCTTGGCTTTGAGTTGAGAGATAAGTGGGTTACAGAGCGATAT  200

seq1  GTGGAGAAAGGTCTAATTTTCATTTTCATACCTAGCTACATGTGTGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAAGGTCTAATTTTCATTTTCATACCTAGCTACATGTGTGTGAG  250

seq1  AACAGCATATACATGTATGTATGTTCTATTTGATTTGCAAAGGAAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATATACATGTATGTATGTTCTATTTGATTTGCAAAGGAAATACA  300

seq1  CTGGAAGCTCGGGTACTAGCTCGTGGTGATCGCCATTTACAGAGGGGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGCTCGGGTACTAGCTCGTGGTGATCGCCATTTACAGAGGGGGGT  350

seq1  GGGTGGGAAGGATGCAATCAGGGTAACCAGGGATTAGGGAACCCTCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAAGGATGCAATCAGGGTAACCAGGGATTAGGGAACCCTCTGAA  400

seq1  ATCTGTCTTCATAGCTAAGCAGTTACTTTTCACATATGCACCGCAACAAT  450
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTTCATAGCTAAGCAGTTACTTTTCACATATGCACCGCAACAAT  450

seq1  ATTTGGCAGCATGAATGAAACGTATTCTTTTTTCTTTTGAAGAAACA  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCAGCATGAATGAAACGTATTCTTTTTTCTTTTGAAGAAACA  497